RNA–Protein interactions for RNA: ENST00000422933.5

HDLBP-209, Transcript of high density lipoprotein binding protein, humanhuman

TSL 3

Gene HDLBP, Length 929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-209ENST00000422933 LPAR1Q92633 364 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 MKL1Q969V6 931 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 CHMP4CQ96CF2 233 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 CAPNS2Q96L46 248 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 KIAA1683Q9H0B3 1180 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 TSKSQ9UJT2 592 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 TMX2Q9Y320 296 aa11.69□□□□□ -0.54
HDLBP-209ENST00000422933 CCL15-CCL14A0A0B4J2E2 113 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 IGKV6D-41A0A0C4DH26 115 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 ST18O60284 1047 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CALM1P0DP23 149 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CALM2P0DP24 149 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CALM3P0DP25 149 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 MAP2K2P36507 400 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 LIFRP42702 1097 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 MKRN3Q13064 507 aaKnown RBP11.68□□□□□ -0.54
HDLBP-209ENST00000422933 MTMR2Q13614 643 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 RABEP1Q15276 862 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 ZYXQ15942 572 aaKnown RBP11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CCL15Q16663 113 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 ADCK5Q3MIX3 580 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CYP4F22Q6NT55 531 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CYB5R4Q7L1T6 521 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CHST3Q7LGC8 479 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 PROCA1Q8NCQ7 364 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-209ENST00000422933 BEGAINQ9BUH8 593 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 ZSWIM6Q9HCJ5 1215 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 PDRG1Q9NUG6 133 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 PNMA3Q9UL41 463 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 NAP1L2Q9ULW6 460 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-209ENST00000422933 KCNH4Q9UQ05 1017 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 CTDP1Q9Y5B0 961 aaPredicted RBP11.68□□□□□ -0.54
HDLBP-209ENST00000422933 SLC12A7Q9Y666 1083 aa11.68□□□□□ -0.54
HDLBP-209ENST00000422933 ALDH1A1P00352 501 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 OSBPP22059 807 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 KIF5BP33176 963 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 GUCY1A2P33402 732 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 NEK4P51957 841 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 HMGCS2P54868 508 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 IKQ13123 557 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-209ENST00000422933 SH3D19Q5HYK7 790 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 SLFN13Q68D06 897 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 ENAHQ8N8S7 591 aaPredicted RBP11.67□□□□□ -0.54
HDLBP-209ENST00000422933 PNMA1Q8ND90 353 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 GMCL1P1Q8NEA9 526 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 ANKS1AQ92625 1134 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 TBC1D32Q96NH3 1257 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 TMEM47Q9BQJ4 181 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 VCPKMTQ9H867 229 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 IL17RBQ9NRM6 502 aa11.67□□□□□ -0.54
HDLBP-209ENST00000422933 GREB1LQ9C091 1923 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 PHIPQ8WWQ0 1821 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 A0A0G2JLL6 359 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 F5H6K3 240 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 WDR46O15213 610 aaKnown RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 NMT2O60551 498 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 AOC2O75106 756 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 SLC1A4P43007 532 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 IRX3P78415 501 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 JAG1P78504 1218 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 EXOSC10Q01780 885 aaKnown RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 KLRC3Q07444 240 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 CCDC96Q2M329 555 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 RCSD1Q6JBY9 416 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 Q6ZUG5 572 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 PRRT2Q7Z6L0 340 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 CCDC84Q86UT8 332 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 LRRC47Q8N1G4 583 aaKnown RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 CTCFLQ8NI51 663 aaPredicted RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 ACER1Q8TDN7 264 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 DCAF4Q8WV16 495 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 CNKSR2Q8WXI2 1034 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 UPF3BQ9BZI7 483 aaKnown RBP11.66□□□□□ -0.54
HDLBP-209ENST00000422933 MTMR7Q9Y216 660 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 TACC3Q9Y6A5 838 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 TAF6LQ9Y6J9 622 aa11.66□□□□□ -0.54
HDLBP-209ENST00000422933 CCDC196A0A1B0GTZ2 297 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L15C9J2P7 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L13C9JLJ4 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L11C9JVI0 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L18D6R9N7 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L22D6RA61 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L17D6RBQ6 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L19D6RCP7 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L20D6RJB6 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 SH2B2O14492 632 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-209ENST00000422933 DDAH1O94760 285 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 BMP3P12645 472 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 MCM2P49736 904 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 GNAQP50148 359 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 KIF23Q02241 960 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-209ENST00000422933 USP17L24Q0WX57 530 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 PPP2R5BQ15173 497 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 SHROOM1Q2M3G4 852 aaPredicted RBP11.65□□□□□ -0.54
HDLBP-209ENST00000422933 GPATCH4Q5T3I0 446 aaKnown RBP11.65□□□□□ -0.54
HDLBP-209ENST00000422933 ANKRD23Q86SG2 305 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 IGDCC4Q8TDY8 1250 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 CHURC1Q8WUH1 139 aa11.65□□□□□ -0.54
HDLBP-209ENST00000422933 NUP133Q8WUM0 1156 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 107.5 ms