RNA–Protein interactions for RNA: ENST00000505009.5

UBE2D3-218, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 2

Gene UBE2D3, Length 440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-218ENST00000505009 DNAJC25-GNG10A0A024R161 153 aa8.01□□□□□ -1.13
UBE2D3-218ENST00000505009 MLECQ14165 292 aa8.01□□□□□ -1.13
UBE2D3-218ENST00000505009 TMPRSS7Q7RTY8 843 aa8.01□□□□□ -1.13
UBE2D3-218ENST00000505009 ALPK1Q96QP1 1244 aa8.01□□□□□ -1.13
UBE2D3-218ENST00000505009 METTL5Q9NRN9 209 aaKnown RBP8.01□□□□□ -1.13
UBE2D3-218ENST00000505009 GPATCH2Q9NW75 528 aa8.01□□□□□ -1.13
UBE2D3-218ENST00000505009 KCNH3Q9ULD8 1083 aa8.01□□□□□ -1.13
UBE2D3-218ENST00000505009 ZNF165P49910 485 aa8□□□□□ -1.13
UBE2D3-218ENST00000505009 CDCP2Q5VXM1 449 aa8□□□□□ -1.13
UBE2D3-218ENST00000505009 TSPYL5Q86VY4 417 aaPredicted RBP8□□□□□ -1.13
UBE2D3-218ENST00000505009 REXO1Q8N1G1 1221 aaKnown RBP8□□□□□ -1.13
UBE2D3-218ENST00000505009 RNF34Q969K3 372 aa8□□□□□ -1.13
UBE2D3-218ENST00000505009 ASPNQ9BXN1 380 aa8□□□□□ -1.13
UBE2D3-218ENST00000505009 TRIT1Q9H3H1 467 aaKnown RBP8□□□□□ -1.13
UBE2D3-218ENST00000505009 CNNM2Q9H8M5 875 aa8□□□□□ -1.13
UBE2D3-218ENST00000505009 GOLGA2P5Q9HBQ8 144 aa8□□□□□ -1.13
UBE2D3-218ENST00000505009 DUSP13Q9UII6 198 aa8□□□□□ -1.13
UBE2D3-218ENST00000505009 UNCXA6NJT0 531 aa7.99□□□□□ -1.13
UBE2D3-218ENST00000505009 NLRC3Q7RTR2 1065 aa7.99□□□□□ -1.13
UBE2D3-218ENST00000505009 ZNF512BQ96KM6 892 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-218ENST00000505009 ADAMTS10Q9H324 1103 aa7.99□□□□□ -1.13
UBE2D3-218ENST00000505009 KIAA1522Q9P206 1035 aaPredicted RBP7.99□□□□□ -1.13
UBE2D3-218ENST00000505009 DDX41Q9UJV9 622 aaKnown RBP7.99□□□□□ -1.13
UBE2D3-218ENST00000505009 PCDHA11Q9Y5I1 949 aa7.99□□□□□ -1.13
UBE2D3-218ENST00000505009 VAMP1P23763 118 aa7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 GDNFP39905 211 aa7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 ERVFC1P60507 584 aa7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 EGR3Q06889 387 aa7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 SNW1Q13573 536 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 TTC6Q86TZ1 520 aa7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 METTL16Q86W50 562 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 ZSWIM9Q86XI8 627 aa7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 TMEM40Q8WWA1 233 aa7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 MRRFQ96E11 262 aaKnown RBP7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.98□□□□□ -1.13
UBE2D3-218ENST00000505009 ZNF503-AS2A6NEH8 195 aa7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 SCAMP3O14828 347 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 NME1P15531 152 aaKnown RBP7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 HK2P52789 917 aa7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 CHMP4BP1P59074 171 aa7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 KCNMB1Q16558 191 aa7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 C9orf131Q5VYM1 1079 aa7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 RGS22Q8NE09 1264 aa7.97□□□□□ -1.13
UBE2D3-218ENST00000505009 FAM86C2PA6NEL3 165 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 MEIS3P2A8K0S8 358 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 LTKP29376 864 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 AFMP43652 599 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 NBPF12Q5TAG4 269 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 TMC3Q7Z5M5 1100 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 TMEM192Q8IY95 271 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 LIN37Q96GY3 246 aaPredicted RBP7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 KIRREL1Q96J84 757 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 SLC9A7Q96T83 725 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 TMEM59LQ9UK28 342 aa7.96□□□□□ -1.14
UBE2D3-218ENST00000505009 NMIQ13287 307 aaPredicted RBP7.95□□□□□ -1.14
UBE2D3-218ENST00000505009 ZNF648Q5T619 568 aaPredicted RBP7.95□□□□□ -1.14
UBE2D3-218ENST00000505009 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.95□□□□□ -1.14
UBE2D3-218ENST00000505009 ZNRF3Q9ULT6 936 aa7.95□□□□□ -1.14
UBE2D3-218ENST00000505009 PPT2Q9UMR5 302 aa7.95□□□□□ -1.14
UBE2D3-218ENST00000505009 TNFRSF10CO14798 259 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 ACRP10323 421 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 TRHRP34981 398 aaPredicted RBP7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 HDLBPQ00341 1268 aaKnown RBP7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 CLEC16AQ2KHT3 1053 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 NBPF9Q3BBW0 867 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 LCE3BQ5TA77 95 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 KRTAP1-3Q8IUG1 177 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 POU5F2Q8N7G0 328 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 SLC6A18Q96N87 628 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 MINPP1Q9UNW1 487 aa7.94□□□□□ -1.14
UBE2D3-218ENST00000505009 CLEC3AO75596 197 aa7.93□□□□□ -1.14
UBE2D3-218ENST00000505009 ZGLP1P0C6A0 271 aa7.93□□□□□ -1.14
UBE2D3-218ENST00000505009 RNF4P78317 190 aa7.93□□□□□ -1.14
UBE2D3-218ENST00000505009 PAK2Q13177 524 aa7.93□□□□□ -1.14
UBE2D3-218ENST00000505009 LRRFIP1Q32MZ4 808 aaKnown RBP7.93□□□□□ -1.14
UBE2D3-218ENST00000505009 HDAC8Q9BY41 377 aa7.93□□□□□ -1.14
UBE2D3-218ENST00000505009 EBF1Q9UH73 591 aa7.93□□□□□ -1.14
UBE2D3-218ENST00000505009 GLI1P08151 1106 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 TEKQ02763 1124 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 FBXW10Q5XX13 1052 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 RUFY4Q6ZNE9 571 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 NT5DC4Q86YG4 428 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 ZNF654Q8IZM8 581 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 FERD3LQ96RJ6 166 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 PRDM14Q9GZV8 571 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 C19orf44Q9H6X5 657 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 SP110Q9HB58 689 aa7.92□□□□□ -1.14
UBE2D3-218ENST00000505009 LRRC10BA6NIK2 292 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 C8AP07357 584 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 CCNFP41002 786 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 MLANAQ16655 118 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 TMEM67Q5HYA8 995 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 CCDC81Q6ZN84 652 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 USHBP1Q8N6Y0 703 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 CCDC120Q96HB5 630 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 ASCC2Q9H1I8 757 aaPredicted RBP7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 GINM1Q9NU53 330 aa7.91□□□□□ -1.14
UBE2D3-218ENST00000505009 PRAMEF1O95521 474 aa7.9□□□□□ -1.14
UBE2D3-218ENST00000505009 HPXP02790 462 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms