RNA–Protein interactions for RNA: ENST00000488927.2

HDAC7-224, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 739 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-224ENST00000488927 C8orf34Q49A92 452 aa18.79■□□□□ 0.6
HDAC7-224ENST00000488927 GPAT2Q6NUI2 795 aa18.79■□□□□ 0.6
HDAC7-224ENST00000488927 STOX1Q6ZVD7 989 aa18.79■□□□□ 0.6
HDAC7-224ENST00000488927 FAM43AQ8N2R8 423 aa18.79■□□□□ 0.6
HDAC7-224ENST00000488927 GMCL1P1Q8NEA9 526 aa18.79■□□□□ 0.6
HDAC7-224ENST00000488927 ZSCAN10Q96SZ4 725 aaPredicted RBP18.79■□□□□ 0.6
HDAC7-224ENST00000488927 PARK7Q99497 189 aaKnown RBP18.79■□□□□ 0.6
HDAC7-224ENST00000488927 RNF186Q9NXI6 227 aa18.79■□□□□ 0.6
HDAC7-224ENST00000488927 ERICH2A1L162 156 aa18.78■□□□□ 0.6
HDAC7-224ENST00000488927 NMT2O60551 498 aa18.78■□□□□ 0.6
HDAC7-224ENST00000488927 HMGB1P09429 215 aaKnown RBP18.78■□□□□ 0.6
HDAC7-224ENST00000488927 TOP1P11387 765 aaKnown RBP18.78■□□□□ 0.6
HDAC7-224ENST00000488927 VCAM1P19320 739 aa18.78■□□□□ 0.6
HDAC7-224ENST00000488927 OSBPP22059 807 aa18.78■□□□□ 0.6
HDAC7-224ENST00000488927 HOXA7P31268 230 aaPredicted RBP18.78■□□□□ 0.6
HDAC7-224ENST00000488927 MCM5P33992 734 aa18.78■□□□□ 0.6
HDAC7-224ENST00000488927 ZFYVE28Q9HCC9 887 aa18.78■□□□□ 0.6
HDAC7-224ENST00000488927 TAF6LQ9Y6J9 622 aa18.78■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L15C9J2P7 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L13C9JLJ4 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L11C9JVI0 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L18D6R9N7 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L22D6RA61 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L17D6RBQ6 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L19D6RCP7 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L20D6RJB6 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 WDR46O15213 610 aaKnown RBP18.77■□□□□ 0.6
HDAC7-224ENST00000488927 TRPA1O75762 1119 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 USP17L24Q0WX57 530 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 TAF1CQ15572 869 aaPredicted RBP18.77■□□□□ 0.6
HDAC7-224ENST00000488927 TREML2Q5T2D2 321 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 MB21D2Q8IYB1 491 aaPredicted RBP18.77■□□□□ 0.6
HDAC7-224ENST00000488927 ANKS1AQ92625 1134 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 NEK1Q96PY6 1258 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 LOC285556D6RIA3 1793 aa18.77■□□□□ 0.6
HDAC7-224ENST00000488927 TNKSO95271 1327 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 PTPRFP10586 1907 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 F5H6K3 240 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 PSMA5P28066 241 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 IRX3P78415 501 aaPredicted RBP18.76■□□□□ 0.59
HDAC7-224ENST00000488927 KLRC3Q07444 240 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 RASEFQ8IZ41 740 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 TMEM47Q9BQJ4 181 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 ZKSCAN3Q9BRR0 538 aa18.76■□□□□ 0.59
HDAC7-224ENST00000488927 WDR19Q8NEZ3 1342 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 RAD21O60216 631 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 DGKZQ13574 1117 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 IFIT1BQ5T764 474 aaKnown RBP18.75■□□□□ 0.59
HDAC7-224ENST00000488927 CYB5R4Q7L1T6 521 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 SPICE1Q8N0Z3 855 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 LRRC47Q8N1G4 583 aaKnown RBP18.75■□□□□ 0.59
HDAC7-224ENST00000488927 ENAHQ8N8S7 591 aaPredicted RBP18.75■□□□□ 0.59
HDAC7-224ENST00000488927 GTF3C2Q8WUA4 911 aaPredicted RBP18.75■□□□□ 0.59
HDAC7-224ENST00000488927 TMEM87BQ96K49 555 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 RPAP3Q9H6T3 665 aaPredicted RBP18.75■□□□□ 0.59
HDAC7-224ENST00000488927 KAT14Q9H8E8 782 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 SNX14Q9Y5W7 946 aa18.75■□□□□ 0.59
HDAC7-224ENST00000488927 IFIT3O14879 490 aaKnown RBP18.74■□□□□ 0.59
HDAC7-224ENST00000488927 PRC1O43663 620 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 NDUFB10O96000 172 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 HSPA1AP0DMV8 641 aaKnown RBP18.74■□□□□ 0.59
HDAC7-224ENST00000488927 HSPA1BP0DMV9 641 aaKnown RBP18.74■□□□□ 0.59
HDAC7-224ENST00000488927 ANAPC15P60006 121 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 NOM1Q5C9Z4 860 aaKnown RBP18.74■□□□□ 0.59
HDAC7-224ENST00000488927 SLFN13Q68D06 897 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 RCSD1Q6JBY9 416 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 CATSPERGQ6ZRH7 1159 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 TMTC2Q8N394 836 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 NKX2-3Q8TAU0 364 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 SMCR8Q8TEV9 937 aaPredicted RBP18.74■□□□□ 0.59
HDAC7-224ENST00000488927 GMCL1Q96IK5 515 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 TANGO6Q9C0B7 1094 aa18.74■□□□□ 0.59
HDAC7-224ENST00000488927 TLR2O60603 784 aa18.73■□□□□ 0.59
HDAC7-224ENST00000488927 CRHR2Q13324 411 aa18.73■□□□□ 0.59
HDAC7-224ENST00000488927 WTAPQ15007 396 aa18.73■□□□□ 0.59
HDAC7-224ENST00000488927 SEC23AQ15436 765 aa18.73■□□□□ 0.59
HDAC7-224ENST00000488927 TMEM67Q5HYA8 995 aa18.73■□□□□ 0.59
HDAC7-224ENST00000488927 DHX32Q7L7V1 743 aaKnown RBP18.73■□□□□ 0.59
HDAC7-224ENST00000488927 DCAF4Q8WV16 495 aa18.73■□□□□ 0.59
HDAC7-224ENST00000488927 ASCC2Q9H1I8 757 aaPredicted RBP18.73■□□□□ 0.59
HDAC7-224ENST00000488927 UPF2Q9HAU5 1272 aaKnown RBP18.73■□□□□ 0.59
HDAC7-224ENST00000488927 PCNTO95613 3336 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 TBC1D8O95759 1140 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 CYP2C8P10632 490 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 SLC1A4P43007 532 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 GCLCP48506 637 aaPredicted RBP18.72■□□□□ 0.59
HDAC7-224ENST00000488927 CTCFP49711 727 aaPredicted RBP18.72■□□□□ 0.59
HDAC7-224ENST00000488927 ANTXR2P58335 489 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 COG2Q14746 738 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 ADCK5Q3MIX3 580 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 KIAA1755Q5JYT7 1200 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 PNMA1Q8ND90 353 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 JAKMIP1Q96N16 626 aaKnown RBP18.72■□□□□ 0.59
HDAC7-224ENST00000488927 HOXC10Q9NYD6 342 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 MYPNQ86TC9 1320 aa18.72■□□□□ 0.59
HDAC7-224ENST00000488927 SEC24BO95487 1268 aa18.71■□□□□ 0.59
HDAC7-224ENST00000488927 BMP3P12645 472 aa18.71■□□□□ 0.59
HDAC7-224ENST00000488927 FAM83BQ5T0W9 1011 aa18.71■□□□□ 0.59
HDAC7-224ENST00000488927 BLOC1S2Q6QNY1 142 aa18.71■□□□□ 0.59
HDAC7-224ENST00000488927 CHST3Q7LGC8 479 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms