RNA–Protein interactions for RNA: ENST00000520513.1

LINC00535-204, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 305 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-204ENST00000520513 CCSER2Q9H7U1 834 aa8.14□□□□□ -1.11
LINC00535-204ENST00000520513 GGT7Q9UJ14 662 aa8.14□□□□□ -1.11
LINC00535-204ENST00000520513 GREM1O60565 184 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 GDNFP39905 211 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 MPP2Q14168 576 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 USP48Q86UV5 1035 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 ZNF654Q8IZM8 581 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 CCDC120Q96HB5 630 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 ALPK1Q96QP1 1244 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 SLAMF8Q9P0V8 285 aa8.13□□□□□ -1.11
LINC00535-204ENST00000520513 DDX41Q9UJV9 622 aaKnown RBP8.13□□□□□ -1.11
LINC00535-204ENST00000520513 SHISA3A0PJX4 238 aa8.12□□□□□ -1.11
LINC00535-204ENST00000520513 TPP2P29144 1249 aaPredicted RBP8.12□□□□□ -1.11
LINC00535-204ENST00000520513 NAALADL2Q58DX5 795 aa8.12□□□□□ -1.11
LINC00535-204ENST00000520513 VWCEQ96DN2 955 aa8.12□□□□□ -1.11
LINC00535-204ENST00000520513 ADAMTS10Q9H324 1103 aa8.12□□□□□ -1.11
LINC00535-204ENST00000520513 SP110Q9HB58 689 aa8.12□□□□□ -1.11
LINC00535-204ENST00000520513 ADAMTS1Q9UHI8 967 aa8.12□□□□□ -1.11
LINC00535-204ENST00000520513 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.12□□□□□ -1.11
LINC00535-204ENST00000520513 LRRC10BA6NIK2 292 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 YARSP54577 528 aaKnown RBP8.11□□□□□ -1.11
LINC00535-204ENST00000520513 GNL2Q13823 731 aaKnown RBP8.11□□□□□ -1.11
LINC00535-204ENST00000520513 PKN1Q16512 942 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 CREG2Q8IUH2 290 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 KSR1Q8IVT5 923 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 BHLHE22Q8NFJ8 381 aaPredicted RBP8.11□□□□□ -1.11
LINC00535-204ENST00000520513 RNF141Q8WVD5 230 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 KIRREL1Q96J84 757 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 KREMEN1Q96MU8 473 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 SLC38A3Q99624 504 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 KIF2CQ99661 725 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 GPR62Q9BZJ7 368 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 KCNK12Q9HB15 430 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 BRMS1Q9HCU9 246 aa8.11□□□□□ -1.11
LINC00535-204ENST00000520513 GLI1P08151 1106 aa8.1□□□□□ -1.11
LINC00535-204ENST00000520513 EIF4A3P38919 411 aaKnown RBP8.1□□□□□ -1.11
LINC00535-204ENST00000520513 SF3A1Q15459 793 aaKnown RBP8.1□□□□□ -1.11
LINC00535-204ENST00000520513 MLANAQ16655 118 aa8.1□□□□□ -1.11
LINC00535-204ENST00000520513 PRR23BQ6ZRT6 265 aa8.1□□□□□ -1.11
LINC00535-204ENST00000520513 TMPRSS7Q7RTY8 843 aa8.1□□□□□ -1.11
LINC00535-204ENST00000520513 SLC43A3Q8NBI5 491 aa8.1□□□□□ -1.11
LINC00535-204ENST00000520513 SREK1Q8WXA9 508 aaKnown RBP8.1□□□□□ -1.11
LINC00535-204ENST00000520513 FAM84AQ96KN4 292 aa8.1□□□□□ -1.11
LINC00535-204ENST00000520513 LRRC3Q9BY71 257 aa8.1□□□□□ -1.11
LINC00535-204ENST00000520513 SLC22A31A6NKX4 558 aa8.09□□□□□ -1.11
LINC00535-204ENST00000520513 DBX1A6NMT0 343 aa8.09□□□□□ -1.11
LINC00535-204ENST00000520513 UBOX5O94941 541 aa8.09□□□□□ -1.11
LINC00535-204ENST00000520513 TTC6Q86TZ1 520 aa8.09□□□□□ -1.11
LINC00535-204ENST00000520513 TSPYL5Q86VY4 417 aaPredicted RBP8.09□□□□□ -1.11
LINC00535-204ENST00000520513 ZNF296Q8WUU4 475 aaPredicted RBP8.09□□□□□ -1.11
LINC00535-204ENST00000520513 EBF1Q9UH73 591 aa8.09□□□□□ -1.11
LINC00535-204ENST00000520513 TRHRP34981 398 aaPredicted RBP8.08□□□□□ -1.12
LINC00535-204ENST00000520513 HK2P52789 917 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 CILP2Q8IUL8 1156 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 CCDC74BQ96LY2 380 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 TINF2Q9BSI4 451 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 UBP1Q9NZI7 540 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 TMEM59LQ9UK28 342 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 PCDHB14Q9Y5E9 798 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 PCDHA11Q9Y5I1 949 aa8.08□□□□□ -1.12
LINC00535-204ENST00000520513 POLR2BP30876 1174 aaKnown RBP8.07□□□□□ -1.12
LINC00535-204ENST00000520513 RACK1P63244 317 aaKnown RBP8.07□□□□□ -1.12
LINC00535-204ENST00000520513 ZNF394Q53GI3 561 aa8.07□□□□□ -1.12
LINC00535-204ENST00000520513 ARSHQ5FYA8 562 aa8.07□□□□□ -1.12
LINC00535-204ENST00000520513 DUSP13Q9UII6 198 aa8.07□□□□□ -1.12
LINC00535-204ENST00000520513 ATE1O95260 518 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 KRT1P04264 644 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 TNNI2P48788 182 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 EGR3Q06889 387 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 TIGD5Q53EQ6 642 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 PHACTR4Q8IZ21 702 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 DRC1Q96MC2 740 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 TRIT1Q9H3H1 467 aaKnown RBP8.06□□□□□ -1.12
LINC00535-204ENST00000520513 ACBD3Q9H3P7 528 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 ANTXR1Q9H6X2 564 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 SUPT16HQ9Y5B9 1047 aaKnown RBP8.06□□□□□ -1.12
LINC00535-204ENST00000520513 PCDHGB7Q9Y5F8 929 aa8.06□□□□□ -1.12
LINC00535-204ENST00000520513 RGS13O14921 159 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 HPXP02790 462 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 ZGLP1P0C6A0 271 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 CLCQ05315 142 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 TMEM67Q5HYA8 995 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 OVOS1Q6IE37 1185 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 SPATA32Q96LK8 384 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 CAPN10Q9HC96 672 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 GPATCH2Q9NW75 528 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 INPP5FQ9Y2H2 1132 aa8.05□□□□□ -1.12
LINC00535-204ENST00000520513 GJA8P48165 433 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
LINC00535-204ENST00000520513 SEZ6Q53EL9 994 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 MPZL3Q6UWV2 235 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 PPP1R16BQ96T49 567 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 ASPNQ9BXN1 380 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 C19orf44Q9H6X5 657 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 EHMT1Q9H9B1 1298 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 USP35Q9P2H5 1018 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 KCNH3Q9ULD8 1083 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 ROBO2Q9HCK4 1378 aa8.04□□□□□ -1.12
LINC00535-204ENST00000520513 EFEMP2O95967 443 aa8.03□□□□□ -1.12
LINC00535-204ENST00000520513 RAC2P15153 192 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms