RNA–Protein interactions for RNA: ENST00000419387.5

NUP50-205, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 1,018 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-205ENST00000419387 H0YGN5 161 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 CDK8P49336 464 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 CCNA1P78396 465 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 TRIM32Q13049 653 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 MORN1Q5T089 497 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 LBX2Q6XYB7 198 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 TMEM179Q6ZVK1 233 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 AMOTL1Q8IY63 956 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 TRMT44Q8IYL2 757 aaKnown RBP11.35□□□□□ -0.59
NUP50-205ENST00000419387 TRIB2Q92519 343 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 USP6NLQ92738 828 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 GPATCH3Q96I76 525 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 CCDC17Q96LX7 622 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 RPAP3Q9H6T3 665 aaPredicted RBP11.35□□□□□ -0.59
NUP50-205ENST00000419387 CWC22Q9HCG8 908 aaKnown RBP11.35□□□□□ -0.59
NUP50-205ENST00000419387 PLSCR2Q9NRY7 297 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 NAV1Q8NEY1 1877 aa11.35□□□□□ -0.59
NUP50-205ENST00000419387 GLRX3O76003 335 aaKnown RBP11.34□□□□□ -0.59
NUP50-205ENST00000419387 AKR1B1P15121 316 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 RGS2P41220 211 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 COG2Q14746 738 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 CTR9Q6PD62 1173 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 C16orf86Q6ZW13 317 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 SIAH1Q8IUQ4 282 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 KBTBD3Q8NAB2 608 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 HOXC10Q9NYD6 342 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 BTBD7Q9P203 1132 aa11.34□□□□□ -0.59
NUP50-205ENST00000419387 COLQQ9Y215 455 aaPredicted RBP11.34□□□□□ -0.59
NUP50-205ENST00000419387 PLXNB2O15031 1838 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 SPDYE16A6NNV3 312 aaPredicted RBP11.33□□□□□ -0.6
NUP50-205ENST00000419387 POTEB2H3BUK9 544 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 SMIM22K7EJ46 135 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 MAP2K5Q13163 448 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 MAP3K21Q5TCX8 1036 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 ANKLE1Q8NAG6 615 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 PAWRQ96IZ0 340 aaKnown RBP11.33□□□□□ -0.6
NUP50-205ENST00000419387 STRBPQ96SI9 672 aaKnown RBP11.33□□□□□ -0.6
NUP50-205ENST00000419387 ARHGEF10LQ9HCE6 1279 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 TMX2Q9Y320 296 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 NR2E3Q9Y5X4 410 aa11.33□□□□□ -0.6
NUP50-205ENST00000419387 SLC15A5A6NIM6 579 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 RNF113AO15541 343 aaKnown RBP11.32□□□□□ -0.6
NUP50-205ENST00000419387 ZFYP08048 801 aaPredicted RBP11.32□□□□□ -0.6
NUP50-205ENST00000419387 ZKSCAN1P17029 563 aaPredicted RBP11.32□□□□□ -0.6
NUP50-205ENST00000419387 PTPREP23469 700 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 ICA1Q05084 483 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 CACNB2Q08289 660 aaPredicted RBP11.32□□□□□ -0.6
NUP50-205ENST00000419387 CCL14Q16627 93 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 KIAA1755Q5JYT7 1200 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 WDR78Q5VTH9 848 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 TSHZ3Q63HK5 1081 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 GIMAP6Q6P9H5 292 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 NECAB2Q7Z6G3 386 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 APPBP2Q92624 585 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 LPAR1Q92633 364 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 OSBP2Q969R2 916 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 APBA2Q99767 749 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 TANGO6Q9C0B7 1094 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 SH2D4AQ9H788 454 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 ARPP21Q9UBL0 812 aaPredicted RBP11.32□□□□□ -0.6
NUP50-205ENST00000419387 TTC41PQ6P2S7 1318 aa11.32□□□□□ -0.6
NUP50-205ENST00000419387 GSG1L2A8MUP6 293 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 ERC2O15083 957 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 EVI5O60447 810 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 RRP1P56182 461 aaKnown RBP11.31□□□□□ -0.6
NUP50-205ENST00000419387 LRRFIP1Q32MZ4 808 aaKnown RBP11.31□□□□□ -0.6
NUP50-205ENST00000419387 SBK1Q52WX2 424 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 CLEC10AQ8IUN9 316 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 MB21D1Q8N884 522 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 DIS3LQ8TF46 1054 aaKnown RBP11.31□□□□□ -0.6
NUP50-205ENST00000419387 VCPKMTQ9H867 229 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 KANSL2Q9H9L4 492 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 PCDH10Q9P2E7 1040 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 OGDHLQ9ULD0 1010 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 IVNS1ABPQ9Y6Y0 642 aa11.31□□□□□ -0.6
NUP50-205ENST00000419387 BAZ2AQ9UIF9 1905 aaKnown RBP11.31□□□□□ -0.6
NUP50-205ENST00000419387 WDR46O15213 610 aaKnown RBP11.3□□□□□ -0.6
NUP50-205ENST00000419387 STRNO43815 780 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 FLOT1O75955 427 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 HOXC6P09630 235 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 EEF2P13639 858 aaKnown RBP11.3□□□□□ -0.6
NUP50-205ENST00000419387 GNAT2P19087 354 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 ATP2B2Q01814 1243 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 GRB14Q14449 540 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 MFSD14CQ5VZR4 134 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 SPICE1Q8N0Z3 855 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 MOV10L1Q9BXT6 1211 aaKnown RBP11.3□□□□□ -0.6
NUP50-205ENST00000419387 NBPF3Q9H094 633 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 SPATC1LQ9H0A9 340 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 MYH7P12883 1935 aa11.3□□□□□ -0.6
NUP50-205ENST00000419387 MINDY4BA8MYZ0 360 aa11.29□□□□□ -0.6
NUP50-205ENST00000419387 PATL2C9JE40 543 aaKnown RBP11.29□□□□□ -0.6
NUP50-205ENST00000419387 GPAA1O43292 621 aa11.29□□□□□ -0.6
NUP50-205ENST00000419387 CCND3P30281 292 aaPredicted RBP11.29□□□□□ -0.6
NUP50-205ENST00000419387 FXR1P51114 621 aaKnown RBP eCLIP11.29□□□□□ -0.6
NUP50-205ENST00000419387 SHCBP1Q8NEM2 672 aa11.29□□□□□ -0.6
NUP50-205ENST00000419387 NPLOC4Q8TAT6 608 aa11.29□□□□□ -0.6
NUP50-205ENST00000419387 PI4K2BQ8TCG2 481 aa11.29□□□□□ -0.6
NUP50-205ENST00000419387 ATG4CQ96DT6 458 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms