RNA–Protein interactions for RNA: ENST00000441587.2

ALMS1-IT1-201, ALMS1 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene ALMS1-IT1, Length 2,107 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1-IT1-201ENST00000441587 NCAPG2Q86XI2 1143 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 CDHR1Q96JP9 859 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 HS3ST6Q96QI5 342 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 KIF2CQ99661 725 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SMAD5Q99717 465 aaKnown RBP6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 RUSC1Q9BVN2 902 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 FBXO2Q9UK22 296 aaPredicted RBP6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 SAMM50Q9Y512 469 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 PCDHB14Q9Y5E9 798 aa6.9□□□□□ -1.3
ALMS1-IT1-201ENST00000441587 DAPK1P53355 1430 aa6.9□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 TROQ12816 1431 aaPredicted RBP6.9□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 DNMT1P26358 1616 aaKnown RBP6.9□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 TRIM64CA6NLI5 447 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ITPKAP23677 461 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 TAF11Q15544 211 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 NLRP8Q86W28 1048 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 KCTD12Q96CX2 325 aaKnown RBP6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 EHMT1Q9H9B1 1298 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ITSN2Q9NZM3 1697 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 IQCA1LA6NCM1 817 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ADCY3O60266 1144 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 RPN1P04843 607 aaKnown RBP6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ZNF131P52739 623 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ITKQ08881 620 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 NNTQ13423 1086 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ARMC3Q5W041 872 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PDXDC1Q6P996 788 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 TTC30AQ86WT1 665 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 OR13H1Q8NG92 308 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ITFG2Q969R8 447 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 FAM210AQ96ND0 272 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ZIC5Q96T25 663 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 TARS2Q9BW92 718 aaKnown RBP6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 NCOA5Q9HCD5 579 aaKnown RBP6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ZNF652Q9Y2D9 606 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 GJA3Q9Y6H8 435 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PLB1Q6P1J6 1458 aa6.89□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PRG4Q92954 1404 aaPredicted RBP6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 A0A1W2PRQ8 180 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ST18O60284 1047 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 SASH3O75995 380 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 RAPGEF3O95398 923 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ATP4AP20648 1035 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 E2F5Q15329 346 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ZC3H12AQ5D1E8 599 aaKnown RBP6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CNNM4Q6P4Q7 775 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CATIPQ7Z7H3 387 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 MTMR8Q96EF0 704 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 MPHOSPH9Q99550 1183 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 TM9SF2Q99805 663 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 TMEM39AQ9NV64 488 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CFDP1Q9UEE9 299 aaPredicted RBP6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 KDM6BO15054 1643 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ABCC5O15440 1437 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ZNF644Q9H582 1327 aaPredicted RBP6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 DNAJC25-GNG10A0A024R161 153 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 FIBPO43427 364 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 GUCY2CP25092 1073 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CCNFP41002 786 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 GEMIN4P57678 1058 aaKnown RBP6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 HSP90B2PQ58FF3 399 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 DUSP27Q5VZP5 1158 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 NECAB2Q7Z6G3 386 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 LRRTM3Q86VH5 581 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 IFNL3Q8IZI9 196 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 WDR66Q8TBY9 1149 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 FRS2Q8WU20 508 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ITPKCQ96DU7 683 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 GTPBP4Q9BZE4 634 aaKnown RBP6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CDH19Q9H159 772 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PTPRHQ9HD43 1115 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ENAMQ9NRM1 1142 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 AASDHPPTQ9NRN7 309 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 SLC5A4Q9NY91 659 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 IP6K2Q9UHH9 426 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CYP8B1Q9UNU6 501 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PPP2R3BQ9Y5P8 575 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 SLC12A7Q9Y666 1083 aa6.88□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ADCY10Q96PN6 1610 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 E2F8A0AVK6 867 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PLD2O14939 933 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 LETM1O95202 739 aaPredicted RBP6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 NAT2P11245 290 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 L1CAMP32004 1257 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PIK3CAP42336 1068 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PIN1Q13526 163 aaPredicted RBP6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 MTMR1Q13613 665 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 NCAPHQ15003 741 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 SPRED3Q2MJR0 410 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 FNDC3BQ53EP0 1204 aaKnown RBP6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 VHLLQ6RSH7 139 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 PASD1Q8IV76 773 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 ZSCAN1Q8NBB4 408 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 RNF217Q8TC41 542 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CNTNAP3BQ96NU0 1288 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CNTNAP3Q9BZ76 1288 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 C22orf23Q9BZE7 217 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 EPN3Q9H201 632 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 CD248Q9HCU0 757 aa6.87□□□□□ -1.31
ALMS1-IT1-201ENST00000441587 BRD7Q9NPI1 651 aa6.87□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms