RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 VGLL2Q8N8G2 317 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 LINC00301Q8NCQ3 95 aa13.96□□□□□ -0.17
USP11-206ENST00000469080 NAT10Q9H0A0 1025 aaKnown RBP13.96□□□□□ -0.17
USP11-206ENST00000469080 APBA3O96018 575 aa13.96□□□□□ -0.18
USP11-206ENST00000469080 TEX11Q8IYF3 940 aa13.96□□□□□ -0.18
USP11-206ENST00000469080 CNNM2Q9H8M5 875 aa13.96□□□□□ -0.18
USP11-206ENST00000469080 ABCC12Q96J65 1359 aa13.96□□□□□ -0.18
USP11-206ENST00000469080 ATP1A3P13637 1013 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 SUGP1Q8IWZ8 645 aaKnown RBP13.95□□□□□ -0.18
USP11-206ENST00000469080 KCNG4Q8TDN1 519 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 SH3RF3Q8TEJ3 882 aaPredicted RBP13.95□□□□□ -0.18
USP11-206ENST00000469080 CEP89Q96ST8 783 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 NYXQ9GZU5 481 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 DBNDD1Q9H9R9 158 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 TACC3Q9Y6A5 838 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 SERPINB2P05120 415 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 PDE4BQ07343 736 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 SMARCC2Q8TAQ2 1214 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 UBXN4Q92575 508 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 KCNB2Q92953 911 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 PLEKHA4Q9H4M7 779 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 GPCPD1Q9NPB8 672 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 KIAA0825Q8IV33 1275 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 TMEM87BQ96K49 555 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 ZHX3Q9H4I2 956 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 SERTAD1Q9UHV2 236 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 ZMYM6O95789 1325 aa13.95□□□□□ -0.18
USP11-206ENST00000469080 FRMPD2Q68DX3 1309 aaPredicted RBP13.95□□□□□ -0.18
USP11-206ENST00000469080 USP27XA6NNY8 438 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 GBP6Q6ZN66 633 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 ILDR1Q86SU0 546 aaPredicted RBP13.94□□□□□ -0.18
USP11-206ENST00000469080 PLA2G12BQ9BX93 195 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 ADAM21Q9UKJ8 722 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 IGDCC4Q8TDY8 1250 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 EPSTI1Q96J88 318 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 KDM3BQ7LBC6 1761 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 KIF2AO00139 706 aaPredicted RBP13.94□□□□□ -0.18
USP11-206ENST00000469080 CAND2O75155 1236 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 CCDC96Q2M329 555 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 LRRC47Q8N1G4 583 aaKnown RBP13.94□□□□□ -0.18
USP11-206ENST00000469080 ENAHQ8N8S7 591 aaPredicted RBP13.94□□□□□ -0.18
USP11-206ENST00000469080 PCMTD1Q96MG8 357 aaPredicted RBP13.94□□□□□ -0.18
USP11-206ENST00000469080 ZSCAN10Q96SZ4 725 aaPredicted RBP13.94□□□□□ -0.18
USP11-206ENST00000469080 ZC3H12CQ9C0D7 883 aaKnown RBP13.94□□□□□ -0.18
USP11-206ENST00000469080 RCOR1Q9UKL0 485 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 KCNH3Q9ULD8 1083 aa13.94□□□□□ -0.18
USP11-206ENST00000469080 RPS6KA4O75676 772 aa13.93□□□□□ -0.18
USP11-206ENST00000469080 SETQ01105 290 aaPredicted RBP13.93□□□□□ -0.18
USP11-206ENST00000469080 LONRF3Q496Y0 759 aa13.93□□□□□ -0.18
USP11-206ENST00000469080 BSDC1Q9NW68 430 aaPredicted RBP13.93□□□□□ -0.18
USP11-206ENST00000469080 RIC1Q4ADV7 1423 aa13.93□□□□□ -0.18
USP11-206ENST00000469080 LMO7Q8WWI1 1683 aa13.93□□□□□ -0.18
USP11-206ENST00000469080 SKILP12757 684 aa13.93□□□□□ -0.18
USP11-206ENST00000469080 NARFQ9UHQ1 456 aa13.93□□□□□ -0.18
USP11-206ENST00000469080 TNS2Q63HR2 1409 aa13.93□□□□□ -0.18
USP11-206ENST00000469080 LRRC37A3O60309 1634 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 H2AFXP16104 143 aaPredicted RBP13.92□□□□□ -0.18
USP11-206ENST00000469080 FGFR2P21802 821 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 JPH2Q9BR39 696 aaPredicted RBP13.92□□□□□ -0.18
USP11-206ENST00000469080 LRRC4BQ9NT99 713 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 ZNF75DP51815 510 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 UBE4AQ14139 1066 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 ZYXQ15942 572 aaKnown RBP13.92□□□□□ -0.18
USP11-206ENST00000469080 CCDC144BQ3MJ40 725 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 JAKMIP3Q5VZ66 844 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 USP17L2Q6R6M4 530 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 STAG2Q8N3U4 1231 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 CRACR2BQ8N4Y2 399 aaPredicted RBP13.92□□□□□ -0.18
USP11-206ENST00000469080 GJD4Q96KN9 370 aaPredicted RBP13.92□□□□□ -0.18
USP11-206ENST00000469080 GGA1Q9UJY5 639 aa13.92□□□□□ -0.18
USP11-206ENST00000469080 CCDC194A0A1B0GVG4 234 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 ADALQ6DHV7 355 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 NOSTRINQ8IVI9 506 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 LRRN4CLQ8ND94 238 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 CACTINQ8WUQ7 758 aaKnown RBP13.91□□□□□ -0.18
USP11-206ENST00000469080 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.91□□□□□ -0.18
USP11-206ENST00000469080 XPO4Q9C0E2 1151 aaKnown RBP13.91□□□□□ -0.18
USP11-206ENST00000469080 ZSWIM4Q9H7M6 989 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 VPS18Q9P253 973 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 PCDHA5Q9Y5H7 936 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 TRIM75PA6NK02 468 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 NRDCO43847 1150 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 BAG3O95817 575 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 GNAT2P19087 354 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 PAX7P23759 505 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 BTDP43251 543 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 TMEM87AQ8NBN3 555 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 KIAA1468Q9P260 1216 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 PHRF1Q9P1Y6 1649 aaKnown RBP13.91□□□□□ -0.18
USP11-206ENST00000469080 TCRBV5S4A2TA0A5A2 114 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 UBASH3AP57075 661 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 SNAP25P60880 206 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 LETM2Q2VYF4 491 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 RBM26Q5T8P6 1007 aaKnown RBP13.91□□□□□ -0.18
USP11-206ENST00000469080 WASF1Q92558 559 aa13.91□□□□□ -0.18
USP11-206ENST00000469080 CPSF2Q9P2I0 782 aaKnown RBP13.91□□□□□ -0.18
USP11-206ENST00000469080 USP8P40818 1118 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 LIG3P49916 1009 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 PLCD1P51178 756 aa13.9□□□□□ -0.18
USP11-206ENST00000469080 ZKSCAN8Q15776 578 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms