RNA–Protein interactions for RNA: ENST00000455013.2

C1DP3-201, Transcript of C1D nuclear receptor corepressor pseudogene 3, humanhuman

BASIC

Gene C1DP3, Length 423 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1DP3-201ENST00000455013 RNF180Q86T96 592 aa8.05□□□□□ -1.12
C1DP3-201ENST00000455013 PRPF38AQ8NAV1 312 aaKnown RBP8.05□□□□□ -1.12
C1DP3-201ENST00000455013 WHAMMQ8TF30 809 aa8.05□□□□□ -1.12
C1DP3-201ENST00000455013 HOMER2Q9NSB8 354 aa8.05□□□□□ -1.12
C1DP3-201ENST00000455013 WHRNQ9P202 907 aa8.05□□□□□ -1.12
C1DP3-201ENST00000455013 MAGEC2Q9UBF1 373 aaPredicted RBP8.05□□□□□ -1.12
C1DP3-201ENST00000455013 AP4E1Q9UPM8 1137 aa8.05□□□□□ -1.12
C1DP3-201ENST00000455013 IRS4O14654 1257 aaPredicted RBP8.04□□□□□ -1.12
C1DP3-201ENST00000455013 PDE8AO60658 829 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 LRIG2O94898 1065 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 CELA2BP08218 269 aaPredicted RBP8.04□□□□□ -1.12
C1DP3-201ENST00000455013 CNGA1P29973 690 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
C1DP3-201ENST00000455013 TTLL4Q14679 1199 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 TDRD10Q5VZ19 366 aaKnown RBP8.04□□□□□ -1.12
C1DP3-201ENST00000455013 FERMT3Q86UX7 667 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 DHX37Q8IY37 1157 aaKnown RBP8.04□□□□□ -1.12
C1DP3-201ENST00000455013 CRACR2BQ8N4Y2 399 aaPredicted RBP8.04□□□□□ -1.12
C1DP3-201ENST00000455013 MFSD2AQ8NA29 543 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 ISL2Q96A47 359 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 RCC1LQ96I51 464 aaKnown RBP8.04□□□□□ -1.12
C1DP3-201ENST00000455013 FOXQ1Q9C009 403 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 STK17AQ9UEE5 414 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 MCM8Q9UJA3 840 aa8.04□□□□□ -1.12
C1DP3-201ENST00000455013 A0A0A0MRY4 1105 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 SPDYE3A6NKU9 549 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 ALG1L2C9J202 215 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 ARHGEF15O94989 841 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 WISP1O95388 367 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 ITGAVP06756 1048 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 HOXB4P17483 251 aaPredicted RBP8.03□□□□□ -1.12
C1DP3-201ENST00000455013 AMPD1P23109 780 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 EXOSC10Q01780 885 aaKnown RBP8.03□□□□□ -1.12
C1DP3-201ENST00000455013 CBX2Q14781 532 aaPredicted RBP8.03□□□□□ -1.12
C1DP3-201ENST00000455013 FAM209AQ5JX71 171 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.03□□□□□ -1.12
C1DP3-201ENST00000455013 CCDC144CPQ8IYA2 1237 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 BAHD1Q8TBE0 780 aaPredicted RBP8.03□□□□□ -1.12
C1DP3-201ENST00000455013 PPP1R13LQ8WUF5 828 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 CEP89Q96ST8 783 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 DPH2Q9BQC3 489 aaPredicted RBP8.03□□□□□ -1.12
C1DP3-201ENST00000455013 PIDD1Q9HB75 910 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 PRR13Q9NZ81 148 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 APEX2Q9UBZ4 518 aa8.03□□□□□ -1.12
C1DP3-201ENST00000455013 A0A087WZG4 1122 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 PPM1BO75688 479 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 RAPGEF3O95398 923 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 TP53P04637 393 aaPredicted RBP8.02□□□□□ -1.13
C1DP3-201ENST00000455013 L1CAMP32004 1257 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 CDKN1CP49918 316 aaPredicted RBP8.02□□□□□ -1.13
C1DP3-201ENST00000455013 HSP90AB2PQ58FF8 381 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 NBPF12Q5TAG4 269 aaPredicted RBP8.02□□□□□ -1.13
C1DP3-201ENST00000455013 ANKRD34AQ69YU3 496 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 POMZP3Q6PJE2 187 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 ACAD11Q709F0 780 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 UBE3DQ7Z6J8 389 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 SVOPQ8N4V2 548 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 BVESQ8NE79 360 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 DNAJB8Q8NHS0 232 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 MRGPRX3Q96LB0 322 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 MRPL18Q9H0U6 180 aaKnown RBP8.02□□□□□ -1.13
C1DP3-201ENST00000455013 CHPF2Q9P2E5 772 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 LRP2BPQ9P2M1 347 aa8.02□□□□□ -1.13
C1DP3-201ENST00000455013 COL17A1Q9UMD9 1497 aaPredicted RBP8.01□□□□□ -1.13
C1DP3-201ENST00000455013 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP8.01□□□□□ -1.13
C1DP3-201ENST00000455013 SHOXO15266 292 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 PABPC1P11940 636 aaKnown RBP8.01□□□□□ -1.13
C1DP3-201ENST00000455013 CT47A1Q5JQC4 288 aaPredicted RBP8.01□□□□□ -1.13
C1DP3-201ENST00000455013 TRAPPC3LQ5T215 181 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 YOD1Q5VVQ6 348 aaPredicted RBP8.01□□□□□ -1.13
C1DP3-201ENST00000455013 ARMCX6Q7L4S7 300 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 C7orf61Q8IZ16 206 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 PPM1KQ8N3J5 372 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 AFAP1L2Q8N4X5 818 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 C2CD4AQ8NCU7 369 aaPredicted RBP8.01□□□□□ -1.13
C1DP3-201ENST00000455013 LRRN4CLQ8ND94 238 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 OSBP2Q969R2 916 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 ASPNQ9BXN1 380 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 SFMBT1Q9UHJ3 866 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 EMC9Q9Y3B6 208 aa8.01□□□□□ -1.13
C1DP3-201ENST00000455013 FAM181BA6NEQ2 426 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 NOP56O00567 594 aaKnown RBP8□□□□□ -1.13
C1DP3-201ENST00000455013 NPTXRO95502 500 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 POU3F2P20265 443 aaPredicted RBP8□□□□□ -1.13
C1DP3-201ENST00000455013 CD247P20963 164 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 C21orf62-AS1Q17RA5 79 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 ODR4Q5SWX8 454 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 DCAF15Q66K64 600 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 IGF2-ASQ6U949 168 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 NSMFQ6X4W1 530 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 LRRTM3Q86VH5 581 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 JAMLQ86YT9 394 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 TRIM59Q8IWR1 403 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 SMYD4Q8IYR2 804 aaPredicted RBP8□□□□□ -1.13
C1DP3-201ENST00000455013 VWCEQ96DN2 955 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 IER2Q9BTL4 223 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 CHMP4AQ9BY43 222 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 PCGF6Q9BYE7 350 aa8□□□□□ -1.13
C1DP3-201ENST00000455013 MKRN2Q9H000 416 aaKnown RBP8□□□□□ -1.13
C1DP3-201ENST00000455013 PCOLCE2Q9UKZ9 415 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms