RNA–Protein interactions for RNA: ENST00000476842.1

SMIM4-202, Transcript of small integral membrane protein 4, humanhuman

TSL 4 BASIC

Gene SMIM4, Length 522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-202ENST00000476842 KIAA1755Q5JYT7 1200 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 ESR2Q92731 530 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 SYNPO2Q9UMS6 1093 aa21.05■□□□□ 0.96
SMIM4-202ENST00000476842 RBM8AQ9Y5S9 174 aaKnown RBP21.05■□□□□ 0.96
SMIM4-202ENST00000476842 CYP21A2P08686 494 aa21.04■□□□□ 0.96
SMIM4-202ENST00000476842 NOVP48745 357 aa21.04■□□□□ 0.96
SMIM4-202ENST00000476842 CATSPERGQ6ZRH7 1159 aa21.04■□□□□ 0.96
SMIM4-202ENST00000476842 P2RX7Q99572 595 aaKnown RBP21.04■□□□□ 0.96
SMIM4-202ENST00000476842 GOPCQ9HD26 462 aa21.04■□□□□ 0.96
SMIM4-202ENST00000476842 ANO2Q9NQ90 1003 aa21.04■□□□□ 0.96
SMIM4-202ENST00000476842 CPA4Q9UI42 421 aa21.04■□□□□ 0.96
SMIM4-202ENST00000476842 BCRP11274 1271 aa21.03■□□□□ 0.96
SMIM4-202ENST00000476842 IRX3P78415 501 aaPredicted RBP21.03■□□□□ 0.96
SMIM4-202ENST00000476842 SMCR8Q8TEV9 937 aaPredicted RBP21.03■□□□□ 0.96
SMIM4-202ENST00000476842 KRT23Q9C075 422 aa21.03■□□□□ 0.96
SMIM4-202ENST00000476842 RPAP3Q9H6T3 665 aaPredicted RBP21.03■□□□□ 0.96
SMIM4-202ENST00000476842 CNNM2Q9H8M5 875 aa21.03■□□□□ 0.96
SMIM4-202ENST00000476842 NEDD4P46934 1319 aa21.03■□□□□ 0.96
SMIM4-202ENST00000476842 NMT2O60551 498 aa21.02■□□□□ 0.96
SMIM4-202ENST00000476842 GCLCP48506 637 aaPredicted RBP21.02■□□□□ 0.96
SMIM4-202ENST00000476842 NKX2-3Q8TAU0 364 aa21.02■□□□□ 0.96
SMIM4-202ENST00000476842 F5H6K3 240 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 WDR46O15213 610 aaKnown RBP21.01■□□□□ 0.95
SMIM4-202ENST00000476842 KLRC3Q07444 240 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 NECTIN1Q15223 517 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 COL13A1Q5TAT6 717 aaPredicted RBP21.01■□□□□ 0.95
SMIM4-202ENST00000476842 SPICE1Q8N0Z3 855 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 ERO1AQ96HE7 468 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 TTC14Q96N46 770 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 ZSWIM5Q9P217 1185 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 STX8Q9UNK0 236 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 PTPRFP10586 1907 aa21.01■□□□□ 0.95
SMIM4-202ENST00000476842 B4E1Z4 1266 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 KDM4AO75164 1064 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 HERVK_113P62684 666 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 COG2Q14746 738 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 CCDC178Q5BJE1 867 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 GMCL1P1Q8NEA9 526 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 GTF3C2Q8WUA4 911 aaPredicted RBP21■□□□□ 0.95
SMIM4-202ENST00000476842 HOXC10Q9NYD6 342 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 LOC285556D6RIA3 1793 aa21■□□□□ 0.95
SMIM4-202ENST00000476842 GREB1LQ9C091 1923 aaPredicted RBP21■□□□□ 0.95
SMIM4-202ENST00000476842 E7EWF7 191 aa20.99■□□□□ 0.95
SMIM4-202ENST00000476842 TRDNQ13061 729 aa20.99■□□□□ 0.95
SMIM4-202ENST00000476842 TAF6LQ9Y6J9 622 aa20.99■□□□□ 0.95
SMIM4-202ENST00000476842 SLC27A2O14975 620 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 RAD21O60216 631 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 NDUFB10O96000 172 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 LACTBP83111 547 aaPredicted RBP20.98■□□□□ 0.95
SMIM4-202ENST00000476842 FAM110CQ1W6H9 321 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 CREB3L3Q68CJ9 461 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 LBX2Q6XYB7 198 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 IQCA1Q86XH1 822 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 DGKHQ86XP1 1220 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 LRRC47Q8N1G4 583 aaKnown RBP20.98■□□□□ 0.95
SMIM4-202ENST00000476842 CD99L2Q8TCZ2 262 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 TANGO6Q9C0B7 1094 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 RBPJLQ9UBG7 517 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 MORF4L1Q9UBU8 362 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 MYH8P13535 1937 aa20.98■□□□□ 0.95
SMIM4-202ENST00000476842 TOP1P11387 765 aaKnown RBP20.97■□□□□ 0.95
SMIM4-202ENST00000476842 KIF22Q14807 665 aa20.97■□□□□ 0.95
SMIM4-202ENST00000476842 ARHGEF6Q15052 776 aa20.97■□□□□ 0.95
SMIM4-202ENST00000476842 SLFN13Q68D06 897 aa20.97■□□□□ 0.95
SMIM4-202ENST00000476842 RCSD1Q6JBY9 416 aa20.97■□□□□ 0.95
SMIM4-202ENST00000476842 CTU1Q7Z7A3 348 aaKnown RBP20.97■□□□□ 0.95
SMIM4-202ENST00000476842 ANKRD13CQ8N6S4 541 aa20.97■□□□□ 0.95
SMIM4-202ENST00000476842 ANKS1AQ92625 1134 aa20.97■□□□□ 0.95
SMIM4-202ENST00000476842 TMEM47Q9BQJ4 181 aa20.97■□□□□ 0.95
SMIM4-202ENST00000476842 DSG3P32926 999 aa20.96■□□□□ 0.95
SMIM4-202ENST00000476842 FAM83BQ5T0W9 1011 aa20.96■□□□□ 0.95
SMIM4-202ENST00000476842 POTEEQ6S8J3 1075 aa20.96■□□□□ 0.95
SMIM4-202ENST00000476842 STOX1Q6ZVD7 989 aa20.96■□□□□ 0.95
SMIM4-202ENST00000476842 NCOA7Q8NI08 942 aa20.96■□□□□ 0.95
SMIM4-202ENST00000476842 ZSCAN10Q96SZ4 725 aaPredicted RBP20.96■□□□□ 0.95
SMIM4-202ENST00000476842 ZKSCAN3Q9BRR0 538 aa20.96■□□□□ 0.95
SMIM4-202ENST00000476842 RABGAP1Q9Y3P9 1069 aa20.96■□□□□ 0.95
SMIM4-202ENST00000476842 SPDYE16A6NNV3 312 aaPredicted RBP20.95■□□□□ 0.94
SMIM4-202ENST00000476842 FLOT1O75955 427 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 REC8O95072 547 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 CAP1Q01518 475 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 RNF20Q5VTR2 975 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 CYB5R4Q7L1T6 521 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 RALYLQ86SE5 291 aaKnown RBP20.95■□□□□ 0.94
SMIM4-202ENST00000476842 GMCL1Q96IK5 515 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 EFCC1Q9HA90 598 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 TXNRD2Q9NNW7 524 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 MYPNQ86TC9 1320 aa20.95■□□□□ 0.94
SMIM4-202ENST00000476842 EPB41L2O43491 1005 aaKnown RBP20.94■□□□□ 0.94
SMIM4-202ENST00000476842 BMP3P12645 472 aa20.94■□□□□ 0.94
SMIM4-202ENST00000476842 TSGA10IPQ3SY00 556 aa20.94■□□□□ 0.94
SMIM4-202ENST00000476842 GPRC5AQ8NFJ5 357 aa20.94■□□□□ 0.94
SMIM4-202ENST00000476842 NUP88Q99567 741 aaPredicted RBP20.94■□□□□ 0.94
SMIM4-202ENST00000476842 CNMDO75829 334 aa20.93■□□□□ 0.94
SMIM4-202ENST00000476842 GNRH1P01148 92 aa20.93■□□□□ 0.94
SMIM4-202ENST00000476842 MCCP23508 829 aa20.93■□□□□ 0.94
SMIM4-202ENST00000476842 CTGFP29279 349 aa20.93■□□□□ 0.94
SMIM4-202ENST00000476842 PSMC4P43686 418 aa20.93■□□□□ 0.94
SMIM4-202ENST00000476842 PKN2Q16513 984 aaKnown RBP20.93■□□□□ 0.94
SMIM4-202ENST00000476842 Q3C1V9 767 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms