RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ROBO3Q96MS0 1386 aa17.78■□□□□ 0.44
ATG4B-213ENST00000460211 ATP2B2Q01814 1243 aa17.77■□□□□ 0.44
ATG4B-213ENST00000460211 PPARAQ07869 468 aa17.77■□□□□ 0.44
ATG4B-213ENST00000460211 ALX1Q15699 326 aa17.77■□□□□ 0.44
ATG4B-213ENST00000460211 FAM110CQ1W6H9 321 aa17.77■□□□□ 0.44
ATG4B-213ENST00000460211 TTC22Q5TAA0 569 aa17.77■□□□□ 0.44
ATG4B-213ENST00000460211 CENPQQ7L2Z9 268 aaPredicted RBP17.77■□□□□ 0.44
ATG4B-213ENST00000460211 NKX2-3Q8TAU0 364 aa17.77■□□□□ 0.44
ATG4B-213ENST00000460211 PTPRFP10586 1907 aa17.76■□□□□ 0.43
ATG4B-213ENST00000460211 CCDC171Q6TFL3 1326 aa17.76■□□□□ 0.43
ATG4B-213ENST00000460211 RASA1P20936 1047 aa17.76■□□□□ 0.43
ATG4B-213ENST00000460211 GJA8P48165 433 aa17.76■□□□□ 0.43
ATG4B-213ENST00000460211 CWC27Q6UX04 472 aaKnown RBP17.76■□□□□ 0.43
ATG4B-213ENST00000460211 LPAR1Q92633 364 aa17.76■□□□□ 0.43
ATG4B-213ENST00000460211 P2RX7Q99572 595 aaKnown RBP17.76■□□□□ 0.43
ATG4B-213ENST00000460211 GABRQQ9UN88 632 aa17.76■□□□□ 0.43
ATG4B-213ENST00000460211 TMX2Q9Y320 296 aa17.76■□□□□ 0.43
ATG4B-213ENST00000460211 A0A1W2PRG0 241 aa17.75■□□□□ 0.43
ATG4B-213ENST00000460211 CENPBP07199 599 aaPredicted RBP17.75■□□□□ 0.43
ATG4B-213ENST00000460211 GJB1P08034 283 aa17.75■□□□□ 0.43
ATG4B-213ENST00000460211 HSPD1P10809 573 aaKnown RBP17.75■□□□□ 0.43
ATG4B-213ENST00000460211 VCAM1P19320 739 aa17.75■□□□□ 0.43
ATG4B-213ENST00000460211 HERVK_113P62684 666 aa17.75■□□□□ 0.43
ATG4B-213ENST00000460211 UBXN2AP68543 259 aa17.75■□□□□ 0.43
ATG4B-213ENST00000460211 VPS53Q5VIR6 699 aa17.75■□□□□ 0.43
ATG4B-213ENST00000460211 CATSPERGQ6ZRH7 1159 aa17.75■□□□□ 0.43
ATG4B-213ENST00000460211 RANBP2P49792 3224 aaKnown RBP17.74■□□□□ 0.43
ATG4B-213ENST00000460211 TNPO2O14787 897 aaKnown RBP17.74■□□□□ 0.43
ATG4B-213ENST00000460211 PRDM1O75626 825 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 TSPY3P0CV98 308 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 TSPY8P0CW00 308 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 EEF2P13639 858 aaKnown RBP17.74■□□□□ 0.43
ATG4B-213ENST00000460211 PPP4R3BQ5MIZ7 849 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 UBE2Q1Q7Z7E8 422 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 ZNF589Q86UQ0 364 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-213ENST00000460211 GPRC5AQ8NFJ5 357 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 COA7Q96BR5 231 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 HTATIP2Q9BUP3 242 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 UNC93B1Q9H1C4 597 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 RPAP3Q9H6T3 665 aaPredicted RBP17.74■□□□□ 0.43
ATG4B-213ENST00000460211 VCPKMTQ9H867 229 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 GOPCQ9HD26 462 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 ANAPC4Q9UJX5 808 aa17.74■□□□□ 0.43
ATG4B-213ENST00000460211 FARP2O94887 1054 aaPredicted RBP17.73■□□□□ 0.43
ATG4B-213ENST00000460211 FGAP02671 866 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 SIAH1Q8IUQ4 282 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 CCAR1Q8IX12 1150 aaKnown RBP17.73■□□□□ 0.43
ATG4B-213ENST00000460211 U2AF1L4Q8WU68 220 aaKnown RBP17.73■□□□□ 0.43
ATG4B-213ENST00000460211 RUFY2Q8WXA3 655 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 CCDC136Q96JN2 1154 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 HOXC10Q9NYD6 342 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 NYAP2Q9P242 653 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 MORF4L1Q9UBU8 362 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 LOC285556D6RIA3 1793 aa17.73■□□□□ 0.43
ATG4B-213ENST00000460211 FOXP2O15409 715 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 ADCY3O60266 1144 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 GSPT1P15170 499 aaKnown RBP17.72■□□□□ 0.43
ATG4B-213ENST00000460211 ELNP15502 786 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 TFAP4Q01664 338 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 COG2Q14746 738 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 CLEC10AQ8IUN9 316 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 SLAIN1Q8ND83 568 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 TANGO6Q9C0B7 1094 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 ZMYM6O95789 1325 aa17.72■□□□□ 0.43
ATG4B-213ENST00000460211 TSPY2A6NKD2 308 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 RAD21O60216 631 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 FLT3LGP49771 235 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 CCNA1P78396 465 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 CTDSPL2Q05D32 466 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 SPICE1Q8N0Z3 855 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 NEDD1Q8NHV4 660 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 PAGR1Q9BTK6 254 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 GNL3Q9BVP2 549 aaKnown RBP eCLIP17.71■□□□□ 0.43
ATG4B-213ENST00000460211 TOMM22Q9NS69 142 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 CLIP2Q9UDT6 1046 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 RABGAP1Q9Y3P9 1069 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 NR2E3Q9Y5X4 410 aa17.71■□□□□ 0.43
ATG4B-213ENST00000460211 WDR46O15213 610 aaKnown RBP17.7■□□□□ 0.42
ATG4B-213ENST00000460211 TTLL1O95922 423 aa17.7■□□□□ 0.42
ATG4B-213ENST00000460211 PCP11498 1178 aaKnown RBP17.7■□□□□ 0.42
ATG4B-213ENST00000460211 FAM47AQ5JRC9 791 aa17.7■□□□□ 0.42
ATG4B-213ENST00000460211 CWC22Q9HCG8 908 aaKnown RBP17.7■□□□□ 0.42
ATG4B-213ENST00000460211 MTMR4Q9NYA4 1195 aa17.7■□□□□ 0.42
ATG4B-213ENST00000460211 RBPJLQ9UBG7 517 aa17.7■□□□□ 0.42
ATG4B-213ENST00000460211 CTNNA3Q9UI47 895 aa17.7■□□□□ 0.42
ATG4B-213ENST00000460211 SYNPO2Q9UMS6 1093 aa17.7■□□□□ 0.42
ATG4B-213ENST00000460211 MYH8P13535 1937 aa17.7■□□□□ 0.42
ATG4B-213ENST00000460211 IGKV6D-41A0A0C4DH26 115 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 ZNF213O14771 459 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 ORC4O43929 436 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 RANBP6O60518 1105 aaKnown RBP17.69■□□□□ 0.42
ATG4B-213ENST00000460211 FLOT1O75955 427 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 SGPL1O95470 568 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 TFRCP02786 760 aaKnown RBP17.69■□□□□ 0.42
ATG4B-213ENST00000460211 INHAP05111 366 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 MAPK4P31152 587 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 ERVK-9P63128 1117 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 ERVK-24P63145 666 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 LBX2Q6XYB7 198 aa17.69■□□□□ 0.42
ATG4B-213ENST00000460211 DSCC1Q9BVC3 393 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms