RNA–Protein interactions for RNA: ENST00000462723.1

RPA3-205, Transcript of replication protein A3, humanhuman

TSL 2

Gene RPA3, Length 989 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3-205ENST00000462723 LLPHQ9BRT6 129 aaKnown RBP9.58□□□□□ -0.88
RPA3-205ENST00000462723 TRIM34Q9BYJ4 488 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 EHD4Q9H223 541 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 KIAA1468Q9P260 1216 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 PI4KBQ9UBF8 816 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 ZNF70Q9UC06 446 aaPredicted RBP9.58□□□□□ -0.88
RPA3-205ENST00000462723 FAM198AQ9UFP1 575 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 SERPINB13Q9UIV8 391 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 BRPF3Q9ULD4 1205 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 SLC12A7Q9Y666 1083 aa9.58□□□□□ -0.88
RPA3-205ENST00000462723 COL2A1P02458 1487 aaPredicted RBP9.58□□□□□ -0.88
RPA3-205ENST00000462723 ZNF541Q9H0D2 1346 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 GOLGB1Q14789 3259 aaKnown RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 CLRN2A0PK11 232 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 H7C1D1 291 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 RASA1P20936 1047 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 METAP2P50579 478 aaKnown RBP eCLIP9.57□□□□□ -0.88
RPA3-205ENST00000462723 RCAN1P53805 252 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 CCT2P78371 535 aaKnown RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 ST3GAL1Q11201 340 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 SCRN1Q12765 414 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 SEC23AQ15436 765 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 GPR162Q16538 588 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 IFIT1BQ5T764 474 aaKnown RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 CPLX2Q6PUV4 134 aaKnown RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 APOA5Q6Q788 366 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 GPC2Q8N158 579 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 CRACR2BQ8N4Y2 399 aaPredicted RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 ENAHQ8N8S7 591 aaPredicted RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 SLC44A5Q8NCS7 719 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 ZBED3Q96IU2 234 aaPredicted RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 VEZTQ9HBM0 779 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 RNF181Q9P0P0 153 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 CNOT7Q9UIV1 285 aaKnown RBP9.57□□□□□ -0.88
RPA3-205ENST00000462723 KIF3AQ9Y496 699 aa9.57□□□□□ -0.88
RPA3-205ENST00000462723 ATRNL1Q5VV63 1379 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 TCP10L2B9ZVM9 353 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 CPLX1O14810 134 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 GRIN3BO60391 1043 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 CDKL5O76039 1030 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 CALM1P0DP23 149 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 CALM2P0DP24 149 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 CALM3P0DP25 149 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 PDIA4P13667 645 aaKnown RBP9.56□□□□□ -0.88
RPA3-205ENST00000462723 PDCP20941 246 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 GJB2P29033 226 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 TNNI2P48788 182 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 HMGN5P82970 282 aaKnown RBP9.56□□□□□ -0.88
RPA3-205ENST00000462723 GABPAQ06546 454 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 CATIPQ7Z7H3 387 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 MICU3Q86XE3 530 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 DGKHQ86XP1 1220 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 FOXP4Q8IVH2 680 aaPredicted RBP9.56□□□□□ -0.88
RPA3-205ENST00000462723 ZFPM1Q8IX07 1006 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 ZNF654Q8IZM8 581 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 NEDD1Q8NHV4 660 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 FAM151AQ8WW52 585 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 SENP2Q9HC62 589 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 NCOA5Q9HCD5 579 aaKnown RBP9.56□□□□□ -0.88
RPA3-205ENST00000462723 TCP11L1Q9NUJ3 509 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 TSR3Q9UJK0 312 aaKnown RBP9.56□□□□□ -0.88
RPA3-205ENST00000462723 HPS5Q9UPZ3 1129 aa9.56□□□□□ -0.88
RPA3-205ENST00000462723 CCDC196A0A1B0GTZ2 297 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 SHTN1A0MZ66 631 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 DDTLA6NHG4 134 aaPredicted RBP9.55□□□□□ -0.88
RPA3-205ENST00000462723 GOLGA8AA7E2F4 631 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 WNT10BO00744 389 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 SOCS7O14512 581 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 DDAH1O94760 285 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 TNFAIP1Q13829 316 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 PPP2R5BQ15173 497 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 NBPF9Q3BBW0 867 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 RBM26Q5T8P6 1007 aaKnown RBP9.55□□□□□ -0.88
RPA3-205ENST00000462723 C9orf131Q5VYM1 1079 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 SH3BP5LQ7L8J4 393 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 FAM83AQ86UY5 434 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 FAM184AQ8NB25 1140 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 ANKS1AQ92625 1134 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 CCDC17Q96LX7 622 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 CSRNP1Q96S65 589 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 KAT14Q9H8E8 782 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 GPRC5DQ9NZD1 345 aa9.55□□□□□ -0.88
RPA3-205ENST00000462723 V9GY48 417 aaPredicted RBP9.55□□□□□ -0.88
RPA3-205ENST00000462723 WDR33Q9C0J8 1336 aaKnown RBP9.55□□□□□ -0.88
RPA3-205ENST00000462723 SIPA1L1O43166 1804 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 CNTNAP1P78357 1384 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 NID2Q14112 1375 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 PLIN4Q96Q06 1357 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 PTPDC1A2A3K4 754 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 NMT2O60551 498 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 LMOD1P29536 600 aaPredicted RBP9.54□□□□□ -0.88
RPA3-205ENST00000462723 SHMT1P34896 483 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 RAB3GAP1Q15042 981 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 RTN1Q16799 776 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 KIF4BQ2VIQ3 1234 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 TBC1D10BQ4KMP7 808 aaPredicted RBP9.54□□□□□ -0.88
RPA3-205ENST00000462723 SAMD7Q7Z3H4 446 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 METTL16Q86W50 562 aaKnown RBP9.54□□□□□ -0.88
RPA3-205ENST00000462723 RAB11FIP4Q86YS3 637 aa9.54□□□□□ -0.88
RPA3-205ENST00000462723 NSUN7Q8NE18 718 aaKnown RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms