RNA–Protein interactions for RNA: ENST00000488214.1

PDAP1-203, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 274 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-203ENST00000488214 SOCS7O14512 581 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 RAD21O60216 631 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 GRIN3BO60391 1043 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 DEXIO95424 95 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 BAG4O95429 457 aaKnown RBP8.03□□□□□ -1.12
PDAP1-203ENST00000488214 GH2P01242 217 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 GOLGA8HP0CJ92 632 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 NCLP19338 710 aaKnown RBP8.03□□□□□ -1.12
PDAP1-203ENST00000488214 MCM4P33991 863 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 AKAP17AQ02040 695 aaKnown RBP8.03□□□□□ -1.12
PDAP1-203ENST00000488214 TRIM29Q14134 588 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 SEPT2Q15019 361 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 PPP2R5BQ15173 497 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 CCDC96Q2M329 555 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 MCTP1Q6DN14 999 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 TATDN1Q6P1N9 297 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 TMEM179Q6ZVK1 233 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 MIGA2Q7L4E1 593 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 WASF1Q92558 559 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 AIFM3Q96NN9 605 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 CABP5Q9NP86 173 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 ZBTB21Q9ULJ3 1066 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 ATP6V1DQ9Y5K8 247 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 PTPRFP10586 1907 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 PARP14Q460N5 1801 aa8.03□□□□□ -1.12
PDAP1-203ENST00000488214 FRMPD2Q68DX3 1309 aaPredicted RBP8.03□□□□□ -1.12
PDAP1-203ENST00000488214 ZC3H4Q9UPT8 1303 aaKnown RBP8.03□□□□□ -1.12
PDAP1-203ENST00000488214 UTRNP46939 3433 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 hCG_1642624A0A1W2PR95 340 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 PARP1P09874 1014 aaKnown RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 PDIA4P13667 645 aaKnown RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 RESTQ13127 1097 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 GNL2Q13823 731 aaKnown RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 RRP1BQ14684 758 aaKnown RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 OTUD7BQ6GQQ9 843 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 NBPF11Q86T75 865 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 METTL16Q86W50 562 aaKnown RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 STAG2Q8N3U4 1231 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 PIBF1Q8WXW3 757 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 RNF26Q9BY78 433 aaPredicted RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 ADARB2Q9NS39 739 aaKnown RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.02□□□□□ -1.13
PDAP1-203ENST00000488214 CLIP2Q9UDT6 1046 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 MAD2L2Q9UI95 211 aa8.02□□□□□ -1.13
PDAP1-203ENST00000488214 USP17L5A8MUK1 530 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 FIBPO43427 364 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 PDHBP11177 359 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 EEF2P13639 858 aaKnown RBP8.01□□□□□ -1.13
PDAP1-203ENST00000488214 GUCY1A2P33402 732 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 NOVP48745 357 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 GNAQP50148 359 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 FUT2Q10981 343 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 DCAF15Q66K64 600 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 KRT40Q6A162 431 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 DPY19L2Q6NUT2 758 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 USP17L2Q6R6M4 530 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 SRBD1Q8N5C6 995 aaKnown RBP8.01□□□□□ -1.13
PDAP1-203ENST00000488214 TEPSINQ96N21 525 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 MAP3K14Q99558 947 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 DEFB129Q9H1M3 183 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 CPVLQ9H3G5 476 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 KANSL2Q9H9L4 492 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 ARHGEF10LQ9HCE6 1279 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 GJB4Q9NTQ9 266 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 PGAP2Q9UHJ9 254 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 CNPY2Q9Y2B0 182 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 PITPNM2Q9BZ72 1349 aa8.01□□□□□ -1.13
PDAP1-203ENST00000488214 LOC285556D6RIA3 1793 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 KIF28PB7ZC32 967 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 ADM5C9JUS6 153 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 PRPF3O43395 683 aaKnown RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 TBC1D12O60347 775 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 XBP1P17861 261 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 PTMSP20962 102 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 HIRAP54198 1017 aaPredicted RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 KRT85P78386 507 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 JAG1P78504 1218 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 DNM1Q05193 864 aaKnown RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 ZNF543Q08ER8 600 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 ASPRV1Q53RT3 343 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 NBPF12Q5TAG4 269 aaPredicted RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 FAM173BQ6P4H8 233 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 CLEC17AQ6ZS10 378 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 CCDC84Q86UT8 332 aaPredicted RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 HOMER1Q86YM7 354 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 FBXO18Q8NFZ0 1043 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 L3MBTL3Q96JM7 780 aaPredicted RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 FEZ1Q99689 392 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 LZTS2Q9BRK4 669 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 GDPD2Q9HCC8 539 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 GPCPD1Q9NPB8 672 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 VPS54Q9P1Q0 977 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 NYAP2Q9P242 653 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 RBM27Q9P2N5 1060 aaKnown RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 SEC63Q9UGP8 760 aaKnown RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 PPP2R3BQ9Y5P8 575 aa8□□□□□ -1.13
PDAP1-203ENST00000488214 COL11A1P12107 1806 aaPredicted RBP8□□□□□ -1.13
PDAP1-203ENST00000488214 PALM3A6NDB9 673 aaPredicted RBP7.99□□□□□ -1.13
PDAP1-203ENST00000488214 GLTPD2A6NH11 291 aa7.99□□□□□ -1.13
PDAP1-203ENST00000488214 KLRF2D3W0D1 207 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms