RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.86■■□□□ 1.41
NSMCE4A-211ENST00000489266 GBP2P32456 591 aaPredicted RBP23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 FAM107AO95990 144 aa23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 IGKV5-2P06315 115 aa23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 RFX5P48382 616 aaPredicted RBP23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 EPHB4P54760 987 aa23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 EPHA10Q5JZY3 1008 aa23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 MMGT1Q8N4V1 131 aa23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 KRI1Q8N9T8 703 aaKnown RBP23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 SYNRGQ9UMZ2 1314 aa23.85■■□□□ 1.41
NSMCE4A-211ENST00000489266 SEMA3FQ13275 785 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 SPECC1Q5M775 1068 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 EMBQ6PCB8 327 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 CCDC121Q6ZUS5 278 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 SPATA20Q8TB22 786 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 C4AP0C0L4 1744 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 C4BP0C0L5 1744 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 SRRM3A6NNA2 597 aaPredicted RBP23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 ZNF185O15231 689 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 SSBP05455 408 aaKnown RBP eCLIP23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 PTPN12Q05209 780 aaKnown RBP23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 KCTD16Q68DU8 428 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 KRT40Q6A162 431 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 GRAMD1CQ8IYS0 662 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 CHP1Q99653 195 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 HINFPQ9BQA5 517 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 ALG1Q9BT22 464 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 SEC31BQ9NQW1 1179 aa23.84■■□□□ 1.41
NSMCE4A-211ENST00000489266 PRC1O43663 620 aa23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 SSR1P43307 286 aaKnown RBP23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 SEC24CP53992 1094 aa23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 IFFO1Q0D2I5 559 aa23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 AIDAQ96BJ3 306 aa23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 ZIM3Q96PE6 472 aa23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 NUP88Q99567 741 aaPredicted RBP23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 EID1Q9Y6B2 187 aa23.83■■□□□ 1.41
NSMCE4A-211ENST00000489266 POLR2DO15514 142 aaKnown RBP23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 RPSAP08865 295 aaKnown RBP23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 CDC25AP30304 524 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 CUL4BQ13620 913 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 CDCA2Q69YH5 1023 aaPredicted RBP23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 HDAC7Q8WUI4 952 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 CAVIN3Q969G5 261 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 RSRC1Q96IZ7 334 aaKnown RBP23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 AIFM3Q96NN9 605 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 KIF9Q9HAQ2 790 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 BATF3Q9NR55 127 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 HAUS2Q9NVX0 235 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 PAG1Q9NWQ8 432 aa23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 DMGDHQ9UI17 866 aaKnown RBP23.83■■□□□ 1.4
NSMCE4A-211ENST00000489266 PPP1R12BO60237 982 aaPredicted RBP23.82■■□□□ 1.4
NSMCE4A-211ENST00000489266 MAST3O60307 1309 aa23.82■■□□□ 1.4
NSMCE4A-211ENST00000489266 STX17P56962 302 aa23.82■■□□□ 1.4
NSMCE4A-211ENST00000489266 EZH2Q15910 746 aaKnown RBP23.82■■□□□ 1.4
NSMCE4A-211ENST00000489266 CCDC122Q5T0U0 273 aa23.82■■□□□ 1.4
NSMCE4A-211ENST00000489266 TTLL7Q6ZT98 887 aa23.82■■□□□ 1.4
NSMCE4A-211ENST00000489266 KRT9P35527 623 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 TRIM14Q14142 442 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 RAB11FIP4Q86YS3 637 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 MB21D2Q8IYB1 491 aaPredicted RBP23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 EHBP1Q8NDI1 1231 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 CCDC26Q8TAB7 109 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 HOOK2Q96ED9 719 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 SH3BP1Q9Y3L3 701 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 HEG1Q9ULI3 1381 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 HERVK_113P62684 666 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 KANK3Q6NY19 840 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 LRRC1Q9BTT6 524 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 POLD4Q9HCU8 107 aa23.81■■□□□ 1.4
NSMCE4A-211ENST00000489266 ANO9A1A5B4 782 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 DNM1LO00429 736 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 MDH1P40925 334 aaKnown RBP23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 KLHL10Q6JEL2 608 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 WDR17Q8IZU2 1322 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 KRT14P02533 472 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 CD44P16070 742 aaKnown RBP23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 ZNF662Q6ZS27 426 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 SPDL1Q96EA4 605 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 LTV1Q96GA3 475 aaPredicted RBP23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 OSBPL7Q9BZF2 842 aa23.8■■□□□ 1.4
NSMCE4A-211ENST00000489266 NR1D1P20393 614 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 RWDD2BP57060 319 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 SPRED3Q2MJR0 410 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 ANKRD20A8PQ5CZ79 823 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 STK11IPQ8N1F8 1099 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 RASSF8Q8NHQ8 419 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 DDX60Q8IY21 1712 aaKnown RBP23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 NEURL1BA8MQ27 555 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 RNF113AO15541 343 aaKnown RBP23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 MGRN1O60291 552 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 CCT6AP40227 531 aaKnown RBP23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 APBA1Q02410 837 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 GCKRQ14397 625 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 MICAL1Q8TDZ2 1067 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 CYFIP2Q96F07 1278 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 TFR2Q9UP52 801 aa23.79■■□□□ 1.4
NSMCE4A-211ENST00000489266 WDR19Q8NEZ3 1342 aa23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 ACTN4O43707 911 aaKnown RBP23.78■■□□□ 1.4
NSMCE4A-211ENST00000489266 ITIH3Q06033 890 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms