RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 LTBP2Q14767 1821 aa13.5□□□□□ -0.25
RAB11FIP3-210ENST00000487899 LCTP09848 1927 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 M0R2C6 588 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 FARP2O94887 1054 aaPredicted RBP13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SGPL1O95470 568 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CDK8P49336 464 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 ICA1Q05084 483 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GPR142Q7Z601 462 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 DEFB118Q96PH6 123 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CRISPLD2Q9H0B8 497 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 RABGAP1Q9Y3P9 1069 aa13.49□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GSG1L2A8MUP6 293 aa13.48□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GPAA1O43292 621 aa13.48□□□□□ -0.25
RAB11FIP3-210ENST00000487899 XRCC5P13010 732 aaKnown RBP13.48□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CYP2B6P20813 491 aa13.48□□□□□ -0.25
RAB11FIP3-210ENST00000487899 APBA2Q99767 749 aa13.48□□□□□ -0.25
RAB11FIP3-210ENST00000487899 NUDT12Q9BQG2 462 aa13.48□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.48□□□□□ -0.25
RAB11FIP3-210ENST00000487899 PLIN4Q96Q06 1357 aa13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 RNF113AO15541 343 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 ZFYP08048 801 aaPredicted RBP13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 PRKAR2AP13861 404 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 MX1P20591 662 aa13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CCL14Q16627 93 aa13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 DIS3LQ8TF46 1054 aaKnown RBP13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 LPAR1Q92633 364 aa13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 TANGO6Q9C0B7 1094 aa13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 VCPKMTQ9H867 229 aa13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
RAB11FIP3-210ENST00000487899 RPTORQ8N122 1335 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 H0YGN5 161 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 FOXP2O15409 715 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 ZKSCAN1P17029 563 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 RASA1P20936 1047 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 MNX1P50219 401 aaPredicted RBP13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GRB14Q14449 540 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SBK1Q52WX2 424 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 GIMAP6Q6P9H5 292 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 PLEKHH3Q7Z736 793 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 AMOTL1Q8IY63 956 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SPICE1Q8N0Z3 855 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 DDRGK1Q96HY6 314 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 CCDC17Q96LX7 622 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 YTHDC1Q96MU7 727 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 SEC62Q99442 399 aaKnown RBP13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 ARHGEF10LQ9HCE6 1279 aa13.46□□□□□ -0.25
RAB11FIP3-210ENST00000487899 WDR46O15213 610 aaKnown RBP13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 GLRX3O76003 335 aaKnown RBP13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 IGHA2P01877 340 aa13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 EEF2P13639 858 aaKnown RBP13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 RGS2P41220 211 aa13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 FXR1P51114 621 aaKnown RBP eCLIP13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CCNA1P78396 465 aa13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 MAP2K5Q13163 448 aa13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 HMX1Q9NP08 348 aaPredicted RBP13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 FLRT1Q9NZU1 646 aa13.45□□□□□ -0.26
RAB11FIP3-210ENST00000487899 SMCHD1A6NHR9 2005 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ERC2O15083 957 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 HOXC6P09630 235 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PTPREP23469 700 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CACNB2Q08289 660 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 HDAC1Q13547 482 aaPredicted RBP13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ATG4CQ96DT6 458 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 FSD1Q9BTV5 496 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 MOV10L1Q9BXT6 1211 aaKnown RBP13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 SPATC1LQ9H0A9 340 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
RAB11FIP3-210ENST00000487899 IGKV6D-41A0A0C4DH26 115 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 SLC15A5A6NIM6 579 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 FLOT1O75955 427 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CCND3P30281 292 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 COG2Q14746 738 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ZMYM1Q5SVZ6 1142 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 TRMT44Q8IYL2 757 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ANKLE1Q8NAG6 615 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PAWRQ96IZ0 340 aaKnown RBP13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 HTATIP2Q9BUP3 242 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 KANSL2Q9H9L4 492 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 FBXO28Q9NVF7 368 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 OGDHLQ9ULD0 1010 aa13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 COLQQ9Y215 455 aaPredicted RBP13.43□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PFASO15067 1338 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 TFRCP02786 760 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CAPN2P17655 700 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 GNAT2P19087 354 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 DSG3P32926 999 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 TDO2P48775 406 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 WDR78Q5VTH9 848 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 CCAR1Q8IX12 1150 aaKnown RBP13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 STK11IPQ8N1F8 1099 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 MB21D1Q8N884 522 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 SHCBP1Q8NEM2 672 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 NPLOC4Q8TAT6 608 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PRO3102Q9H379 93 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 STAP2Q9UGK3 403 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ADAMTS5Q9UNA0 930 aa13.42□□□□□ -0.26
RAB11FIP3-210ENST00000487899 MINDY4BA8MYZ0 360 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 PRDM1O75626 825 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ERCC3P19447 782 aa13.41□□□□□ -0.26
RAB11FIP3-210ENST00000487899 ADORA2AP29274 412 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms