RNA–Protein interactions for RNA: ENST00000510129.5

UBE2D3-229, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 3

Gene UBE2D3, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-229ENST00000510129 FAM227BQ96M60 508 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 TANGO6Q9C0B7 1094 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 DIAPH3Q9NSV4 1193 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 NYAP2Q9P242 653 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 RBPJLQ9UBG7 517 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 ZMYM6O95789 1325 aa25.37■■□□□ 1.65
UBE2D3-229ENST00000510129 A0A0D9SFI3 127 aa25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 FLT3LGP49771 235 aa25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 UBXN2AP68543 259 aa25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 NMIQ13287 307 aaPredicted RBP25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 CCDC129Q6ZRS4 1044 aa25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 SIAH1Q8IUQ4 282 aa25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 MB21D1Q8N884 522 aa25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 CCDC171Q6TFL3 1326 aa25.36■■□□□ 1.65
UBE2D3-229ENST00000510129 GREB1LQ9C091 1923 aaPredicted RBP25.35■■□□□ 1.65
UBE2D3-229ENST00000510129 ATP2B2Q01814 1243 aa25.35■■□□□ 1.65
UBE2D3-229ENST00000510129 SOCS4Q8WXH5 440 aa25.35■■□□□ 1.65
UBE2D3-229ENST00000510129 ANAPC4Q9UJX5 808 aa25.35■■□□□ 1.65
UBE2D3-229ENST00000510129 RBBP6Q7Z6E9 1792 aaKnown RBP25.35■■□□□ 1.65
UBE2D3-229ENST00000510129 PLIN4Q96Q06 1357 aa25.34■■□□□ 1.65
UBE2D3-229ENST00000510129 TSPY3P0CV98 308 aa25.34■■□□□ 1.65
UBE2D3-229ENST00000510129 TSPY8P0CW00 308 aa25.34■■□□□ 1.65
UBE2D3-229ENST00000510129 STK11IPQ8N1F8 1099 aa25.34■■□□□ 1.65
UBE2D3-229ENST00000510129 PAGR1Q9BTK6 254 aa25.34■■□□□ 1.65
UBE2D3-229ENST00000510129 TXNRD2Q9NNW7 524 aa25.34■■□□□ 1.65
UBE2D3-229ENST00000510129 ADCY3O60266 1144 aa25.33■■□□□ 1.65
UBE2D3-229ENST00000510129 NEDD1Q8NHV4 660 aa25.33■■□□□ 1.65
UBE2D3-229ENST00000510129 SH3TC2Q8TF17 1288 aa25.33■■□□□ 1.65
UBE2D3-229ENST00000510129 GNL3Q9BVP2 549 aaKnown RBP eCLIP25.33■■□□□ 1.65
UBE2D3-229ENST00000510129 CWC22Q9HCG8 908 aaKnown RBP25.33■■□□□ 1.65
UBE2D3-229ENST00000510129 BIN2Q9UBW5 565 aaPredicted RBP25.33■■□□□ 1.65
UBE2D3-229ENST00000510129 GABRQQ9UN88 632 aa25.33■■□□□ 1.65
UBE2D3-229ENST00000510129 SPDYE16A6NNV3 312 aaPredicted RBP25.32■■□□□ 1.64
UBE2D3-229ENST00000510129 FOXP2O15409 715 aa25.32■■□□□ 1.64
UBE2D3-229ENST00000510129 PRDM1O75626 825 aa25.32■■□□□ 1.64
UBE2D3-229ENST00000510129 HSPD1P10809 573 aaKnown RBP25.32■■□□□ 1.64
UBE2D3-229ENST00000510129 PCP11498 1178 aaKnown RBP25.32■■□□□ 1.64
UBE2D3-229ENST00000510129 CLEC10AQ8IUN9 316 aa25.32■■□□□ 1.64
UBE2D3-229ENST00000510129 NUDT12Q9BQG2 462 aa25.32■■□□□ 1.64
UBE2D3-229ENST00000510129 IGKV6D-41A0A0C4DH26 115 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 FLOT1O75955 427 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 TTLL1O95922 423 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 CAPN2P17655 700 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 NT5C2P49902 561 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 TTC22Q5TAA0 569 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 TRMT44Q8IYL2 757 aaKnown RBP25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 SPICE1Q8N0Z3 855 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 MKL1Q969V6 931 aa25.31■■□□□ 1.64
UBE2D3-229ENST00000510129 FGAP02671 866 aa25.3■■□□□ 1.64
UBE2D3-229ENST00000510129 TFAP4Q01664 338 aa25.3■■□□□ 1.64
UBE2D3-229ENST00000510129 VPS53Q5VIR6 699 aa25.3■■□□□ 1.64
UBE2D3-229ENST00000510129 NKX2-3Q8TAU0 364 aa25.3■■□□□ 1.64
UBE2D3-229ENST00000510129 MTMR4Q9NYA4 1195 aa25.3■■□□□ 1.64
UBE2D3-229ENST00000510129 ORC4O43929 436 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 XRCC5P13010 732 aaKnown RBP25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 PDE4AP27815 886 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 DSG3P32926 999 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 Q3C1V9 767 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 CWC27Q6UX04 472 aaKnown RBP25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 PLEKHH3Q7Z736 793 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 ZNF589Q86UQ0 364 aaPredicted RBP25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 CLIP2Q9UDT6 1046 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 GJD2Q9UKL4 321 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.29■■□□□ 1.641e-8■□□□□ 9.1
UBE2D3-229ENST00000510129 IVNS1ABPQ9Y6Y0 642 aa25.29■■□□□ 1.64
UBE2D3-229ENST00000510129 TSPY2A6NKD2 308 aa25.28■■□□□ 1.64
UBE2D3-229ENST00000510129 RAD21O60216 631 aa25.28■■□□□ 1.64
UBE2D3-229ENST00000510129 FGRP09769 529 aa25.28■■□□□ 1.64
UBE2D3-229ENST00000510129 KIAA1755Q5JYT7 1200 aa25.28■■□□□ 1.64
UBE2D3-229ENST00000510129 GPR142Q7Z601 462 aa25.28■■□□□ 1.64
UBE2D3-229ENST00000510129 CEP95Q96GE4 821 aa25.28■■□□□ 1.64
UBE2D3-229ENST00000510129 F5H6K3 240 aa25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 CNMDO75829 334 aa25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 RGS2P41220 211 aa25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 KLRC3Q07444 240 aa25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 GMCL1P1Q8NEA9 526 aa25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 SHCBP1Q8NEM2 672 aa25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 RUFY2Q8WXA3 655 aa25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 RNF41Q9H4P4 317 aaPredicted RBP25.27■■□□□ 1.64
UBE2D3-229ENST00000510129 HMGCRP04035 888 aa25.26■■□□□ 1.63
UBE2D3-229ENST00000510129 CTDSPL2Q05D32 466 aa25.26■■□□□ 1.63
UBE2D3-229ENST00000510129 POTEEQ6S8J3 1075 aa25.26■■□□□ 1.63
UBE2D3-229ENST00000510129 PORCNQ9H237 461 aa25.26■■□□□ 1.63
UBE2D3-229ENST00000510129 BTBD7Q9P203 1132 aa25.26■■□□□ 1.63
UBE2D3-229ENST00000510129 RAD50Q92878 1312 aa25.26■■□□□ 1.63
UBE2D3-229ENST00000510129 A0A0G2JMZ2 1700 aa25.26■■□□□ 1.63
UBE2D3-229ENST00000510129 POTEFA5A3E0 1075 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 SLC15A5A6NIM6 579 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 STRNO43815 780 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 FAM47AQ5JRC9 791 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 CENPQQ7L2Z9 268 aaPredicted RBP25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 DSCC1Q9BVC3 393 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 SPATC1LQ9H0A9 340 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 MROH8Q9H579 483 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 CTNNA3Q9UI47 895 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 ADAMTS5Q9UNA0 930 aa25.25■■□□□ 1.63
UBE2D3-229ENST00000510129 MYH4Q9Y623 1939 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 RANBP6O60518 1105 aaKnown RBP25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 NDUFB10O96000 172 aa25.24■■□□□ 1.63
UBE2D3-229ENST00000510129 INHAP05111 366 aa25.24■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms