RNA–Protein interactions for RNA: ENST00000489537.5

SF3A3-208, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 4

Gene SF3A3, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-208ENST00000489537 STK3Q13188 491 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 GNL2Q13823 731 aaKnown RBP7.38□□□□□ -1.23
SF3A3-208ENST00000489537 MORN1Q5T089 497 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 TTLL5Q6EMB2 1281 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 APOA5Q6Q788 366 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 USP48Q86UV5 1035 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 DGKHQ86XP1 1220 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 LCORLQ8N3X6 602 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 NECAB1Q8N987 351 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 FBXO18Q8NFZ0 1043 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 KCNG4Q8TDN1 519 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 IGDCC4Q8TDY8 1250 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 C7orf43Q8WVR3 580 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 SPATA32Q96LK8 384 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 LZTS2Q9BRK4 669 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 CD209Q9NNX6 404 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 ORC3Q9UBD5 711 aaPredicted RBP7.38□□□□□ -1.23
SF3A3-208ENST00000489537 CACNA1SQ13698 1873 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 DOCK2Q92608 1830 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 COL4A5P29400 1685 aa7.38□□□□□ -1.23
SF3A3-208ENST00000489537 FER1L6Q2WGJ9 1857 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 IRS2Q9Y4H2 1338 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 B4E1Z4 1266 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 LARGE1O95461 756 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 YEATS4O95619 227 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 PRR20EP86478 221 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 PRR20CP86479 221 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 PRR20DP86480 221 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 PRR20BP86481 221 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 PRR20AP86496 221 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 CHAF1AQ13111 956 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-208ENST00000489537 PKP1Q13835 747 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 UVSSAQ2YD98 709 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 CAVIN1Q6NZI2 390 aaKnown RBP7.37□□□□□ -1.23
SF3A3-208ENST00000489537 LRSAM1Q6UWE0 723 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 DPP8Q6V1X1 898 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-208ENST00000489537 TTC6Q86TZ1 520 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 TTLL6Q8N841 843 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 MIGA1Q8NAN2 632 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 TBC1D16Q8TBP0 767 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 NLRP7Q8WX94 980 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 ZNF622Q969S3 477 aaKnown RBP eCLIP7.37□□□□□ -1.232e-11■□□□□ 9.9
SF3A3-208ENST00000489537 TCEANC2Q96MN5 208 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 ZSCAN10Q96SZ4 725 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-208ENST00000489537 RNF26Q9BY78 433 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-208ENST00000489537 GRPEL1Q9HAV7 217 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 DCP1AQ9NPI6 582 aaPredicted RBP7.37□□□□□ -1.23
SF3A3-208ENST00000489537 TCP11L1Q9NUJ3 509 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 ZSWIM5Q9P217 1185 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 CEP131Q9UPN4 1083 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 TIAM2Q8IVF5 1701 aa7.37□□□□□ -1.23
SF3A3-208ENST00000489537 SNED1Q8TER0 1413 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 MROH7-TTC4A0A0A0MT08 1334 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 MYO3BQ8WXR4 1341 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 GPR75-ASB3A0A0A6YYF3 556 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 MINDY4BA8MYZ0 360 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 TOMM70O94826 608 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 ANTXR2P58335 489 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 GPSM2P81274 684 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 RTN1Q16799 776 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 ZSCAN23Q3MJ62 389 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 MFSD14BQ5SR56 506 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 IFIT1BQ5T764 474 aaKnown RBP7.36□□□□□ -1.23
SF3A3-208ENST00000489537 CTR9Q6PD62 1173 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 HHIPL2Q6UWX4 724 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 LIAT1Q6ZQX7 453 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 CCDC73Q6ZRK6 1079 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 TBC1D10CQ8IV04 446 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 ZNF444Q8N0Y2 327 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-208ENST00000489537 FANCBQ8NB91 859 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 CTCFLQ8NI51 663 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-208ENST00000489537 ANKS1AQ92625 1134 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 GZF1Q9H116 711 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-208ENST00000489537 LY9Q9HBG7 655 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 EPB41L4AQ9HCS5 686 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-208ENST00000489537 POLR3EQ9NVU0 708 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 RTEL1Q9NZ71 1219 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 HOOK1Q9UJC3 728 aaKnown RBP7.36□□□□□ -1.23
SF3A3-208ENST00000489537 RCOR1Q9UKL0 485 aa7.36□□□□□ -1.23
SF3A3-208ENST00000489537 MORC2Q9Y6X9 1032 aaPredicted RBP7.36□□□□□ -1.23
SF3A3-208ENST00000489537 ROBO3Q96MS0 1386 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 COL4A1P02462 1669 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 A0A1W2PQ27 194 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 A0A1W2PQ64 194 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 A0A1W2PQD8 194 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 TSPY2A6NKD2 308 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 USP17L12C9JPN9 530 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 USP17L21D6R901 530 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 FIBPO43427 364 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 RANBP6O60518 1105 aaKnown RBP7.35□□□□□ -1.23
SF3A3-208ENST00000489537 DGAT1O75907 488 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 HLA-DOAP06340 250 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 CCDC192P0DO97 292 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 CALML3P27482 149 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 SMARCA1P28370 1054 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 CCT2P78371 535 aaKnown RBP7.35□□□□□ -1.23
SF3A3-208ENST00000489537 DNM1Q05193 864 aaKnown RBP7.35□□□□□ -1.23
SF3A3-208ENST00000489537 CCDC173Q0VFZ6 552 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 ST3GAL1Q11201 340 aa7.35□□□□□ -1.23
SF3A3-208ENST00000489537 RESTQ13127 1097 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms