RNA–Protein interactions for RNA: ENST00000498259.1

SF3A1-210, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-210ENST00000498259 IGKV6D-41A0A0C4DH26 115 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 PALM3A6NDB9 673 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-210ENST00000498259 KLRF2D3W0D1 207 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 LETM1O95202 739 aaPredicted RBP9.75□□□□□ -0.85
SF3A1-210ENST00000498259 ASNSP08243 561 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 AKR1B1P15121 316 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 GPR162Q16538 588 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 SUPT20HL1Q3ZLR7 823 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 KRT40Q6A162 431 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 NBPF11Q86T75 865 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 RAB11FIP4Q86YS3 637 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 BICD2Q8TD16 824 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 DCAF4Q8WV16 495 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 SPATA32Q96LK8 384 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 GLT8D2Q9H1C3 349 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 GOPCQ9HD26 462 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 GPRC5DQ9NZD1 345 aa9.75□□□□□ -0.85
SF3A1-210ENST00000498259 NOL7Q9UMY1 257 aaKnown RBP9.75□□□□□ -0.85
SF3A1-210ENST00000498259 DCAF8L1A6NGE4 600 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 BMP15O95972 392 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 MMP1P03956 469 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 SCG2P13521 617 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 U2AF2P26368 475 aaKnown RBP eCLIP9.74□□□□□ -0.85
SF3A1-210ENST00000498259 GNA11P29992 359 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 ATP2B2Q01814 1243 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 ICA1Q05084 483 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 DNM1Q05193 864 aaKnown RBP9.74□□□□□ -0.85
SF3A1-210ENST00000498259 RESTQ13127 1097 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 RASA3Q14644 834 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 SF3A1Q15459 793 aaKnown RBP9.74□□□□□ -0.85
SF3A1-210ENST00000498259 PFKFB3Q16875 520 aaPredicted RBP9.74□□□□□ -0.85
SF3A1-210ENST00000498259 RILPL1Q5EBL4 403 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 FERMT3Q86UX7 667 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 TEX2Q8IWB9 1127 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 CCDC82Q8N4S0 544 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 GMCL1P1Q8NEA9 526 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 KCNG4Q8TDN1 519 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 ADARB2Q9NS39 739 aaKnown RBP9.74□□□□□ -0.85
SF3A1-210ENST00000498259 RNF181Q9P0P0 153 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 ISY1Q9ULR0 285 aaKnown RBP9.74□□□□□ -0.85
SF3A1-210ENST00000498259 PITPNM2Q9BZ72 1349 aa9.74□□□□□ -0.85
SF3A1-210ENST00000498259 DDX60LQ5H9U9 1706 aaKnown RBP9.73□□□□□ -0.85
SF3A1-210ENST00000498259 ECM29Q5VYK3 1845 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 IQCA1LA6NCM1 817 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 SMIM22K7EJ46 135 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 FIBPO43427 364 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 YEATS4O95619 227 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 KRT2P35908 639 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 SLC1A4P43007 532 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 NLRP5P59047 1200 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 MAP3K10Q02779 954 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 NBPF9Q3BBW0 867 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 MCTP2Q6DN12 878 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 SH3BP5LQ7L8J4 393 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 USP48Q86UV5 1035 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 NOSTRINQ8IVI9 506 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 ZFPM1Q8IX07 1006 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 SRBD1Q8N5C6 995 aaKnown RBP9.73□□□□□ -0.85
SF3A1-210ENST00000498259 GMCL1Q96IK5 515 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 DEFB129Q9H1M3 183 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 LMBRD1Q9NUN5 540 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 POLR3EQ9NVU0 708 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 MAD2L2Q9UI95 211 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 PNMA2Q9UL42 364 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 PCDHAC2Q9Y5I4 1007 aa9.73□□□□□ -0.85
SF3A1-210ENST00000498259 CTNND1O60716 968 aaKnown RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 PLEKHA8P1O95397 391 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 GH2P01242 217 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 SNHG28P0DPA3 235 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 PDHBP11177 359 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 EEF2P13639 858 aaKnown RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 TRAPPC10P48553 1259 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 GUCY1B3Q02153 619 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 KIF23Q02241 960 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 EVX2Q03828 476 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 FUT2Q10981 343 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 CCDC96Q2M329 555 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 FOXD4L6Q3SYB3 417 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 TBC1D10BQ4KMP7 808 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 PPP1R18Q6NYC8 613 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 FOXD4L3Q6VB84 417 aaPredicted RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 DIS3L2Q8IYB7 885 aaKnown RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 NKX2-3Q8TAU0 364 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 ZC3H15Q8WU90 426 aaKnown RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 DCPSQ96C86 337 aaKnown RBP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.72□□□□□ -0.85
SF3A1-210ENST00000498259 ZNF341Q9BYN7 854 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 C6orf50Q9HD87 102 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 RTEL1Q9NZ71 1219 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 HACL1Q9UJ83 578 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 CNPY2Q9Y2B0 182 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 CDK5RAP2Q96SN8 1893 aa9.72□□□□□ -0.85
SF3A1-210ENST00000498259 COL4A5P29400 1685 aa9.71□□□□□ -0.85
SF3A1-210ENST00000498259 NF2P35240 595 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 CAP2P40123 477 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 FOSBP53539 338 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 ZNF543Q08ER8 600 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 SEPT2Q15019 361 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 STK38Q15208 465 aa9.71□□□□□ -0.86
SF3A1-210ENST00000498259 MYSM1Q5VVJ2 828 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms