RNA–Protein interactions for RNA: ENST00000465369.5

EDEM1-206, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 5

Gene EDEM1, Length 1,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-206ENST00000465369 USP40Q9NVE5 1235 aa27.13■■□□□ 1.93
EDEM1-206ENST00000465369 FAM13BQ9NYF5 915 aa27.13■■□□□ 1.93
EDEM1-206ENST00000465369 KCNH3Q9ULD8 1083 aa27.13■■□□□ 1.93
EDEM1-206ENST00000465369 GOLGA6L19H0YKK7 550 aa27.12■■□□□ 1.93
EDEM1-206ENST00000465369 NOVP48745 357 aa27.12■■□□□ 1.93
EDEM1-206ENST00000465369 STRIP1Q5VSL9 837 aa27.12■■□□□ 1.93
EDEM1-206ENST00000465369 C11orf57Q6ZUT1 292 aaPredicted RBP27.12■■□□□ 1.93
EDEM1-206ENST00000465369 ELOA2Q8IYF1 753 aaPredicted RBP27.12■■□□□ 1.93
EDEM1-206ENST00000465369 FAM177A1Q8N128 213 aaPredicted RBP27.12■■□□□ 1.93
EDEM1-206ENST00000465369 PALM3A6NDB9 673 aaPredicted RBP27.11■■□□□ 1.93
EDEM1-206ENST00000465369 PICALMQ13492 652 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 CC2D2BQ6DHV5 1058 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 STAG2Q8N3U4 1231 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 DBNDD1Q9H9R9 158 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 TOP1P11387 765 aaKnown RBP27.11■■□□□ 1.93
EDEM1-206ENST00000465369 TRAPPC10P48553 1259 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 GABPAQ06546 454 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 MXD3Q9BW11 206 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 PLIN4Q96Q06 1357 aa27.11■■□□□ 1.93
EDEM1-206ENST00000465369 SWAP70Q9UH65 585 aa27.1■■□□□ 1.93
EDEM1-206ENST00000465369 ATP2B1P20020 1258 aa27.09■■□□□ 1.93
EDEM1-206ENST00000465369 SCNN1DP51172 638 aa27.09■■□□□ 1.93
EDEM1-206ENST00000465369 BECN2A8MW95 431 aa27.09■■□□□ 1.93
EDEM1-206ENST00000465369 HDLBPQ00341 1268 aaKnown RBP27.09■■□□□ 1.93
EDEM1-206ENST00000465369 EARS2Q5JPH6 523 aaKnown RBP27.09■■□□□ 1.93
EDEM1-206ENST00000465369 APOBEC3HQ6NTF7 200 aaKnown RBP27.09■■□□□ 1.93
EDEM1-206ENST00000465369 CDC42EP5Q6NZY7 148 aa27.09■■□□□ 1.93
EDEM1-206ENST00000465369 ERCC4Q92889 916 aaPredicted RBP27.09■■□□□ 1.93
EDEM1-206ENST00000465369 DDX4Q9NQI0 724 aaKnown RBP27.09■■□□□ 1.93
EDEM1-206ENST00000465369 EIF2AK3Q9NZJ5 1116 aaKnown RBP27.09■■□□□ 1.93
EDEM1-206ENST00000465369 MYO3BQ8WXR4 1341 aa27.08■■□□□ 1.93
EDEM1-206ENST00000465369 SMARCA1P28370 1054 aa27.08■■□□□ 1.93
EDEM1-206ENST00000465369 CHRNA5P30532 468 aa27.08■■□□□ 1.93
EDEM1-206ENST00000465369 CEP95Q96GE4 821 aa27.08■■□□□ 1.93
EDEM1-206ENST00000465369 ZDHHC15Q96MV8 337 aa27.08■■□□□ 1.93
EDEM1-206ENST00000465369 SERPINB13Q9UIV8 391 aa27.08■■□□□ 1.93
EDEM1-206ENST00000465369 HOOK1Q9UJC3 728 aaKnown RBP27.08■■□□□ 1.93
EDEM1-206ENST00000465369 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP27.08■■□□□ 1.92
EDEM1-206ENST00000465369 GOLGA6L6A8MZA4 724 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 TPM3P06753 285 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 CRKP46108 304 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 GALNT17Q6IS24 598 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 KRBA2Q6ZNG9 492 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 CCDC148Q8NFR7 591 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 C7orf43Q8WVR3 580 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 BPIFA3Q9BQP9 254 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 SPZ1Q9BXG8 430 aa27.08■■□□□ 1.92
EDEM1-206ENST00000465369 OSBPL5Q9H0X9 879 aaPredicted RBP27.08■■□□□ 1.92
EDEM1-206ENST00000465369 SLX4Q8IY92 1834 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 FAM205CA6NFA0 338 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 ECE2O60344 883 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 PARP1P09874 1014 aaKnown RBP27.07■■□□□ 1.92
EDEM1-206ENST00000465369 NLRP12P59046 1061 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 CNNM3Q8NE01 707 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 SUPT20HQ8NEM7 779 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 PIBF1Q8WXW3 757 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 FERMT2Q96AC1 680 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 TUBE1Q9UJT0 475 aa27.07■■□□□ 1.92
EDEM1-206ENST00000465369 KLRF2D3W0D1 207 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 SARM1Q6SZW1 724 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 ARHGAP30Q7Z6I6 1101 aaPredicted RBP27.06■■□□□ 1.92
EDEM1-206ENST00000465369 ZNF500O60304 480 aaPredicted RBP27.06■■□□□ 1.92
EDEM1-206ENST00000465369 HLA-DOAP06340 250 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 TTC38Q5R3I4 469 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 DACT2Q5SW24 774 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 BLIDQ8IZY5 108 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 TRIM5Q9C035 493 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 PCDHA4Q9UN74 947 aa27.06■■□□□ 1.92
EDEM1-206ENST00000465369 CYTH3O43739 400 aa27.05■■□□□ 1.92
EDEM1-206ENST00000465369 LONRF3Q496Y0 759 aa27.05■■□□□ 1.92
EDEM1-206ENST00000465369 DHX40Q8IX18 779 aaKnown RBP27.05■■□□□ 1.92
EDEM1-206ENST00000465369 VEGFAP15692 232 aaPredicted RBP27.04■■□□□ 1.92
EDEM1-206ENST00000465369 GRIPAP1Q4V328 841 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 PLA2G4DQ86XP0 818 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 MTMR4Q9NYA4 1195 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 GRIN1Q05586 938 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 PIK3AP1Q6ZUJ8 805 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 DAGLBQ8NCG7 672 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 KCNQ5Q9NR82 932 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 BARHL2Q9NY43 387 aa27.04■■□□□ 1.92
EDEM1-206ENST00000465369 ZNF75DP51815 510 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 KIAA2012Q0VF49 1180 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 SLC35G1Q2M3R5 365 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 DPCR1Q3MIW9 517 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 SPECC1Q5M775 1068 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 KANK3Q6NY19 840 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 GPKOWQ92917 476 aaPredicted RBP eCLIP27.03■■□□□ 1.928e-6■■■■□ 26
EDEM1-206ENST00000465369 CSRNP2Q9H175 543 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 EHD4Q9H223 541 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 ZNF219Q9P2Y4 722 aaPredicted RBP27.03■■□□□ 1.92
EDEM1-206ENST00000465369 MTMR7Q9Y216 660 aa27.03■■□□□ 1.92
EDEM1-206ENST00000465369 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP27.03■■□□□ 1.92
EDEM1-206ENST00000465369 A0A087WWV3 80 aa27.02■■□□□ 1.92
EDEM1-206ENST00000465369 IGKV6D-41A0A0C4DH26 115 aa27.02■■□□□ 1.92
EDEM1-206ENST00000465369 ATP2C1P98194 919 aaPredicted RBP27.02■■□□□ 1.92
EDEM1-206ENST00000465369 WWC2Q6AWC2 1192 aa27.02■■□□□ 1.92
EDEM1-206ENST00000465369 KIAA0825Q8IV33 1275 aa27.02■■□□□ 1.92
EDEM1-206ENST00000465369 CCDC12Q8WUD4 166 aaPredicted RBP27.02■■□□□ 1.92
EDEM1-206ENST00000465369 C10orf71Q711Q0 1435 aa27.02■■□□□ 1.92
EDEM1-206ENST00000465369 GOLGA8HP0CJ92 632 aa27.01■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms