RNA–Protein interactions for RNA: ENST00000474828.1

SCAF11-206, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 757 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-206ENST00000474828 KCNB2Q92953 911 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 TTC14Q96N46 770 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 PARK7Q99497 189 aaKnown RBP20.03■□□□□ 0.8
SCAF11-206ENST00000474828 TAF6LQ9Y6J9 622 aa20.03■□□□□ 0.8
SCAF11-206ENST00000474828 TSPY2A6NKD2 308 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 RANBP6O60518 1105 aaKnown RBP20.02■□□□□ 0.8
SCAF11-206ENST00000474828 BCRP11274 1271 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 RCSD1Q6JBY9 416 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 LBX2Q6XYB7 198 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 CATSPERGQ6ZRH7 1159 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 GMCL1P1Q8NEA9 526 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 FEZ1Q99689 392 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 KRT23Q9C075 422 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 ANO2Q9NQ90 1003 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 PNMA3Q9UL41 463 aa20.02■□□□□ 0.8
SCAF11-206ENST00000474828 ASCC2Q9H1I8 757 aaPredicted RBP20.01■□□□□ 0.79
SCAF11-206ENST00000474828 ZSWIM5Q9P217 1185 aa20.01■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L15C9J2P7 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L13C9JLJ4 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L11C9JVI0 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L18D6R9N7 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L22D6RA61 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L17D6RBQ6 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L19D6RCP7 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L20D6RJB6 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 E7EWF7 191 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 SLC27A2O14975 620 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 WDR46O15213 610 aaKnown RBP20■□□□□ 0.79
SCAF11-206ENST00000474828 USP17L24Q0WX57 530 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 CREB3L3Q68CJ9 461 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 POTEEQ6S8J3 1075 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 STOX1Q6ZVD7 989 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 DGKHQ86XP1 1220 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 CLIP2Q9UDT6 1046 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 TSKSQ9UJT2 592 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 MYPNQ86TC9 1320 aa20■□□□□ 0.79
SCAF11-206ENST00000474828 F5H6K3 240 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 NMT2O60551 498 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 CYP2C8P10632 490 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 OSBPP22059 807 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 GCLCP48506 637 aaPredicted RBP19.99■□□□□ 0.79
SCAF11-206ENST00000474828 KLRC3Q07444 240 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 CCDC178Q5BJE1 867 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 GOPCQ9HD26 462 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 MORF4L1Q9UBU8 362 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 RLFQ13129 1914 aa19.99■□□□□ 0.79
SCAF11-206ENST00000474828 B4E1Z4 1266 aa19.98■□□□□ 0.79
SCAF11-206ENST00000474828 KDM4AO75164 1064 aa19.98■□□□□ 0.79
SCAF11-206ENST00000474828 REC8O95072 547 aa19.98■□□□□ 0.79
SCAF11-206ENST00000474828 ZNF296Q8WUU4 475 aaPredicted RBP19.98■□□□□ 0.79
SCAF11-206ENST00000474828 GMCL1Q96IK5 515 aa19.98■□□□□ 0.79
SCAF11-206ENST00000474828 MTA3Q9BTC8 594 aa19.98■□□□□ 0.79
SCAF11-206ENST00000474828 RPAP3Q9H6T3 665 aaPredicted RBP19.98■□□□□ 0.79
SCAF11-206ENST00000474828 ADAMTS5Q9UNA0 930 aa19.98■□□□□ 0.79
SCAF11-206ENST00000474828 NDUFB10O96000 172 aa19.97■□□□□ 0.79
SCAF11-206ENST00000474828 HERVK_113P62684 666 aa19.97■□□□□ 0.79
SCAF11-206ENST00000474828 ZYXQ15942 572 aaKnown RBP19.97■□□□□ 0.79
SCAF11-206ENST00000474828 RRP12Q5JTH9 1297 aaKnown RBP19.97■□□□□ 0.79
SCAF11-206ENST00000474828 MB21D2Q8IYB1 491 aaPredicted RBP19.97■□□□□ 0.79
SCAF11-206ENST00000474828 GTF3C2Q8WUA4 911 aaPredicted RBP19.97■□□□□ 0.79
SCAF11-206ENST00000474828 P2RX7Q99572 595 aaKnown RBP19.97■□□□□ 0.79
SCAF11-206ENST00000474828 PLA2G6O60733 806 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 FKTNO75072 461 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 TOP1P11387 765 aaKnown RBP19.96■□□□□ 0.79
SCAF11-206ENST00000474828 HSPA4P34932 840 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 SP3Q02447 781 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 SEC23AQ15436 765 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 FAM110CQ1W6H9 321 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 RNF20Q5VTR2 975 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 CYB5R4Q7L1T6 521 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 IQCA1Q86XH1 822 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 NCOA7Q8NI08 942 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 ABHD8Q96I13 439 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 ZSCAN10Q96SZ4 725 aaPredicted RBP19.96■□□□□ 0.79
SCAF11-206ENST00000474828 TMEM47Q9BQJ4 181 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 TOMM22Q9NS69 142 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 A0A0G2JMZ2 1700 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 MYH4Q9Y623 1939 aa19.96■□□□□ 0.79
SCAF11-206ENST00000474828 SNHG28P0DPA3 235 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 IRX3P78415 501 aaPredicted RBP19.95■□□□□ 0.78
SCAF11-206ENST00000474828 TRDNQ13061 729 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 COG2Q14746 738 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 ENAHQ8N8S7 591 aaPredicted RBP19.95■□□□□ 0.78
SCAF11-206ENST00000474828 USP26Q9BXU7 913 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 RBPJLQ9UBG7 517 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 STX8Q9UNK0 236 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 GTF3C3Q9Y5Q9 886 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 PARP14Q460N5 1801 aa19.95■□□□□ 0.78
SCAF11-206ENST00000474828 SPDYE16A6NNV3 312 aaPredicted RBP19.94■□□□□ 0.78
SCAF11-206ENST00000474828 ATP2B2Q01814 1243 aa19.94■□□□□ 0.78
SCAF11-206ENST00000474828 RASEFQ8IZ41 740 aa19.94■□□□□ 0.78
SCAF11-206ENST00000474828 SPICE1Q8N0Z3 855 aa19.94■□□□□ 0.78
SCAF11-206ENST00000474828 LRRC47Q8N1G4 583 aaKnown RBP19.94■□□□□ 0.78
SCAF11-206ENST00000474828 HOXC10Q9NYD6 342 aa19.94■□□□□ 0.78
SCAF11-206ENST00000474828 CPA4Q9UI42 421 aa19.94■□□□□ 0.78
SCAF11-206ENST00000474828 DSG3P32926 999 aa19.93■□□□□ 0.78
SCAF11-206ENST00000474828 ANTXR2P58335 489 aa19.93■□□□□ 0.78
SCAF11-206ENST00000474828 LACTBP83111 547 aaPredicted RBP19.93■□□□□ 0.78
SCAF11-206ENST00000474828 CAP1Q01518 475 aa19.93■□□□□ 0.78
SCAF11-206ENST00000474828 SLFN13Q68D06 897 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms