RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 ATG4DQ86TL0 474 aaPredicted RBP3.7□□□□□ -1.82
ITGB1-213ENST00000484088 FLAD1Q8NFF5 587 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 DHX38Q92620 1227 aaKnown RBP3.7□□□□□ -1.82
ITGB1-213ENST00000484088 ARMC5Q96C12 935 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 SPATA32Q96LK8 384 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 DRC1Q96MC2 740 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 ZNF408Q9H9D4 720 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 KCNK12Q9HB15 430 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 RC3H2Q9HBD1 1191 aaKnown RBP3.7□□□□□ -1.82
ITGB1-213ENST00000484088 SSU72Q9NP77 194 aaKnown RBP3.7□□□□□ -1.82
ITGB1-213ENST00000484088 ZNF281Q9Y2X9 895 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 PCDHB14Q9Y5E9 798 aa3.7□□□□□ -1.82
ITGB1-213ENST00000484088 SHISA3A0PJX4 238 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 BTBD11A6QL63 1104 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 KLF4O43474 513 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 HTR3BO95264 441 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 ACRP10323 421 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 ERVFC1P60507 584 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 SERINC3Q13530 473 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 RALGPS1Q5JS13 557 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 CCDC81Q6ZN84 652 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 LSRQ86X29 649 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-213ENST00000484088 MFSD2AQ8NA29 543 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 TANGO6Q9C0B7 1094 aa3.69□□□□□ -1.82
ITGB1-213ENST00000484088 PRDM5Q9NQX1 630 aaPredicted RBP3.69□□□□□ -1.82
ITGB1-213ENST00000484088 DNAJC25-GNG10A0A024R161 153 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 LOC105371045A0A1W2PR82 267 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 NOTOA8MTQ0 251 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 KRTAP9-7A8MTY7 169 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 H3BS24 57 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 PGRP06401 933 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 CLCN7P51798 805 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 ETF1P62495 437 aaKnown RBP3.68□□□□□ -1.82
ITGB1-213ENST00000484088 ZP2Q05996 745 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 SF3A1Q15459 793 aaKnown RBP3.68□□□□□ -1.82
ITGB1-213ENST00000484088 CWF19L2Q2TBE0 894 aaKnown RBP3.68□□□□□ -1.82
ITGB1-213ENST00000484088 SFRP5Q5T4F7 317 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 ZNF648Q5T619 568 aaPredicted RBP3.68□□□□□ -1.82
ITGB1-213ENST00000484088 CDKAL1Q5VV42 579 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 GK5Q6ZS86 529 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 MFSD4AQ8N468 514 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 KCT2Q8NC54 265 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 PI4K2BQ8TCG2 481 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 BUD13Q9BRD0 619 aaKnown RBP eCLIP3.68□□□□□ -1.82
ITGB1-213ENST00000484088 CARS2Q9HA77 564 aaKnown RBP3.68□□□□□ -1.82
ITGB1-213ENST00000484088 REV1Q9UBZ9 1251 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 GTF2IRD1Q9UHL9 959 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 ADAM30Q9UKF2 790 aa3.68□□□□□ -1.82
ITGB1-213ENST00000484088 SLC22A31A6NKX4 558 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 UBOX5O94941 541 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 CBX7O95931 251 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 ZNF165P49910 485 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 IKZF1Q13422 519 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 GNL2Q13823 731 aaKnown RBP3.67□□□□□ -1.82
ITGB1-213ENST00000484088 TIGD5Q53EQ6 642 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 ANGEL2Q5VTE6 544 aaKnown RBP3.67□□□□□ -1.82
ITGB1-213ENST00000484088 SLC6A19Q695T7 634 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 OVOS1Q6IE37 1185 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 RUFY4Q6ZNE9 571 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 CDC37L1Q7L3B6 337 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 TAB3Q8N5C8 712 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-213ENST00000484088 BAHD1Q8TBE0 780 aaPredicted RBP3.67□□□□□ -1.82
ITGB1-213ENST00000484088 TMEM40Q8WWA1 233 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 FAM168AQ92567 244 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 UBXN4Q92575 508 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 SRRTQ9BXP5 876 aaKnown RBP3.67□□□□□ -1.82
ITGB1-213ENST00000484088 CNNM2Q9H8M5 875 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 STRIP2Q9ULQ0 834 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 CEP131Q9UPN4 1083 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 MRVI1Q9Y6F6 885 aa3.67□□□□□ -1.82
ITGB1-213ENST00000484088 BPNT1O95861 308 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 TXKP42681 527 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 CASP7P55210 303 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 ZYXQ15942 572 aaKnown RBP3.66□□□□□ -1.82
ITGB1-213ENST00000484088 ZNF124Q15973 351 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 LCE1DQ5T752 114 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 CDCP2Q5VXM1 449 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 SLFN12Q8IYM2 578 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 DTWD2Q8NBA8 298 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 MICAL1Q8TDZ2 1067 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 ASB11Q8WXH4 323 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 UBE2FQ969M7 185 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 ATG4CQ96DT6 458 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 ASIC4Q96FT7 647 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 LIN37Q96GY3 246 aaPredicted RBP3.66□□□□□ -1.82
ITGB1-213ENST00000484088 DNAJC2Q99543 621 aaKnown RBP3.66□□□□□ -1.82
ITGB1-213ENST00000484088 G6PC3Q9BUM1 346 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 LMCD1Q9NZU5 365 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 GMIPQ9P107 970 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 PRKAG3Q9UGI9 489 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 LTBP3Q9NS15 1303 aa3.66□□□□□ -1.82
ITGB1-213ENST00000484088 A0A1W2PQH9 124 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 TNFRSF10CO14798 259 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 SMAD7O15105 426 aaKnown RBP3.65□□□□□ -1.83
ITGB1-213ENST00000484088 NME1P15531 152 aaKnown RBP3.65□□□□□ -1.83
ITGB1-213ENST00000484088 ATP2B1P20020 1258 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 LMNB1P20700 586 aa3.65□□□□□ -1.83
ITGB1-213ENST00000484088 POLR2BP30876 1174 aaKnown RBP3.65□□□□□ -1.83
ITGB1-213ENST00000484088 GTF2F1P35269 517 aaKnown RBP eCLIP3.65□□□□□ -1.831e-12■■■■■ 49.4
ITGB1-213ENST00000484088 EIF6P56537 245 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms