RNA–Protein interactions for RNA: ENST00000434425.5

RFC3-202, Transcript of replication factor C subunit 3, humanhuman

TSL 5 BASIC

Gene RFC3, Length 1,461 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-202ENST00000434425 GINM1Q9NU53 330 aa6.47□□□□□ -1.37
RFC3-202ENST00000434425 PIM2Q9P1W9 311 aa6.47□□□□□ -1.37
RFC3-202ENST00000434425 MAP10Q9P2G4 905 aa6.47□□□□□ -1.37
RFC3-202ENST00000434425 HCSTQ9UBK5 93 aa6.47□□□□□ -1.37
RFC3-202ENST00000434425 POLKQ9UBT6 870 aa6.47□□□□□ -1.37
RFC3-202ENST00000434425 GTF2A1LQ9UNN4 478 aa6.47□□□□□ -1.37
RFC3-202ENST00000434425 KCPQ6ZWJ8 1503 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 NPC1L1Q9UHC9 1359 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 CCDC88AQ3V6T2 1871 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 C4AP0C0L4 1744 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 IQCA1LA6NCM1 817 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 ERVV-2B6SEH9 535 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 F12P00748 615 aaPredicted RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 HOXD10P28358 340 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 MAPK1P28482 360 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 CHRNA5P30532 468 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 ZNF76P36508 570 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 CDKN1CP49918 316 aaPredicted RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 NFX1Q12986 1120 aaKnown RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 RASA3Q14644 834 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 DALRD3Q5D0E6 543 aaKnown RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 MFSD4BQ5TF39 518 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 ALKBH2Q6NS38 261 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 KIAA0907Q7Z7F0 614 aaPredicted RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 CLASRPQ8N2M8 674 aaKnown RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 STAG2Q8N3U4 1231 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 ANKK1Q8NFD2 765 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 SMCR8Q8TEV9 937 aaPredicted RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 TAF4BQ92750 862 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 DCAF5Q96JK2 942 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 NELL2Q99435 816 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 CHCHD3Q9NX63 227 aaKnown RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 RNF181Q9P0P0 153 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 CNTN3Q9P232 1028 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 SRP68Q9UHB9 627 aaKnown RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 DCTN4Q9UJW0 460 aa6.46□□□□□ -1.38
RFC3-202ENST00000434425 NOVA2Q9UNW9 492 aaKnown RBP6.46□□□□□ -1.38
RFC3-202ENST00000434425 KDRP35968 1356 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 GOLGA6L3A6NEY3 463 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 ERICH4A6NGS2 130 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 PTCD1O75127 700 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 FBXO45P0C2W1 286 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 ENPP1P22413 925 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 MASP1P48740 699 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 PRELPP51888 382 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 DDR1Q08345 913 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 EIF4A2Q14240 407 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 AMOTQ4VCS5 1084 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 ZCCHC8Q6NZY4 707 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 TBC1D9Q6ZT07 1266 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 RGL4Q8IZJ4 473 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 TNS4Q8IZW8 715 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 ATXN2LQ8WWM7 1075 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 BHMTQ93088 406 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 TRMT2BQ96GJ1 504 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 GPR101Q96P66 508 aaPredicted RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 SELENOOQ9BVL4 669 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 WBP1LQ9NX94 342 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 TSR3Q9UJK0 312 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 DDX41Q9UJV9 622 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 CDV3Q9UKY7 258 aaKnown RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 RABL2BQ9UNT1 228 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 PCDHB3Q9Y5E6 796 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 COL5A3P25940 1745 aaPredicted RBP6.45□□□□□ -1.38
RFC3-202ENST00000434425 IL16Q14005 1332 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 KDM2BQ8NHM5 1336 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 CNTNAP4Q9C0A0 1308 aa6.45□□□□□ -1.38
RFC3-202ENST00000434425 GOLGA8CPA6NN73 597 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 FAM25EA8MYX2 175 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 PIK3CDO00329 1044 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 CDC45O75419 566 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 FMNL1O95466 1100 aaPredicted RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 OAS2P29728 719 aaKnown RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 TM4SF1P30408 202 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 STIP1P31948 543 aaKnown RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 CRKLP46109 303 aaKnown RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 CABP4P57796 275 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 TRIM29Q14134 588 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 LRRC41Q15345 812 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 TTF1Q15361 905 aaPredicted RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 ECM1Q16610 540 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 PARP10Q53GL7 1025 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 PPP4R3AQ6IN85 833 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 CFAP161Q6P656 301 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 DAAM2Q86T65 1068 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 ZSCAN29Q8IWY8 852 aaPredicted RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 MICALL1Q8N3F8 863 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 FAM160A2Q8N612 972 aaPredicted RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 TEX9Q8N6V9 391 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 NFATC2IPQ8NCF5 419 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 RPGRQ92834 1020 aaKnown RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 WNT2BQ93097 391 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 CDK5RAP3Q96JB5 506 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 LZTS2Q9BRK4 669 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 PRDM9Q9NQV7 894 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 SH3GLB2Q9NR46 395 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.44□□□□□ -1.38
RFC3-202ENST00000434425 ZNF831Q5JPB2 1677 aa6.44□□□□□ -1.38
RFC3-202ENST00000434425 POLRMTO00411 1230 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms