RNA–Protein interactions for RNA: ENST00000498814.1

CPNE1-228, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 550 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-228ENST00000498814 R3HDMLQ9H3Y0 253 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 GOPCQ9HD26 462 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 PNMA3Q9UL41 463 aa18.37■□□□□ 0.53
CPNE1-228ENST00000498814 E7EWF7 191 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
CPNE1-228ENST00000498814 NMT2O60551 498 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 TLR2O60603 784 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 OSBPP22059 807 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 TRDNQ13061 729 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 ZSWIM5Q9P217 1185 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 CASP8AP2Q9UKL3 1982 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 TAF6LQ9Y6J9 622 aa18.36■□□□□ 0.53
CPNE1-228ENST00000498814 ADGRA2Q96PE1 1338 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L15C9J2P7 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L13C9JLJ4 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L11C9JVI0 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L18D6R9N7 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L22D6RA61 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L17D6RBQ6 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L19D6RCP7 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L20D6RJB6 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 CYP2C8P10632 490 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 LBX1P52954 281 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 USP17L24Q0WX57 530 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 CCDC178Q5BJE1 867 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 KIAA1755Q5JYT7 1200 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 RNF20Q5VTR2 975 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 STOX1Q6ZVD7 989 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 TTC14Q96N46 770 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 ASCC2Q9H1I8 757 aaPredicted RBP18.35■□□□□ 0.53
CPNE1-228ENST00000498814 STX8Q9UNK0 236 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 PARP14Q460N5 1801 aa18.35■□□□□ 0.53
CPNE1-228ENST00000498814 RLFQ13129 1914 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 F5H6K3 240 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 GPR25O00155 361 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 KLRC3Q07444 240 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 CATSPERGQ6ZRH7 1159 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 IQCA1Q86XH1 822 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 GMCL1P1Q8NEA9 526 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 NCOA7Q8NI08 942 aa18.34■□□□□ 0.53
CPNE1-228ENST00000498814 WDR46O15213 610 aaKnown RBP18.33■□□□□ 0.52
CPNE1-228ENST00000498814 IRX3P78415 501 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-228ENST00000498814 TSGA10IPQ3SY00 556 aa18.33■□□□□ 0.52
CPNE1-228ENST00000498814 RCSD1Q6JBY9 416 aa18.33■□□□□ 0.52
CPNE1-228ENST00000498814 C17orf99Q6UX52 265 aa18.33■□□□□ 0.52
CPNE1-228ENST00000498814 RALYLQ86SE5 291 aaKnown RBP18.33■□□□□ 0.52
CPNE1-228ENST00000498814 DGKHQ86XP1 1220 aa18.33■□□□□ 0.52
CPNE1-228ENST00000498814 SPICE1Q8N0Z3 855 aa18.33■□□□□ 0.52
CPNE1-228ENST00000498814 LRRC47Q8N1G4 583 aaKnown RBP18.33■□□□□ 0.52
CPNE1-228ENST00000498814 ZSCAN10Q96SZ4 725 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-228ENST00000498814 RPAP3Q9H6T3 665 aaPredicted RBP18.33■□□□□ 0.52
CPNE1-228ENST00000498814 PRDM10Q9NQV6 1147 aa18.33■□□□□ 0.52
CPNE1-228ENST00000498814 NDUFB10O96000 172 aa18.32■□□□□ 0.52
CPNE1-228ENST00000498814 TOP1P11387 765 aaKnown RBP18.32■□□□□ 0.52
CPNE1-228ENST00000498814 GCLCP48506 637 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-228ENST00000498814 CYB5R4Q7L1T6 521 aa18.32■□□□□ 0.52
CPNE1-228ENST00000498814 SMCR8Q8TEV9 937 aaPredicted RBP18.32■□□□□ 0.52
CPNE1-228ENST00000498814 ANKS1AQ92625 1134 aa18.32■□□□□ 0.52
CPNE1-228ENST00000498814 KCNB2Q92953 911 aa18.32■□□□□ 0.52
CPNE1-228ENST00000498814 P2RX7Q99572 595 aaKnown RBP18.32■□□□□ 0.52
CPNE1-228ENST00000498814 ZKSCAN3Q9BRR0 538 aa18.32■□□□□ 0.52
CPNE1-228ENST00000498814 RAD21O60216 631 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 EIF5BO60841 1220 aaKnown RBP18.31■□□□□ 0.52
CPNE1-228ENST00000498814 FKTNO75072 461 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 BCRP11274 1271 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 ZKSCAN1P17029 563 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-228ENST00000498814 HSPA4P34932 840 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 HERVK_113P62684 666 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 MB21D2Q8IYB1 491 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-228ENST00000498814 ZNF296Q8WUU4 475 aaPredicted RBP18.31■□□□□ 0.52
CPNE1-228ENST00000498814 TMEM47Q9BQJ4 181 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 UBAC1Q9BSL1 405 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 USP26Q9BXU7 913 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 CPA4Q9UI42 421 aa18.31■□□□□ 0.52
CPNE1-228ENST00000498814 SP3Q02447 781 aa18.3■□□□□ 0.52
CPNE1-228ENST00000498814 COG2Q14746 738 aa18.3■□□□□ 0.52
CPNE1-228ENST00000498814 SLFN13Q68D06 897 aa18.3■□□□□ 0.52
CPNE1-228ENST00000498814 RASEFQ8IZ41 740 aa18.3■□□□□ 0.52
CPNE1-228ENST00000498814 ENAHQ8N8S7 591 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-228ENST00000498814 GTF3C2Q8WUA4 911 aaPredicted RBP18.3■□□□□ 0.52
CPNE1-228ENST00000498814 GMCL1Q96IK5 515 aa18.3■□□□□ 0.52
CPNE1-228ENST00000498814 TANGO6Q9C0B7 1094 aa18.3■□□□□ 0.52
CPNE1-228ENST00000498814 HOXC10Q9NYD6 342 aa18.3■□□□□ 0.52
CPNE1-228ENST00000498814 TNKSO95271 1327 aa18.29■□□□□ 0.52
CPNE1-228ENST00000498814 MYPNQ86TC9 1320 aa18.29■□□□□ 0.52
CPNE1-228ENST00000498814 MGAMO43451 1857 aa18.29■□□□□ 0.52
CPNE1-228ENST00000498814 KRT32Q14532 448 aa18.29■□□□□ 0.52
CPNE1-228ENST00000498814 FAM83BQ5T0W9 1011 aa18.29■□□□□ 0.52
CPNE1-228ENST00000498814 LBX2Q6XYB7 198 aa18.29■□□□□ 0.52
CPNE1-228ENST00000498814 MTA3Q9BTC8 594 aa18.29■□□□□ 0.52
CPNE1-228ENST00000498814 FLOT1O75955 427 aa18.28■□□□□ 0.52
CPNE1-228ENST00000498814 ANTXR2P58335 489 aa18.28■□□□□ 0.52
CPNE1-228ENST00000498814 SEC23AQ15436 765 aa18.28■□□□□ 0.52
CPNE1-228ENST00000498814 FAM110CQ1W6H9 321 aa18.28■□□□□ 0.52
CPNE1-228ENST00000498814 NUP88Q99567 741 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-228ENST00000498814 MORF4L1Q9UBU8 362 aa18.28■□□□□ 0.52
CPNE1-228ENST00000498814 A0A0G2JMZ2 1700 aa18.28■□□□□ 0.52
CPNE1-228ENST00000498814 SPDYE16A6NNV3 312 aaPredicted RBP18.27■□□□□ 0.52
CPNE1-228ENST00000498814 BMP3P12645 472 aa18.27■□□□□ 0.52
CPNE1-228ENST00000498814 MCCP23508 829 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms