RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TRIM43Q96BQ3 446 aaPredicted RBP14.88□□□□□ -0.03
UBR4-211ENST00000467272 FEZ1Q99689 392 aa14.88□□□□□ -0.03
UBR4-211ENST00000467272 LBHD1Q9BQE6 289 aaPredicted RBP14.88□□□□□ -0.03
UBR4-211ENST00000467272 PDLIM7Q9NR12 457 aa14.88□□□□□ -0.03
UBR4-211ENST00000467272 SURF6O75683 361 aaKnown RBP14.87□□□□□ -0.03
UBR4-211ENST00000467272 SMAD3P84022 425 aaKnown RBP14.87□□□□□ -0.03
UBR4-211ENST00000467272 COG2Q14746 738 aa14.87□□□□□ -0.03
UBR4-211ENST00000467272 SEPT2Q15019 361 aa14.87□□□□□ -0.03
UBR4-211ENST00000467272 ARRDC4Q8NCT1 418 aa14.87□□□□□ -0.03
UBR4-211ENST00000467272 CLUAP1Q96AJ1 413 aa14.87□□□□□ -0.03
UBR4-211ENST00000467272 FAM161BQ96MY7 647 aa14.87□□□□□ -0.03
UBR4-211ENST00000467272 SPATC1LQ9H0A9 340 aa14.87□□□□□ -0.03
UBR4-211ENST00000467272 HOXC10Q9NYD6 342 aa14.87□□□□□ -0.03
UBR4-211ENST00000467272 IDH1O75874 414 aaKnown RBP14.86□□□□□ -0.03
UBR4-211ENST00000467272 ERCC3P19447 782 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 ITGB8P26012 769 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 USP5P45974 858 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 ZNF697Q5TEC3 545 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 SH3RF1Q7Z6J0 888 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 CCDC8Q9H0W5 538 aaPredicted RBP14.86□□□□□ -0.03
UBR4-211ENST00000467272 ADAMTS5Q9UNA0 930 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 IVNS1ABPQ9Y6Y0 642 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 MYH1P12882 1939 aa14.86□□□□□ -0.03
UBR4-211ENST00000467272 ROBO3Q96MS0 1386 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 TCRBV5S4A2TA0A5A2 114 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 CNGA1P29973 690 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 LRRC41Q15345 812 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 TRIM60Q495X7 471 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 MB21D1Q8N884 522 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 BADQ92934 168 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 CABP5Q9NP86 173 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 PHF24Q9UPV7 400 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 ATP11BQ9Y2G3 1177 aa14.85□□□□□ -0.03
UBR4-211ENST00000467272 DSG3P32926 999 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 EPHB4P54760 987 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 MAP3K12Q12852 859 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 WDR78Q5VTH9 848 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 DPP9Q86TI2 863 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 FRAT1Q92837 279 aaPredicted RBP14.84□□□□□ -0.03
UBR4-211ENST00000467272 MAML3Q96JK9 1138 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 MROH8Q9H579 483 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 CWC22Q9HCG8 908 aaKnown RBP14.84□□□□□ -0.03
UBR4-211ENST00000467272 NRBP1Q9UHY1 535 aa14.84□□□□□ -0.03
UBR4-211ENST00000467272 CHD7Q9P2D1 2997 aa14.83□□□□□ -0.03
UBR4-211ENST00000467272 RLBP1P12271 317 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 ADCYAP1R1P41586 468 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 FAM47AQ5JRC9 791 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 PRAMEF19Q5SWL8 479 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 ZKSCAN2Q63HK3 967 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 MAFAQ8NHW3 353 aaPredicted RBP14.83□□□□□ -0.04
UBR4-211ENST00000467272 C1orf115Q9H7X2 142 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 DCP1AQ9NPI6 582 aaPredicted RBP14.83□□□□□ -0.04
UBR4-211ENST00000467272 PRKAG2Q9UGJ0 569 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 TMX2Q9Y320 296 aa14.83□□□□□ -0.04
UBR4-211ENST00000467272 TMEM265A0A087WTH1 108 aa14.82□□□□□ -0.04
UBR4-211ENST00000467272 KBTBD13C9JR72 458 aa14.82□□□□□ -0.04
UBR4-211ENST00000467272 KIAA0355O15063 1070 aa14.82□□□□□ -0.04
UBR4-211ENST00000467272 PDE6AP16499 860 aa14.82□□□□□ -0.04
UBR4-211ENST00000467272 TLE2Q04725 743 aa14.82□□□□□ -0.04
UBR4-211ENST00000467272 OS9Q13438 667 aaPredicted RBP14.82□□□□□ -0.04
UBR4-211ENST00000467272 TMEM132BQ14DG7 1078 aa14.82□□□□□ -0.04
UBR4-211ENST00000467272 TMEM179Q6ZVK1 233 aa14.82□□□□□ -0.04
UBR4-211ENST00000467272 MAGEB6P1A0A0J9YX57 407 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 CCER2I3L3R5 266 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 ANO1Q5XXA6 986 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 CEP85Q6P2H3 762 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 SLC44A5Q8NCS7 719 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 REPS2Q8NFH8 660 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 MYLIPQ8WY64 445 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 ATG4CQ96DT6 458 aa14.81□□□□□ -0.04
UBR4-211ENST00000467272 XIRP2A4UGR9 3374 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 ZNF865P0CJ78 1059 aaPredicted RBP14.8□□□□□ -0.04
UBR4-211ENST00000467272 CYP2D6P10635 497 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 ZNF792Q3KQV3 632 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 SLC9C2Q5TAH2 1124 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 CCSAPQ6IQ19 270 aaPredicted RBP14.8□□□□□ -0.04
UBR4-211ENST00000467272 ANKRD33Q7Z3H0 272 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.8□□□□□ -0.04
UBR4-211ENST00000467272 FERMT2Q96AC1 680 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 TANGO6Q9C0B7 1094 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 VCPKMTQ9H867 229 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 PRDM6Q9NQX0 595 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 MCM9Q9NXL9 1143 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 DIS3Q9Y2L1 958 aaKnown RBP14.8□□□□□ -0.04
UBR4-211ENST00000467272 TACC3Q9Y6A5 838 aa14.8□□□□□ -0.04
UBR4-211ENST00000467272 SMIM22K7EJ46 135 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 ADAMTS4O75173 837 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 POLR3DP05423 398 aaPredicted RBP14.79□□□□□ -0.04
UBR4-211ENST00000467272 AKR1B1P15121 316 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 TAL1P17542 331 aaPredicted RBP14.79□□□□□ -0.04
UBR4-211ENST00000467272 PARP14Q460N5 1801 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 CLEC10AQ8IUN9 316 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 LCORLQ8N3X6 602 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 TOX2Q96NM4 488 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 TINF2Q9BSI4 451 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 CRNKL1Q9BZJ0 848 aaKnown RBP14.79□□□□□ -0.04
UBR4-211ENST00000467272 PRDM5Q9NQX1 630 aaPredicted RBP14.79□□□□□ -0.04
UBR4-211ENST00000467272 SLC5A4Q9NY91 659 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 SWAP70Q9UH65 585 aa14.79□□□□□ -0.04
UBR4-211ENST00000467272 ZNF214Q9UL59 606 aaPredicted RBP14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms