RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 RBPJLQ9UBG7 517 aa29.42■■■□□ 2.3
RAPGEF1-206ENST00000438647 RABGAP1Q9Y3P9 1069 aa29.42■■■□□ 2.3
RAPGEF1-206ENST00000438647 PRDM1O75626 825 aa29.41■■■□□ 2.3
RAPGEF1-206ENST00000438647 ERVK-9P63128 1117 aa29.41■■■□□ 2.3
RAPGEF1-206ENST00000438647 ERVK-24P63145 666 aa29.41■■■□□ 2.3
RAPGEF1-206ENST00000438647 TANGO6Q9C0B7 1094 aa29.41■■■□□ 2.3
RAPGEF1-206ENST00000438647 TXNRD2Q9NNW7 524 aa29.41■■■□□ 2.3
RAPGEF1-206ENST00000438647 WDR46O15213 610 aaKnown RBP29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 HSPD1P10809 573 aaKnown RBP29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 GRK4P32298 578 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 FLT3LGP49771 235 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 COG2Q14746 738 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 ZNF589Q86UQ0 364 aaPredicted RBP29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 CCAR1Q8IX12 1150 aaKnown RBP29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 SLAIN1Q8ND83 568 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 HOXC10Q9NYD6 342 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 NYAP2Q9P242 653 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 GABRQQ9UN88 632 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 ZMYM6O95789 1325 aa29.4■■■□□ 2.3
RAPGEF1-206ENST00000438647 MAPK4P31152 587 aa29.39■■■□□ 2.3
RAPGEF1-206ENST00000438647 IRF5Q13568 498 aa29.39■■■□□ 2.3
RAPGEF1-206ENST00000438647 TTC22Q5TAA0 569 aa29.39■■■□□ 2.3
RAPGEF1-206ENST00000438647 SH3TC2Q8TF17 1288 aa29.39■■■□□ 2.3
RAPGEF1-206ENST00000438647 ANAPC4Q9UJX5 808 aa29.39■■■□□ 2.3
RAPGEF1-206ENST00000438647 GREB1LQ9C091 1923 aaPredicted RBP29.39■■■□□ 2.3
RAPGEF1-206ENST00000438647 SPDYE16A6NNV3 312 aaPredicted RBP29.38■■■□□ 2.29
RAPGEF1-206ENST00000438647 TSPY3P0CV98 308 aa29.38■■■□□ 2.29
RAPGEF1-206ENST00000438647 TSPY8P0CW00 308 aa29.38■■■□□ 2.29
RAPGEF1-206ENST00000438647 CCNA1P78396 465 aa29.38■■■□□ 2.29
RAPGEF1-206ENST00000438647 MLLT1Q03111 559 aaPredicted RBP29.38■■■□□ 2.29
RAPGEF1-206ENST00000438647 SPICE1Q8N0Z3 855 aa29.38■■■□□ 2.29
RAPGEF1-206ENST00000438647 TMEM106CQ9BVX2 250 aa29.38■■■□□ 2.29
RAPGEF1-206ENST00000438647 FGAP02671 866 aa29.37■■■□□ 2.29
RAPGEF1-206ENST00000438647 KIAA1755Q5JYT7 1200 aa29.37■■■□□ 2.29
RAPGEF1-206ENST00000438647 CWC27Q6UX04 472 aaKnown RBP29.37■■■□□ 2.29
RAPGEF1-206ENST00000438647 PLIN4Q96Q06 1357 aa29.37■■■□□ 2.29
RAPGEF1-206ENST00000438647 IGKV6D-41A0A0C4DH26 115 aa29.36■■■□□ 2.29
RAPGEF1-206ENST00000438647 PPP4R3BQ5MIZ7 849 aa29.36■■■□□ 2.29
RAPGEF1-206ENST00000438647 NEDD1Q8NHV4 660 aa29.36■■■□□ 2.29
RAPGEF1-206ENST00000438647 PXYLP1Q8TE99 480 aa29.36■■■□□ 2.29
RAPGEF1-206ENST00000438647 SYNPO2Q9UMS6 1093 aa29.36■■■□□ 2.29
RAPGEF1-206ENST00000438647 ADCY3O60266 1144 aa29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 FLOT1O75955 427 aa29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 CTDSPL2Q05D32 466 aa29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 Q3C1V9 767 aa29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 MB21D1Q8N884 522 aa29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 CEP95Q96GE4 821 aa29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 CWC22Q9HCG8 908 aaKnown RBP29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 MTMR4Q9NYA4 1195 aa29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 BIN2Q9UBW5 565 aaPredicted RBP29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 DDX52Q9Y2R4 599 aaKnown RBP eCLIP29.35■■■□□ 2.29
RAPGEF1-206ENST00000438647 RAD21O60216 631 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 PEX10O60683 326 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 TTLL1O95922 423 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 GSPT1P15170 499 aaKnown RBP29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 UBXN2AP68543 259 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 TFAP4Q01664 338 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 POTEEQ6S8J3 1075 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 SOCS4Q8WXH5 440 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 CLIP2Q9UDT6 1046 aa29.34■■■□□ 2.29
RAPGEF1-206ENST00000438647 TSPY2A6NKD2 308 aa29.33■■■□□ 2.29
RAPGEF1-206ENST00000438647 CNMDO75829 334 aa29.33■■■□□ 2.29
RAPGEF1-206ENST00000438647 FAM47AQ5JRC9 791 aa29.33■■■□□ 2.29
RAPGEF1-206ENST00000438647 DOCK3Q8IZD9 2030 aa29.32■■■□□ 2.28
RAPGEF1-206ENST00000438647 DSG3P32926 999 aa29.32■■■□□ 2.28
RAPGEF1-206ENST00000438647 MKL1Q969V6 931 aa29.32■■■□□ 2.28
RAPGEF1-206ENST00000438647 NUDT12Q9BQG2 462 aa29.32■■■□□ 2.28
RAPGEF1-206ENST00000438647 PORCNQ9H237 461 aa29.32■■■□□ 2.28
RAPGEF1-206ENST00000438647 BTBD7Q9P203 1132 aa29.32■■■□□ 2.28
RAPGEF1-206ENST00000438647 GJD2Q9UKL4 321 aa29.32■■■□□ 2.28
RAPGEF1-206ENST00000438647 KIAA0100Q14667 2235 aaKnown RBP29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 F5H6K3 240 aa29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 ORC4O43929 436 aa29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 KLRC3Q07444 240 aa29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 CENPQQ7L2Z9 268 aaPredicted RBP29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 GPR142Q7Z601 462 aa29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 PLEKHH3Q7Z736 793 aa29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 BRCA2P51587 3418 aa29.31■■■□□ 2.28
RAPGEF1-206ENST00000438647 POTEFA5A3E0 1075 aa29.3■■■□□ 2.28
RAPGEF1-206ENST00000438647 MYCP01106 439 aaPredicted RBP29.3■■■□□ 2.28
RAPGEF1-206ENST00000438647 FGRP09769 529 aa29.3■■■□□ 2.28
RAPGEF1-206ENST00000438647 PCP11498 1178 aaKnown RBP29.3■■■□□ 2.28
RAPGEF1-206ENST00000438647 RANBP6O60518 1105 aaKnown RBP29.29■■■□□ 2.28
RAPGEF1-206ENST00000438647 FAM83BQ5T0W9 1011 aa29.29■■■□□ 2.28
RAPGEF1-206ENST00000438647 TOMM22Q9NS69 142 aa29.29■■■□□ 2.28
RAPGEF1-206ENST00000438647 RBBP6Q7Z6E9 1792 aaKnown RBP29.29■■■□□ 2.28
RAPGEF1-206ENST00000438647 NDUFB10O96000 172 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 ELNP15502 786 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 WDR78Q5VTH9 848 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 GMCL1P1Q8NEA9 526 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 RUFY2Q8WXA3 655 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 ATG4CQ96DT6 458 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 DSCC1Q9BVC3 393 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 SPATC1LQ9H0A9 340 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 RNF41Q9H4P4 317 aaPredicted RBP29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 IVNS1ABPQ9Y6Y0 642 aa29.28■■■□□ 2.28
RAPGEF1-206ENST00000438647 RAD50Q92878 1312 aa29.27■■■□□ 2.28
RAPGEF1-206ENST00000438647 HAND2P61296 217 aa29.27■■■□□ 2.28
RAPGEF1-206ENST00000438647 SAMD1Q6SPF0 538 aaPredicted RBP29.27■■■□□ 2.28
RAPGEF1-206ENST00000438647 INCENPQ9NQS7 918 aa29.27■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms