RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 PHKBQ93100 1093 aa16.05■□□□□ 0.16
ABCC3-216ENST00000515585 ABHD8Q96I13 439 aa16.05■□□□□ 0.16
ABCC3-216ENST00000515585 TMEM39BQ9GZU3 492 aa16.05■□□□□ 0.16
ABCC3-216ENST00000515585 NYAP2Q9P242 653 aa16.05■□□□□ 0.16
ABCC3-216ENST00000515585 MAD2L2Q9UI95 211 aa16.05■□□□□ 0.16
ABCC3-216ENST00000515585 PHIPQ8WWQ0 1821 aa16.05■□□□□ 0.16
ABCC3-216ENST00000515585 DEXIO95424 95 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 SMARCA1P28370 1054 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 TNNI2P48788 182 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 SSRP1Q08945 709 aaKnown RBP16.04■□□□□ 0.16
ABCC3-216ENST00000515585 TNFAIP1Q13829 316 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 CERKLQ49MI3 558 aaPredicted RBP16.04■□□□□ 0.16
ABCC3-216ENST00000515585 TMEM179Q6ZVK1 233 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 ZSCAN29Q8IWY8 852 aaPredicted RBP16.04■□□□□ 0.16
ABCC3-216ENST00000515585 SRBD1Q8N5C6 995 aaKnown RBP16.04■□□□□ 0.16
ABCC3-216ENST00000515585 TMEM87AQ8NBN3 555 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 TRPM4Q8TD43 1214 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 L3MBTL3Q96JM7 780 aaPredicted RBP16.04■□□□□ 0.16
ABCC3-216ENST00000515585 VEZTQ9HBM0 779 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 SYNPO2Q9UMS6 1093 aa16.04■□□□□ 0.16
ABCC3-216ENST00000515585 VPS37CA5D8V6 355 aaPredicted RBP16.03■□□□□ 0.16
ABCC3-216ENST00000515585 DDX11L8A8MPP1 907 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 UBE2Q2LH0YL09 131 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 H7C1D1 291 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 TTLL1O95922 423 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 KIF5BP33176 963 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 LBX1P52954 281 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 HIRAP54198 1017 aaPredicted RBP16.03■□□□□ 0.16
ABCC3-216ENST00000515585 MLLT1Q03111 559 aaPredicted RBP16.03■□□□□ 0.16
ABCC3-216ENST00000515585 RASA3Q14644 834 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
ABCC3-216ENST00000515585 TBC1D10BQ4KMP7 808 aaPredicted RBP16.03■□□□□ 0.16
ABCC3-216ENST00000515585 CHADLQ6NUI6 762 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 CTCFLQ8NI51 663 aaPredicted RBP16.03■□□□□ 0.16
ABCC3-216ENST00000515585 SHISA4Q96DD7 197 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 CHAMP1Q96JM3 812 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 AIFM3Q96NN9 605 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 HACL1Q9UJ83 578 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 STX8Q9UNK0 236 aa16.03■□□□□ 0.16
ABCC3-216ENST00000515585 PITPNM2Q9BZ72 1349 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 PPFIA3O75145 1194 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 DDNO94850 711 aaPredicted RBP16.02■□□□□ 0.16
ABCC3-216ENST00000515585 PDHBP11177 359 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 EPS15P42566 896 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 GNAQP50148 359 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 FOXD4L5Q5VV16 416 aaPredicted RBP16.02■□□□□ 0.16
ABCC3-216ENST00000515585 DPY19L2Q6NUT2 758 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 CLEC10AQ8IUN9 316 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 STAG2Q8N3U4 1231 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 FOXD4L4Q8WXT5 416 aaPredicted RBP16.02■□□□□ 0.16
ABCC3-216ENST00000515585 C8orf76Q96K31 380 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 ALG1Q9BT22 464 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 SPZ1Q9BXG8 430 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 SLC26A6Q9BXS9 759 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 ZSCAN16Q9H4T2 348 aaPredicted RBP16.02■□□□□ 0.16
ABCC3-216ENST00000515585 KANSL2Q9H9L4 492 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 WBP1LQ9NX94 342 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 ATP6V1DQ9Y5K8 247 aa16.02■□□□□ 0.16
ABCC3-216ENST00000515585 SSC5DA1L4H1 1573 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 OTOFQ9HC10 1997 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 PHF20L1A8MW92 1017 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 ABCB5Q2M3G0 1257 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 RASGRP2Q7LDG7 609 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 APOBEC3FQ8IUX4 373 aaKnown RBP16.01■□□□□ 0.15
ABCC3-216ENST00000515585 TRIM22Q8IYM9 498 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 CMTR1Q8N1G2 835 aaKnown RBP16.01■□□□□ 0.15
ABCC3-216ENST00000515585 WASF1Q92558 559 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 LZTS2Q9BRK4 669 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.01■□□□□ 0.15
ABCC3-216ENST00000515585 GJB4Q9NTQ9 266 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 LMBRD1Q9NUN5 540 aa16.01■□□□□ 0.15
ABCC3-216ENST00000515585 CYTH3O43739 400 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 VEGFBP49765 207 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 RGS19P49795 217 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 SEPT2Q15019 361 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 RBM26Q5T8P6 1007 aaKnown RBP16■□□□□ 0.15
ABCC3-216ENST00000515585 KRT40Q6A162 431 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 GINM1Q9NU53 330 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 RBM27Q9P2N5 1060 aaKnown RBP16■□□□□ 0.15
ABCC3-216ENST00000515585 PPP2R3BQ9Y5P8 575 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 PARP14Q460N5 1801 aa16■□□□□ 0.15
ABCC3-216ENST00000515585 H3BQV1 296 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 EEF2P13639 858 aaKnown RBP15.99■□□□□ 0.15
ABCC3-216ENST00000515585 PTMSP20962 102 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 KIF23Q02241 960 aaPredicted RBP15.99■□□□□ 0.15
ABCC3-216ENST00000515585 NPY5RQ15761 445 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 PFKFB3Q16875 520 aaPredicted RBP15.99■□□□□ 0.15
ABCC3-216ENST00000515585 ASPRV1Q53RT3 343 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 OTUD7BQ6GQQ9 843 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 FERMT3Q86UX7 667 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 FAM177A1Q8N128 213 aaPredicted RBP15.99■□□□□ 0.15
ABCC3-216ENST00000515585 LRRC47Q8N1G4 583 aaKnown RBP15.99■□□□□ 0.15
ABCC3-216ENST00000515585 GMCL1P1Q8NEA9 526 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 TRIM34Q9BYJ4 488 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 DEFB129Q9H1M3 183 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 RIOX1Q9H6W3 641 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 ADARB2Q9NS39 739 aaKnown RBP15.99■□□□□ 0.15
ABCC3-216ENST00000515585 CLIP2Q9UDT6 1046 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 ZBTB21Q9ULJ3 1066 aa15.99■□□□□ 0.15
ABCC3-216ENST00000515585 USP17L5A8MUK1 530 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms