RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 TNFRSF10AO00220 468 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 STRNO43815 780 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 ERCC3P19447 782 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 CYP7A1P22680 504 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 TNNI3KQ59H18 835 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 SPATC1LQ9H0A9 340 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 TACC3Q9Y6A5 838 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 FPGT-TNNI3KV9GXZ4 949 aa19.1■□□□□ 0.65
HDAC6-236ENST00000498808 CT47B1P0C2W7 299 aaPredicted RBP19.09■□□□□ 0.65
HDAC6-236ENST00000498808 SHMT1P34896 483 aa19.09■□□□□ 0.65
HDAC6-236ENST00000498808 CCDC158Q5M9N0 1113 aa19.09■□□□□ 0.65
HDAC6-236ENST00000498808 MIGA1Q8NAN2 632 aa19.09■□□□□ 0.65
HDAC6-236ENST00000498808 SHCBP1Q8NEM2 672 aa19.09■□□□□ 0.65
HDAC6-236ENST00000498808 GPR108Q9NPR9 543 aa19.09■□□□□ 0.65
HDAC6-236ENST00000498808 RAPGEFL1Q9UHV5 662 aa19.09■□□□□ 0.65
HDAC6-236ENST00000498808 PHF24Q9UPV7 400 aa19.09■□□□□ 0.65
HDAC6-236ENST00000498808 KIAA0355O15063 1070 aa19.08■□□□□ 0.64
HDAC6-236ENST00000498808 IGSF3O75054 1194 aa19.08■□□□□ 0.64
HDAC6-236ENST00000498808 CLTBP09497 229 aa19.08■□□□□ 0.64
HDAC6-236ENST00000498808 DNAJB2P25686 324 aa19.08■□□□□ 0.64
HDAC6-236ENST00000498808 USP5P45974 858 aa19.08■□□□□ 0.64
HDAC6-236ENST00000498808 COG2Q14746 738 aa19.08■□□□□ 0.64
HDAC6-236ENST00000498808 ZNF512BQ96KM6 892 aaPredicted RBP19.08■□□□□ 0.64
HDAC6-236ENST00000498808 CABP5Q9NP86 173 aa19.08■□□□□ 0.64
HDAC6-236ENST00000498808 A0A1W2PRG0 241 aa19.07■□□□□ 0.64
HDAC6-236ENST00000498808 SEPT2Q15019 361 aa19.07■□□□□ 0.64
HDAC6-236ENST00000498808 MAML3Q96JK9 1138 aa19.07■□□□□ 0.64
HDAC6-236ENST00000498808 HOXC10Q9NYD6 342 aa19.07■□□□□ 0.64
HDAC6-236ENST00000498808 GNAI2P04899 355 aa19.06■□□□□ 0.64
HDAC6-236ENST00000498808 RAG1P15918 1043 aa19.06■□□□□ 0.64
HDAC6-236ENST00000498808 PLCD1P51178 756 aa19.06■□□□□ 0.64
HDAC6-236ENST00000498808 TTC6Q86TZ1 520 aa19.06■□□□□ 0.64
HDAC6-236ENST00000498808 ARHGAP45Q92619 1136 aa19.06■□□□□ 0.64
HDAC6-236ENST00000498808 XPNPEP3Q9NQH7 507 aa19.06■□□□□ 0.64
HDAC6-236ENST00000498808 ZNFX1Q9P2E3 1918 aaKnown RBP19.06■□□□□ 0.64
HDAC6-236ENST00000498808 HSFX4A0A1B0GTS1 333 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-236ENST00000498808 HSFX3A0A1B0GWH4 333 aaPredicted RBP19.05■□□□□ 0.64
HDAC6-236ENST00000498808 IDH1O75874 414 aaKnown RBP19.05■□□□□ 0.64
HDAC6-236ENST00000498808 RARSP54136 660 aaKnown RBP19.05■□□□□ 0.64
HDAC6-236ENST00000498808 FPGSQ05932 587 aa19.05■□□□□ 0.64
HDAC6-236ENST00000498808 KIAA1755Q5JYT7 1200 aa19.05■□□□□ 0.64
HDAC6-236ENST00000498808 ABRAQ8N0Z2 381 aa19.05■□□□□ 0.64
HDAC6-236ENST00000498808 TANGO6Q9C0B7 1094 aa19.05■□□□□ 0.64
HDAC6-236ENST00000498808 ZNF576Q9H609 170 aa19.05■□□□□ 0.64
HDAC6-236ENST00000498808 SLC5A4Q9NY91 659 aa19.05■□□□□ 0.64
HDAC6-236ENST00000498808 PQBP1O60828 265 aaKnown RBP19.04■□□□□ 0.64
HDAC6-236ENST00000498808 PGK1P00558 417 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 EVX2Q03828 476 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 GABPAQ06546 454 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 NCAPG2Q86XI2 1143 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 CERS3Q8IU89 383 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 MAGEB6Q8N7X4 407 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 MROH8Q9H579 483 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 TLR7Q9NYK1 1049 aaKnown RBP19.04■□□□□ 0.64
HDAC6-236ENST00000498808 DBNLQ9UJU6 430 aaKnown RBP19.04■□□□□ 0.64
HDAC6-236ENST00000498808 TNNQ9UQP3 1299 aa19.04■□□□□ 0.64
HDAC6-236ENST00000498808 MYO9BQ13459 2157 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 PARP14Q460N5 1801 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 A0A1W2PQ45 241 aaPredicted RBP19.03■□□□□ 0.64
HDAC6-236ENST00000498808 A0A1W2PQY0 241 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 RARBP10826 455 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 DSG3P32926 999 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 POLA2Q14181 598 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 PLS1Q14651 629 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 MB21D1Q8N884 522 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 TIFAQ96CG3 184 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 ATG4CQ96DT6 458 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 TMEM39AQ9NV64 488 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 NAV1Q8NEY1 1877 aa19.03■□□□□ 0.64
HDAC6-236ENST00000498808 NCOR1O75376 2440 aa19.02■□□□□ 0.64
HDAC6-236ENST00000498808 FAAP100Q0VG06 881 aa19.02■□□□□ 0.64
HDAC6-236ENST00000498808 RNF180Q86T96 592 aa19.02■□□□□ 0.64
HDAC6-236ENST00000498808 NRBP1Q9UHY1 535 aa19.02■□□□□ 0.64
HDAC6-236ENST00000498808 ROBO3Q96MS0 1386 aa19.02■□□□□ 0.64
HDAC6-236ENST00000498808 FCER1AP12319 257 aa19.01■□□□□ 0.63
HDAC6-236ENST00000498808 TRIM27P14373 513 aa19.01■□□□□ 0.63
HDAC6-236ENST00000498808 TAL1P17542 331 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-236ENST00000498808 ANKRD33Q7Z3H0 272 aa19.01■□□□□ 0.63
HDAC6-236ENST00000498808 ATXN2LQ8WWM7 1075 aaKnown RBP19.01■□□□□ 0.63
HDAC6-236ENST00000498808 PPM1EQ8WY54 764 aa19.01■□□□□ 0.63
HDAC6-236ENST00000498808 LENG1Q96BZ8 264 aaPredicted RBP19.01■□□□□ 0.63
HDAC6-236ENST00000498808 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.01■□□□□ 0.63
HDAC6-236ENST00000498808 RIOK1Q9BRS2 568 aaKnown RBP19.01■□□□□ 0.63
HDAC6-236ENST00000498808 ANTXR1Q9H6X2 564 aa19.01■□□□□ 0.63
HDAC6-236ENST00000498808 PLXNA1Q9UIW2 1896 aa19.01■□□□□ 0.63
HDAC6-236ENST00000498808 COL11A1P12107 1806 aaPredicted RBP19■□□□□ 0.63
HDAC6-236ENST00000498808 MPHOSPH10O00566 681 aaKnown RBP19■□□□□ 0.63
HDAC6-236ENST00000498808 ADAMTS4O75173 837 aa19■□□□□ 0.63
HDAC6-236ENST00000498808 FLOT1O75955 427 aa19■□□□□ 0.63
HDAC6-236ENST00000498808 PBX2P40425 430 aa19■□□□□ 0.63
HDAC6-236ENST00000498808 OS9Q13438 667 aaPredicted RBP19■□□□□ 0.63
HDAC6-236ENST00000498808 TOX2Q96NM4 488 aa19■□□□□ 0.63
HDAC6-236ENST00000498808 CCDC8Q9H0W5 538 aaPredicted RBP19■□□□□ 0.63
HDAC6-236ENST00000498808 POLR3DP05423 398 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-236ENST00000498808 PGK2P07205 417 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 ZNF865P0CJ78 1059 aaPredicted RBP18.99■□□□□ 0.63
HDAC6-236ENST00000498808 TMEM132BQ14DG7 1078 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 CLEC10AQ8IUN9 316 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 SLC44A5Q8NCS7 719 aa18.99■□□□□ 0.63
HDAC6-236ENST00000498808 SSH3Q8TE77 659 aa18.99■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms