RNA–Protein interactions for RNA: ENST00000454428.5

UBE2D4-209, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 288 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-209ENST00000454428 XIRP2A4UGR9 3374 aa21.03■□□□□ 0.96
UBE2D4-209ENST00000454428 CYP7A1P22680 504 aa21.03■□□□□ 0.96
UBE2D4-209ENST00000454428 TLE2Q04725 743 aa21.03■□□□□ 0.96
UBE2D4-209ENST00000454428 CERKLQ49MI3 558 aaPredicted RBP21.03■□□□□ 0.96
UBE2D4-209ENST00000454428 FAM47AQ5JRC9 791 aa21.03■□□□□ 0.96
UBE2D4-209ENST00000454428 MIGA1Q8NAN2 632 aa21.03■□□□□ 0.96
UBE2D4-209ENST00000454428 SYMPKQ92797 1274 aaKnown RBP21.03■□□□□ 0.96
UBE2D4-209ENST00000454428 TMEM265A0A087WTH1 108 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 A0A1W2PRG0 241 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 GNAI2P04899 355 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 ERCC3P19447 782 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 PLCD1P51178 756 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 EVX2Q03828 476 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 GRIN2CQ14957 1233 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 CCDC158Q5M9N0 1113 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 SPATC1LQ9H0A9 340 aa21.02■□□□□ 0.96
UBE2D4-209ENST00000454428 ZNFX1Q9P2E3 1918 aaKnown RBP21.02■□□□□ 0.95
UBE2D4-209ENST00000454428 STRNO43815 780 aa21.01■□□□□ 0.95
UBE2D4-209ENST00000454428 IGSF3O75054 1194 aa21.01■□□□□ 0.95
UBE2D4-209ENST00000454428 MYCNP04198 464 aaPredicted RBP21.01■□□□□ 0.95
UBE2D4-209ENST00000454428 KIAA1755Q5JYT7 1200 aa21.01■□□□□ 0.95
UBE2D4-209ENST00000454428 SHCBP1Q8NEM2 672 aa21.01■□□□□ 0.95
UBE2D4-209ENST00000454428 PHF24Q9UPV7 400 aa21.01■□□□□ 0.95
UBE2D4-209ENST00000454428 PARP14Q460N5 1801 aa21.01■□□□□ 0.95
UBE2D4-209ENST00000454428 REV3LO60673 3130 aa21■□□□□ 0.95
UBE2D4-209ENST00000454428 USP5P45974 858 aa21■□□□□ 0.95
UBE2D4-209ENST00000454428 POLA2Q14181 598 aa21■□□□□ 0.95
UBE2D4-209ENST00000454428 COG2Q14746 738 aa21■□□□□ 0.95
UBE2D4-209ENST00000454428 SEPT2Q15019 361 aa21■□□□□ 0.95
UBE2D4-209ENST00000454428 RNPC3Q96LT9 517 aaKnown RBP21■□□□□ 0.95
UBE2D4-209ENST00000454428 TLR7Q9NYK1 1049 aaKnown RBP21■□□□□ 0.95
UBE2D4-209ENST00000454428 DBNLQ9UJU6 430 aaKnown RBP21■□□□□ 0.95
UBE2D4-209ENST00000454428 COL9A1P20849 921 aa20.99■□□□□ 0.95
UBE2D4-209ENST00000454428 GABPAQ06546 454 aa20.99■□□□□ 0.95
UBE2D4-209ENST00000454428 TJAP1Q5JTD0 557 aa20.99■□□□□ 0.95
UBE2D4-209ENST00000454428 MAML3Q96JK9 1138 aa20.99■□□□□ 0.95
UBE2D4-209ENST00000454428 TACC3Q9Y6A5 838 aa20.99■□□□□ 0.95
UBE2D4-209ENST00000454428 NAV1Q8NEY1 1877 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 CHD7Q9P2D1 2997 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 KIAA0355O15063 1070 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 CLTBP09497 229 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 TRIM27P14373 513 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 MAGEB6Q8N7X4 407 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 CABP5Q9NP86 173 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 HOXC10Q9NYD6 342 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 RAPGEFL1Q9UHV5 662 aa20.98■□□□□ 0.95
UBE2D4-209ENST00000454428 TNFRSF10AO00220 468 aa20.97■□□□□ 0.95
UBE2D4-209ENST00000454428 IDH1O75874 414 aaKnown RBP20.97■□□□□ 0.95
UBE2D4-209ENST00000454428 TTC6Q86TZ1 520 aa20.97■□□□□ 0.95
UBE2D4-209ENST00000454428 ABRAQ8N0Z2 381 aa20.97■□□□□ 0.95
UBE2D4-209ENST00000454428 ANTXR1Q9H6X2 564 aa20.97■□□□□ 0.95
UBE2D4-209ENST00000454428 COL11A1P12107 1806 aaPredicted RBP20.97■□□□□ 0.95
UBE2D4-209ENST00000454428 DNAJB2P25686 324 aa20.96■□□□□ 0.95
UBE2D4-209ENST00000454428 RIOK1Q9BRS2 568 aaKnown RBP20.96■□□□□ 0.95
UBE2D4-209ENST00000454428 TANGO6Q9C0B7 1094 aa20.96■□□□□ 0.95
UBE2D4-209ENST00000454428 XPNPEP3Q9NQH7 507 aa20.96■□□□□ 0.95
UBE2D4-209ENST00000454428 BDP1A6H8Y1 2624 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 PLXNA1Q9UIW2 1896 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 PGK1P00558 417 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 DSG3P32926 999 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 CERS3Q8IU89 383 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 SIAH1Q8IUQ4 282 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 SSH3Q8TE77 659 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 ATG4CQ96DT6 458 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 MROH8Q9H579 483 aa20.95■□□□□ 0.94
UBE2D4-209ENST00000454428 A0A1W2PQ45 241 aaPredicted RBP20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 A0A1W2PQY0 241 aa20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 TAL1P17542 331 aaPredicted RBP20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 FPGSQ05932 587 aa20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 FAAP100Q0VG06 881 aa20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 NCAPG2Q86XI2 1143 aa20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 MB21D1Q8N884 522 aa20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 EAF2Q96CJ1 260 aaPredicted RBP20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 CCDC8Q9H0W5 538 aaPredicted RBP20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 ROBO3Q96MS0 1386 aa20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 NCOR1O75376 2440 aa20.94■□□□□ 0.94
UBE2D4-209ENST00000454428 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 PQBP1O60828 265 aaKnown RBP20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 RAG1P15918 1043 aa20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 PLS1Q14651 629 aa20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 LENG1Q96BZ8 264 aaPredicted RBP20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 ZNF576Q9H609 170 aa20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 SLC5A4Q9NY91 659 aa20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 NRBP1Q9UHY1 535 aa20.93■□□□□ 0.94
UBE2D4-209ENST00000454428 ADAMTS4O75173 837 aa20.92■□□□□ 0.94
UBE2D4-209ENST00000454428 RARBP10826 455 aa20.92■□□□□ 0.94
UBE2D4-209ENST00000454428 TMEM132BQ14DG7 1078 aa20.92■□□□□ 0.94
UBE2D4-209ENST00000454428 ANKRD33Q7Z3H0 272 aa20.92■□□□□ 0.94
UBE2D4-209ENST00000454428 CLEC10AQ8IUN9 316 aa20.92■□□□□ 0.94
UBE2D4-209ENST00000454428 TMEM39AQ9NV64 488 aa20.92■□□□□ 0.94
UBE2D4-209ENST00000454428 MPHOSPH10O00566 681 aaKnown RBP20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 SURF6O75683 361 aaKnown RBP20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 BCAR3O75815 825 aa20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 PGK2P07205 417 aa20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 ZNF865P0CJ78 1059 aaPredicted RBP20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 FCER1AP12319 257 aa20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 ATP8B2P98198 1209 aa20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 OS9Q13438 667 aaPredicted RBP20.91■□□□□ 0.94
UBE2D4-209ENST00000454428 C16orf59Q7L2K0 433 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms