RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 GAS2L1Q99501 681 aaPredicted RBP13.85□□□□□ -0.19
LSM2-212ENST00000477182 P2RX7Q99572 595 aaKnown RBP13.85□□□□□ -0.19
LSM2-212ENST00000477182 TXNRD2Q9NNW7 524 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 RAI14Q9P0K7 980 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 HCN4Q9Y3Q4 1203 aa13.85□□□□□ -0.19
LSM2-212ENST00000477182 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.84□□□□□ -0.19
LSM2-212ENST00000477182 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.84□□□□□ -0.19
LSM2-212ENST00000477182 KBTBD13C9JR72 458 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 NPM3O75607 178 aaKnown RBP13.84□□□□□ -0.19
LSM2-212ENST00000477182 CHGBP05060 677 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 SLURP2P0DP57 97 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 DNAJB2P25686 324 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 CAP2P40123 477 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 AKNAD1Q5T1N1 836 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 SPTY2D1Q68D10 685 aaPredicted RBP13.84□□□□□ -0.19
LSM2-212ENST00000477182 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.84□□□□□ -0.19
LSM2-212ENST00000477182 ZNF576Q9H609 170 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 DDX4Q9NQI0 724 aaKnown RBP13.84□□□□□ -0.19
LSM2-212ENST00000477182 PDLIM7Q9NR12 457 aa13.84□□□□□ -0.19
LSM2-212ENST00000477182 CDC45O75419 566 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 PDE6AP16499 860 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 BACE1P56817 501 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 SNX17Q15036 470 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 SLFNL1Q499Z3 407 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 DZIP1Q86YF9 867 aaKnown RBP13.83□□□□□ -0.2
LSM2-212ENST00000477182 MAGEB6Q8N7X4 407 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 FAM163AQ96GL9 167 aaPredicted RBP13.83□□□□□ -0.2
LSM2-212ENST00000477182 WDR18Q9BV38 432 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 PORCNQ9H237 461 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 RBPJLQ9UBG7 517 aa13.83□□□□□ -0.2
LSM2-212ENST00000477182 C19orf81C9J6K1 198 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 RNF113AO15541 343 aaKnown RBP13.82□□□□□ -0.2
LSM2-212ENST00000477182 CHMLP26374 656 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 ADD2P35612 726 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 CCNA1P78396 465 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 ATP2B2Q01814 1243 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 MECOMQ03112 1051 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 MTMR2Q13614 643 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 Q3C1V9 767 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 TRIM60Q495X7 471 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 SLC9C2Q5TAH2 1124 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 C1orf53Q5VUE5 145 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 ZSCAN25Q6NSZ9 544 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 ZNF384Q8TF68 577 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 PPM1EQ8WY54 764 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 DIAPH3Q9NSV4 1193 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 TACC3Q9Y6A5 838 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 CDK5RAP2Q96SN8 1893 aa13.82□□□□□ -0.2
LSM2-212ENST00000477182 TRIM43BA6NCK2 446 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 SLC15A5A6NIM6 579 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 HIP1O00291 1037 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 BTDP43251 543 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 NMIQ13287 307 aaPredicted RBP13.81□□□□□ -0.2
LSM2-212ENST00000477182 LRRFIP1Q32MZ4 808 aaKnown RBP13.81□□□□□ -0.2
LSM2-212ENST00000477182 GJC2Q5T442 439 aaPredicted RBP13.81□□□□□ -0.2
LSM2-212ENST00000477182 NAA16Q6N069 864 aaPredicted RBP13.81□□□□□ -0.2
LSM2-212ENST00000477182 TRIM43Q96BQ3 446 aaPredicted RBP13.81□□□□□ -0.2
LSM2-212ENST00000477182 NSUN4Q96CB9 384 aaKnown RBP13.81□□□□□ -0.2
LSM2-212ENST00000477182 TIFAQ96CG3 184 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 FAM227BQ96M60 508 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 PAGR1Q9BTK6 254 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 HERC5Q9UII4 1024 aaKnown RBP13.81□□□□□ -0.2
LSM2-212ENST00000477182 ZNF532Q9HCE3 1301 aa13.81□□□□□ -0.2
LSM2-212ENST00000477182 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 TCRBV5S4A2TA0A5A2 114 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 FAM196BA6NMK8 535 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 PEX10O60683 326 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 ZFYP08048 801 aaPredicted RBP13.8□□□□□ -0.2
LSM2-212ENST00000477182 ASNSP08243 561 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 HOXC6P09630 235 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 CYP7A1P22680 504 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 ZMYM1Q5SVZ6 1142 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 CWC27Q6UX04 472 aaKnown RBP13.8□□□□□ -0.2
LSM2-212ENST00000477182 SH3RF1Q7Z6J0 888 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 TICAM2Q86XR7 235 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 TSPYL2Q9H2G4 693 aaPredicted RBP13.8□□□□□ -0.2
LSM2-212ENST00000477182 FLRT1Q9NZU1 646 aa13.8□□□□□ -0.2
LSM2-212ENST00000477182 MYO9BQ13459 2157 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 USP17L10C9JJH3 530 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 GSTO1P78417 241 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 UBE3CQ15386 1083 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 CASC1Q6TDU7 716 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 ADGRA1Q86SQ6 560 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 APPBP2Q92624 585 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 SEC62Q99442 399 aaKnown RBP13.79□□□□□ -0.2
LSM2-212ENST00000477182 RABGAP1Q9Y3P9 1069 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 IVNS1ABPQ9Y6Y0 642 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 MROH7-TTC4A0A0A0MT08 1334 aa13.79□□□□□ -0.2
LSM2-212ENST00000477182 PIEZO1Q92508 2521 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 GPR75-ASB3A0A0A6YYF3 556 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 IGSF3O75054 1194 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 LDHCP07864 332 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 CLTBP09497 229 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 RAG1P15918 1043 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 PTPREP23469 700 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 FPGSQ05932 587 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 WDR78Q5VTH9 848 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 POTEEQ6S8J3 1075 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 MIGA1Q8NAN2 632 aa13.78□□□□□ -0.2
LSM2-212ENST00000477182 OSBP2Q969R2 916 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms