RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 ADORA1P30542 326 aa15.51■□□□□ 0.07
NPHP4-207ENST00000470763 KRT9P35527 623 aa15.51■□□□□ 0.07
NPHP4-207ENST00000470763 CUL4BQ13620 913 aa15.51■□□□□ 0.07
NPHP4-207ENST00000470763 SCARF1Q14162 830 aa15.51■□□□□ 0.07
NPHP4-207ENST00000470763 CDKAL1Q5VV42 579 aa15.51■□□□□ 0.07
NPHP4-207ENST00000470763 MYO1AQ9UBC5 1043 aa15.51■□□□□ 0.07
NPHP4-207ENST00000470763 CTNND2Q9UQB3 1225 aa15.51■□□□□ 0.07
NPHP4-207ENST00000470763 A0A087X0B3 334 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 ZNF185O15231 689 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 MRPS25P82663 173 aaKnown RBP15.5■□□□□ 0.07
NPHP4-207ENST00000470763 NTRK3Q16288 839 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 CAGE1Q8TC20 777 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 POLD4Q9HCU8 107 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 SAR1BQ9Y6B6 198 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 SH2B2O14492 632 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-207ENST00000470763 MYCNP04198 464 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-207ENST00000470763 CCDC172P0C7W6 258 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 FOXO4P98177 505 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 DPYDQ12882 1025 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 ZNF496Q96IT1 587 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-207ENST00000470763 CTAGE1Q96RT6 745 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 STRN4Q9NRL3 753 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 TAB2Q9NYJ8 693 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 CAPN7Q9Y6W3 813 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 C5P01031 1676 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 OVOS2A0A0G2JMS6 1433 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 SHTN1A0MZ66 631 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 KRT31Q15323 416 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 ELOA2Q8IYF1 753 aaPredicted RBP15.5■□□□□ 0.07
NPHP4-207ENST00000470763 CMTR1Q8N1G2 835 aaKnown RBP15.5■□□□□ 0.07
NPHP4-207ENST00000470763 CCDC51Q96ER9 411 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 EPSTI1Q96J88 318 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 GRIN2DO15399 1336 aa15.5■□□□□ 0.07
NPHP4-207ENST00000470763 MYO1FO00160 1098 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 CASP7P55210 303 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 RRP36Q96EU6 259 aaKnown RBP15.49■□□□□ 0.07
NPHP4-207ENST00000470763 FAM217BQ9NTX9 383 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-207ENST00000470763 SPATA31A1Q5TZJ5 1347 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 NDUFA10O95299 355 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 ATP6V1AP38606 617 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 IL15P40933 162 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-207ENST00000470763 C2orf54Q08AI8 447 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 FKBP15Q5T1M5 1219 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 SPATA20Q8TB22 786 aa15.49■□□□□ 0.07
NPHP4-207ENST00000470763 JPH2Q9BR39 696 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-207ENST00000470763 EPN1Q9Y6I3 576 aaPredicted RBP15.49■□□□□ 0.07
NPHP4-207ENST00000470763 MCM3P25205 808 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 ZAP70P43403 619 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 PPFIA1Q13136 1202 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 CCDC122Q5T0U0 273 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 CEP83Q9Y592 693 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 H0YHG0 523 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 EIF3HO15372 352 aaKnown RBP eCLIP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 FECHP22830 423 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 SSRP1Q08945 709 aaKnown RBP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 SAFBQ15424 915 aaKnown RBP eCLIP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 CCNI2Q6ZMN8 369 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 SND1Q7KZF4 910 aaKnown RBP eCLIP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 JAKMIP2Q96AA8 810 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 GNL3LQ9NVN8 582 aaKnown RBP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 THSD7AQ9UPZ6 1657 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 PDE2AO00408 941 aaPredicted RBP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 KANK3Q6NY19 840 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 OXER1Q8TDS5 423 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 APPBP2Q92624 585 aa15.48■□□□□ 0.07
NPHP4-207ENST00000470763 DDX60Q8IY21 1712 aaKnown RBP15.48■□□□□ 0.07
NPHP4-207ENST00000470763 PPP1R3GB7ZBB8 358 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 MMP1P03956 469 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 NBPF14Q5TI25 921 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 KRT27Q7Z3Y8 459 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 LRP10Q7Z4F1 713 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 EYA2O00167 538 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 PSMD14O00487 310 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 EZH2Q15910 746 aaKnown RBP15.47■□□□□ 0.07
NPHP4-207ENST00000470763 BANK1Q8NDB2 785 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 CCDC85AQ96PX6 553 aaPredicted RBP15.47■□□□□ 0.07
NPHP4-207ENST00000470763 SUFUQ9UMX1 484 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 COL18A1P39060 1754 aa15.47■□□□□ 0.07
NPHP4-207ENST00000470763 FAM205CA6NFA0 338 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 PES1O00541 588 aaKnown RBP15.46■□□□□ 0.07
NPHP4-207ENST00000470763 USP8P40818 1118 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 PDCLQ13371 301 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 TMEM67Q5HYA8 995 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 POTEDQ86YR6 584 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 ANKRD18AQ8IVF6 992 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 PAGE5Q96GU1 130 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 CABP5Q9NP86 173 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 SRPRBQ9Y5M8 271 aaKnown RBP15.46■□□□□ 0.07
NPHP4-207ENST00000470763 ITIH6Q6UXX5 1313 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 COL5A2P05997 1499 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-207ENST00000470763 MYO5AQ9Y4I1 1855 aaKnown RBP15.46■□□□□ 0.07
NPHP4-207ENST00000470763 MAP3K15Q6ZN16 1313 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 IBSPP21815 317 aaPredicted RBP15.46■□□□□ 0.07
NPHP4-207ENST00000470763 HDAC7Q8WUI4 952 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 AIDAQ96BJ3 306 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 BLZF1Q9H2G9 400 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 GPR108Q9NPR9 543 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 MAPK8IP1Q9UQF2 711 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 AXIN2Q9Y2T1 843 aa15.46■□□□□ 0.07
NPHP4-207ENST00000470763 TARSL2A2RTX5 802 aaKnown RBP15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms