RNA–Protein interactions for RNA: ENST00000462122.1

TRAF3IP1-204, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 922 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-204ENST00000462122 NOM1Q5C9Z4 860 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TREML2Q5T2D2 321 aa13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 RALYLQ86SE5 291 aaKnown RBP13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 IQCA1Q86XH1 822 aa13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 STX8Q9UNK0 236 aa13.76□□□□□ -0.21
TRAF3IP1-204ENST00000462122 E7EWF7 191 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 SLC27A2O14975 620 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 KDM4AO75164 1064 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 OSBPP22059 807 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 NOVP48745 357 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CRHR2Q13324 411 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 DGKZQ13574 1117 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CREB3L3Q68CJ9 461 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 NCOA7Q8NI08 942 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 IL17RBQ9NRM6 502 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CLIP2Q9UDT6 1046 aa13.75□□□□□ -0.21
TRAF3IP1-204ENST00000462122 B4E1Z4 1266 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L15C9J2P7 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L13C9JLJ4 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L11C9JVI0 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L18D6R9N7 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L22D6RA61 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L17D6RBQ6 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L19D6RCP7 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L20D6RJB6 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 WDR46O15213 610 aaKnown RBP13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TLR2O60603 784 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TBC1D8O95759 1140 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 HSPA8P11142 646 aaKnown RBP13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ZKSCAN1P17029 563 aaPredicted RBP13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 IRX3P78415 501 aaPredicted RBP13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 USP17L24Q0WX57 530 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 GMCL1P1Q8NEA9 526 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 SMCR8Q8TEV9 937 aaPredicted RBP13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TTC14Q96N46 770 aa13.74□□□□□ -0.21
TRAF3IP1-204ENST00000462122 F5H6K3 240 aa13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 NMT2O60551 498 aa13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CYP2C8P10632 490 aa13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 KLRC3Q07444 240 aa13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 DGKHQ86XP1 1220 aa13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 GTF3C2Q8WUA4 911 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ZSCAN10Q96SZ4 725 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ASCC2Q9H1I8 757 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 RPAP3Q9H6T3 665 aaPredicted RBP13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TSKSQ9UJT2 592 aa13.73□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ADGRA2Q96PE1 1338 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 GPR25O00155 361 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TOP1P11387 765 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 HSPA4P34932 840 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 KRT32Q14532 448 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TSGA10IPQ3SY00 556 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 CATSPERGQ6ZRH7 1159 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 STOX1Q6ZVD7 989 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 SPICE1Q8N0Z3 855 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 LRRC47Q8N1G4 583 aaKnown RBP13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 UBAC1Q9BSL1 405 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 PRDM10Q9NQV6 1147 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ZSWIM5Q9P217 1185 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TAF6LQ9Y6J9 622 aa13.72□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TNKSO95271 1327 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 RAD21O60216 631 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 NDUFB10O96000 172 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 MCCP23508 829 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 GCLCP48506 637 aaPredicted RBP13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 LBX1P52954 281 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 HERVK_113P62684 666 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 SART3Q15020 963 aaKnown RBP13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 KIAA1755Q5JYT7 1200 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 C17orf99Q6UX52 265 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 NKX2-3Q8TAU0 364 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ANKS1AQ92625 1134 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 KCNB2Q92953 911 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 ZKSCAN3Q9BRR0 538 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 MTA3Q9BTC8 594 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 TANGO6Q9C0B7 1094 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 R3HDMLQ9H3Y0 253 aa13.71□□□□□ -0.21
TRAF3IP1-204ENST00000462122 MYPNQ86TC9 1320 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 ERICH2A1L162 156 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 FKTNO75072 461 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 SP3Q02447 781 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 COG2Q14746 738 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 FAM110CQ1W6H9 321 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 SLFN13Q68D06 897 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 RCSD1Q6JBY9 416 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 LBX2Q6XYB7 198 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 CYB5R4Q7L1T6 521 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 MB21D2Q8IYB1 491 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 ENAHQ8N8S7 591 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 ZNF296Q8WUU4 475 aaPredicted RBP13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 GMCL1Q96IK5 515 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 TMEM47Q9BQJ4 181 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 USP26Q9BXU7 913 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 HOXC10Q9NYD6 342 aa13.7□□□□□ -0.22
TRAF3IP1-204ENST00000462122 FLOT1O75955 427 aa13.69□□□□□ -0.22
TRAF3IP1-204ENST00000462122 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
TRAF3IP1-204ENST00000462122 BCRP11274 1271 aa13.69□□□□□ -0.22
TRAF3IP1-204ENST00000462122 BMP3P12645 472 aa13.69□□□□□ -0.22
TRAF3IP1-204ENST00000462122 MCM5P33992 734 aa13.69□□□□□ -0.22
TRAF3IP1-204ENST00000462122 SLC1A4P43007 532 aa13.69□□□□□ -0.22
TRAF3IP1-204ENST00000462122 FAM83BQ5T0W9 1011 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms