RNA–Protein interactions for RNA: ENST00000484733.6

SCFD1-206, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-206ENST00000484733 SIAH1Q8IUQ4 282 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 AMOTL1Q8IY63 956 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 SHCBP1Q8NEM2 672 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 SH2D4AQ9H788 454 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 TMX2Q9Y320 296 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 ZNF236Q9UL36 1845 aa13.81□□□□□ -0.2
SCFD1-206ENST00000484733 C16orf86Q6ZW13 317 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 MB21D1Q8N884 522 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 DYNLL2Q96FJ2 89 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 DCTPP1Q9H773 170 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 ARHGEF10LQ9HCE6 1279 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 BAZ2AQ9UIF9 1905 aaKnown RBP13.8□□□□□ -0.2
SCFD1-206ENST00000484733 CDK8P49336 464 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 SLFNL1Q499Z3 407 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 MFSD14CQ5VZR4 134 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 SLC44A5Q8NCS7 719 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 ECHDC1Q9NTX5 307 aa13.8□□□□□ -0.2
SCFD1-206ENST00000484733 USP17L12C9JPN9 530 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 USP17L21D6R901 530 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 STRNO43815 780 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 COL6A1P12109 1028 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 AKR1B1P15121 316 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 DSG3P32926 999 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 BMP8BP34820 402 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 DDRGK1Q96HY6 314 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 VCPKMTQ9H867 229 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 SMARCA5O60264 1052 aaPredicted RBP13.79□□□□□ -0.2
SCFD1-206ENST00000484733 CCND3P30281 292 aaPredicted RBP13.79□□□□□ -0.2
SCFD1-206ENST00000484733 KIAA1755Q5JYT7 1200 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 SLC4A4Q9Y6R1 1079 aa13.79□□□□□ -0.2
SCFD1-206ENST00000484733 ICA1Q05084 483 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 SBK1Q52WX2 424 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 GIMAP6Q6P9H5 292 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 CTR9Q6PD62 1173 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 MOV10L1Q9BXT6 1211 aaKnown RBP13.78□□□□□ -0.2
SCFD1-206ENST00000484733 SPATC1LQ9H0A9 340 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 PUS7LQ9H0K6 701 aaKnown RBP13.78□□□□□ -0.2
SCFD1-206ENST00000484733 FLRT1Q9NZU1 646 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 FRMPD3Q5JV73 1810 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 WDR46O15213 610 aaKnown RBP13.78□□□□□ -0.2
SCFD1-206ENST00000484733 ATP2B2Q01814 1243 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 OLFML2BQ68BL8 750 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 ABRAQ8N0Z2 381 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 NPLOC4Q8TAT6 608 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 STRBPQ96SI9 672 aaKnown RBP13.78□□□□□ -0.2
SCFD1-206ENST00000484733 TANGO6Q9C0B7 1094 aa13.78□□□□□ -0.2
SCFD1-206ENST00000484733 ARPP21Q9UBL0 812 aaPredicted RBP13.78□□□□□ -0.2
SCFD1-206ENST00000484733 PARP14Q460N5 1801 aa13.77□□□□□ -0.2
SCFD1-206ENST00000484733 PFASO15067 1338 aa13.77□□□□□ -0.2
SCFD1-206ENST00000484733 MSCO60682 206 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 CHGBP05060 677 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 C7orf61Q8IZ16 206 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 KBTBD3Q8NAB2 608 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 GPATCH3Q96I76 525 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 GDF15Q99988 308 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 BCL11AQ9H165 835 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 MROH8Q9H579 483 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 KANSL2Q9H9L4 492 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 ADAMTS5Q9UNA0 930 aa13.77□□□□□ -0.21
SCFD1-206ENST00000484733 GREB1LQ9C091 1923 aaPredicted RBP13.77□□□□□ -0.21
SCFD1-206ENST00000484733 CYP2D7A0A087X1C5 515 aa13.76□□□□□ -0.21
SCFD1-206ENST00000484733 WDR78Q5VTH9 848 aa13.76□□□□□ -0.21
SCFD1-206ENST00000484733 STAP2Q9UGK3 403 aa13.76□□□□□ -0.21
SCFD1-206ENST00000484733 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
SCFD1-206ENST00000484733 SMIM22K7EJ46 135 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 ZFYP08048 801 aaPredicted RBP13.75□□□□□ -0.21
SCFD1-206ENST00000484733 ERCC3P19447 782 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 APPBP2Q92624 585 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 SLC5A4Q9NY91 659 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 ROBO3Q96MS0 1386 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 GSG1L2A8MUP6 293 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 RNF113AO15541 343 aaKnown RBP13.75□□□□□ -0.21
SCFD1-206ENST00000484733 FLOT1O75955 427 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 SLC25A27O95847 323 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 EEF2P13639 858 aaKnown RBP13.75□□□□□ -0.21
SCFD1-206ENST00000484733 ADORA2AP29274 412 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 DPP9Q86TI2 863 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 ATG4CQ96DT6 458 aa13.75□□□□□ -0.21
SCFD1-206ENST00000484733 CYBAP13498 195 aa13.74□□□□□ -0.21
SCFD1-206ENST00000484733 CLEC10AQ8IUN9 316 aa13.74□□□□□ -0.21
SCFD1-206ENST00000484733 GOPCQ9HD26 462 aa13.74□□□□□ -0.21
SCFD1-206ENST00000484733 GNAT2P19087 354 aa13.74□□□□□ -0.21
SCFD1-206ENST00000484733 TRPV1Q8NER1 839 aa13.74□□□□□ -0.21
SCFD1-206ENST00000484733 OSBP2Q969R2 916 aa13.74□□□□□ -0.21
SCFD1-206ENST00000484733 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.74□□□□□ -0.21
SCFD1-206ENST00000484733 CEP290O15078 2479 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 COBLO75128 1261 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 LRRFIP1Q32MZ4 808 aaKnown RBP13.73□□□□□ -0.21
SCFD1-206ENST00000484733 SPICE1Q8N0Z3 855 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 NYAP2Q9P242 653 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 ZMYND8Q9ULU4 1186 aaPredicted RBP13.73□□□□□ -0.21
SCFD1-206ENST00000484733 TTC41PQ6P2S7 1318 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 RASA1P20936 1047 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 CYP2C19P33261 490 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 COPB2P35606 906 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 TMEM132BQ14DG7 1078 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 RIOX2Q8IUF8 465 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 NRBP1Q9UHY1 535 aa13.73□□□□□ -0.21
SCFD1-206ENST00000484733 DNM1LO00429 736 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 59.3 ms