RNA–Protein interactions for RNA: ENST00000469897.1

CPSF4-210, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 689 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-210ENST00000469897 MAST2Q6P0Q8 1798 aa16■□□□□ 0.15
CPSF4-210ENST00000469897 ATP2B2Q01814 1243 aa15.99■□□□□ 0.15
CPSF4-210ENST00000469897 CTR9Q6PD62 1173 aa15.99■□□□□ 0.15
CPSF4-210ENST00000469897 SPICE1Q8N0Z3 855 aa15.99■□□□□ 0.15
CPSF4-210ENST00000469897 ECHDC1Q9NTX5 307 aa15.99■□□□□ 0.15
CPSF4-210ENST00000469897 TMX2Q9Y320 296 aa15.99■□□□□ 0.15
CPSF4-210ENST00000469897 IVNS1ABPQ9Y6Y0 642 aa15.99■□□□□ 0.15
CPSF4-210ENST00000469897 PTPRFP10586 1907 aa15.99■□□□□ 0.15
CPSF4-210ENST00000469897 DSG3P32926 999 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 MFSD14CQ5VZR4 134 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 AMOTL1Q8IY63 956 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 NPLOC4Q8TAT6 608 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 DDRGK1Q96HY6 314 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 CCDC17Q96LX7 622 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 MOV10L1Q9BXT6 1211 aaKnown RBP15.98■□□□□ 0.15
CPSF4-210ENST00000469897 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 ARHGEF10LQ9HCE6 1279 aa15.98■□□□□ 0.15
CPSF4-210ENST00000469897 ZMYND8Q9ULU4 1186 aaPredicted RBP15.98■□□□□ 0.15
CPSF4-210ENST00000469897 SYN1P17600 705 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 CNGA1P29973 690 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 CYP2C19P33261 490 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 ICA1Q05084 483 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 GRB14Q14449 540 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 PLS1Q14651 629 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 TSHZ3Q63HK5 1081 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 SAMD1Q6SPF0 538 aaPredicted RBP15.97■□□□□ 0.15
CPSF4-210ENST00000469897 C16orf86Q6ZW13 317 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 DPP9Q86TI2 863 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 STK11IPQ8N1F8 1099 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 STRBPQ96SI9 672 aaKnown RBP15.97■□□□□ 0.15
CPSF4-210ENST00000469897 SPATC1LQ9H0A9 340 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 MGAMO43451 1857 aa15.97■□□□□ 0.15
CPSF4-210ENST00000469897 FLOT1O75955 427 aa15.96■□□□□ 0.15
CPSF4-210ENST00000469897 HOXC6P09630 235 aa15.96■□□□□ 0.15
CPSF4-210ENST00000469897 EEF2P13639 858 aaKnown RBP15.96■□□□□ 0.15
CPSF4-210ENST00000469897 ERCC3P19447 782 aa15.96■□□□□ 0.15
CPSF4-210ENST00000469897 LPAR1Q92633 364 aa15.96■□□□□ 0.15
CPSF4-210ENST00000469897 ATG4CQ96DT6 458 aa15.96■□□□□ 0.15
CPSF4-210ENST00000469897 VCPKMTQ9H867 229 aa15.96■□□□□ 0.15
CPSF4-210ENST00000469897 MYO5AQ9Y4I1 1855 aaKnown RBP15.96■□□□□ 0.15
CPSF4-210ENST00000469897 PFASO15067 1338 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 STRNO43815 780 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 COL6A1P12109 1028 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 ADORA2AP29274 412 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 OSBP2Q969R2 916 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 KANSL2Q9H9L4 492 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 ATAD5Q96QE3 1844 aa15.95■□□□□ 0.14
CPSF4-210ENST00000469897 GSG1L2A8MUP6 293 aa15.94■□□□□ 0.14
CPSF4-210ENST00000469897 RAD21O60216 631 aa15.94■□□□□ 0.14
CPSF4-210ENST00000469897 COBLO75128 1261 aa15.94■□□□□ 0.14
CPSF4-210ENST00000469897 NCAPG2Q86XI2 1143 aa15.94■□□□□ 0.14
CPSF4-210ENST00000469897 KBTBD3Q8NAB2 608 aa15.94■□□□□ 0.14
CPSF4-210ENST00000469897 TRPV1Q8NER1 839 aa15.94■□□□□ 0.14
CPSF4-210ENST00000469897 GDF15Q99988 308 aa15.94■□□□□ 0.14
CPSF4-210ENST00000469897 DDX20Q9UHI6 824 aaKnown RBP15.94■□□□□ 0.14
CPSF4-210ENST00000469897 MINDY4BA8MYZ0 360 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 RNF113AO15541 343 aaKnown RBP15.93■□□□□ 0.14
CPSF4-210ENST00000469897 MB21D1Q8N884 522 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 SHCBP1Q8NEM2 672 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 GPATCH3Q96I76 525 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.93■□□□□ 0.14
CPSF4-210ENST00000469897 SENP6Q9GZR1 1112 aaPredicted RBP15.93■□□□□ 0.14
CPSF4-210ENST00000469897 MROH8Q9H579 483 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 MKNK2Q9HBH9 465 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 FBXO28Q9NVF7 368 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 PCDHB15Q9Y5E8 787 aa15.93■□□□□ 0.14
CPSF4-210ENST00000469897 FOCADQ5VW36 1801 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 A0A1W2PPC1 479 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 WDR46O15213 610 aaKnown RBP15.92■□□□□ 0.14
CPSF4-210ENST00000469897 IGHA2P01877 340 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 BMP8BP34820 402 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 TMEM132BQ14DG7 1078 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 LRRC26Q2I0M4 334 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 SBK1Q52WX2 424 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 PRAMEF19Q5SWL8 479 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 APPBP2Q92624 585 aa15.92■□□□□ 0.14
CPSF4-210ENST00000469897 ARPP21Q9UBL0 812 aaPredicted RBP15.92■□□□□ 0.14
CPSF4-210ENST00000469897 SOX1O00570 391 aaPredicted RBP15.91■□□□□ 0.14
CPSF4-210ENST00000469897 APPP05067 770 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 FAM83BQ5T0W9 1011 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 ANO1Q5XXA6 986 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 OLFML2BQ68BL8 750 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 GIMAP6Q6P9H5 292 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 LRCH3Q96II8 777 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 ADAMTS5Q9UNA0 930 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 CDK5RAP2Q96SN8 1893 aa15.91■□□□□ 0.14
CPSF4-210ENST00000469897 PLXNB2O15031 1838 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 PATL2C9JE40 543 aaKnown RBP15.9■□□□□ 0.14
CPSF4-210ENST00000469897 GPAA1O43292 621 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 MSCO60682 206 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 ZFYP08048 801 aaPredicted RBP15.9■□□□□ 0.14
CPSF4-210ENST00000469897 FCER1AP12319 257 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 CYBAP13498 195 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 RASA1P20936 1047 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 MAGEA10P43363 369 aaPredicted RBP15.9■□□□□ 0.14
CPSF4-210ENST00000469897 GJC2Q5T442 439 aaPredicted RBP15.9■□□□□ 0.14
CPSF4-210ENST00000469897 GOPCQ9HD26 462 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 SLC5A4Q9NY91 659 aa15.9■□□□□ 0.14
CPSF4-210ENST00000469897 CLIP2Q9UDT6 1046 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms