RNA–Protein interactions for RNA: ENST00000409031.5

SMPD4-202, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMPD4, Length 4,896 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-202ENST00000409031 SUN1O94901 812 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 NBPF9Q3BBW0 867 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 MAGEB6Q8N7X4 407 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 METTL22Q9BUU2 404 aaPredicted RBP19.58■□□□□ 0.72
SMPD4-202ENST00000409031 CSRNP2Q9H175 543 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 LARSQ9P2J5 1176 aaKnown RBP19.58■□□□□ 0.72
SMPD4-202ENST00000409031 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.58■□□□□ 0.72
SMPD4-202ENST00000409031 PTCH1Q13635 1447 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 SOWAHDA6NJG2 315 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 ATP1A3P13637 1013 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 EHMT1Q9H9B1 1298 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 PSD3Q9NYI0 1048 aa19.58■□□□□ 0.72
SMPD4-202ENST00000409031 MAGEB6P1A0A0J9YX57 407 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 SPOPO43791 374 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 TNFAIP3P21580 790 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 SLF2Q8IX21 1173 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 BPIFA3Q9BQP9 254 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 EDC3Q96F86 508 aaKnown RBP19.57■□□□□ 0.72
SMPD4-202ENST00000409031 ST7Q9NRC1 585 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 NR1D1P20393 614 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 DDIT3P35638 169 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 HIBCHQ6NVY1 386 aaPredicted RBP19.57■□□□□ 0.72
SMPD4-202ENST00000409031 TRIM66O15016 1216 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 HHATQ5VTY9 493 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 CCHCR1Q8TD31 782 aa19.57■□□□□ 0.72
SMPD4-202ENST00000409031 KCNK3O14649 394 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 MBD4O95243 580 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 RASIP1Q5U651 963 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 KRIT1O00522 736 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 GTPBP6O43824 516 aaPredicted RBP19.56■□□□□ 0.72
SMPD4-202ENST00000409031 FERP16591 822 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 RETREG2Q8NC44 543 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 FTOQ9C0B1 505 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMPD4-202ENST00000409031 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.56■□□□□ 0.72
SMPD4-202ENST00000409031 DCAF17Q5H9S7 520 aaPredicted RBP19.56■□□□□ 0.72
SMPD4-202ENST00000409031 ANKRD20A3Q5VUR7 823 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 TSNARE1Q96NA8 513 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 MBD5Q9P267 1494 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 CARMIL3Q8ND23 1372 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 CD109Q6YHK3 1445 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 NECTIN1Q15223 517 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 MYL10Q9BUA6 226 aa19.56■□□□□ 0.72
SMPD4-202ENST00000409031 ACRBPQ8NEB7 543 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 SAAL1Q96ER3 474 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 PGBD1Q96JS3 809 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 HINFPQ9BQA5 517 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 ASIC3Q9UHC3 531 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 NDUFB9Q9Y6M9 179 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 PLXNC1O60486 1568 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 EEF2P13639 858 aaKnown RBP19.55■□□□□ 0.72
SMPD4-202ENST00000409031 ADD1P35611 737 aaKnown RBP19.55■□□□□ 0.72
SMPD4-202ENST00000409031 INTS9Q9NV88 658 aaKnown RBP19.55■□□□□ 0.72
SMPD4-202ENST00000409031 ZMYM6O95789 1325 aa19.55■□□□□ 0.72
SMPD4-202ENST00000409031 HMGB1P1B2RPK0 211 aaPredicted RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 HEXIM1O94992 359 aaKnown RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 HSPD1P10809 573 aaKnown RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 EPB41P11171 864 aaKnown RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 LETM2Q2VYF4 491 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 CRACR2BQ8N4Y2 399 aaPredicted RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 RRP36Q96EU6 259 aaKnown RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 PHF23Q9BUL5 403 aaPredicted RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 MAST1Q9Y2H9 1570 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 EPB41L5Q9HCM4 733 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 AMFRQ9UKV5 643 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 RAB3IL1Q8TBN0 382 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 CXorf56Q9H5V9 222 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 CNOT10Q9H9A5 744 aaKnown RBP19.54■□□□□ 0.72
SMPD4-202ENST00000409031 NLRC4Q9NPP4 1024 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 ANKRD42Q8N9B4 389 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 KLHL29Q96CT2 875 aa19.54■□□□□ 0.72
SMPD4-202ENST00000409031 ARHGEF25Q86VW2 580 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 CCDC105Q8IYK2 499 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 CYP21A2P08686 494 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 NCAPH2Q6IBW4 605 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 MGARPQ8TDB4 240 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 WHAMMQ8TF30 809 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 YTHDC2Q9H6S0 1430 aaKnown RBP19.53■□□□□ 0.72
SMPD4-202ENST00000409031 NCOA3Q9Y6Q9 1424 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 GCKRQ14397 625 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 FERMT1Q9BQL6 677 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 VCX3AQ9NNX9 186 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 ANAPC4Q9UJX5 808 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 MRFAP1Q9Y605 127 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 FAM114A2Q9NRY5 505 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 KDM6BO15054 1643 aa19.53■□□□□ 0.72
SMPD4-202ENST00000409031 BTBD18B2RXH4 712 aa19.52■□□□□ 0.72
SMPD4-202ENST00000409031 RNMTO43148 476 aaKnown RBP19.52■□□□□ 0.72
SMPD4-202ENST00000409031 NDUFA10O95299 355 aa19.52■□□□□ 0.72
SMPD4-202ENST00000409031 EEF1GP26641 437 aaKnown RBP19.52■□□□□ 0.72
SMPD4-202ENST00000409031 HAUS7Q99871 368 aa19.52■□□□□ 0.72
SMPD4-202ENST00000409031 TROVE2P10155 538 aaKnown RBP eCLIP19.52■□□□□ 0.72
SMPD4-202ENST00000409031 NOP53Q9NZM5 478 aaKnown RBP19.52■□□□□ 0.72
SMPD4-202ENST00000409031 TPX2Q9ULW0 747 aaKnown RBP19.52■□□□□ 0.72
SMPD4-202ENST00000409031 PTPN21Q16825 1174 aa19.52■□□□□ 0.72
SMPD4-202ENST00000409031 CFAP57Q96MR6 1250 aa19.52■□□□□ 0.72
SMPD4-202ENST00000409031 MAN1B1Q9UKM7 699 aa19.52■□□□□ 0.72
SMPD4-202ENST00000409031 MIGA1Q8NAN2 632 aa19.52■□□□□ 0.71
SMPD4-202ENST00000409031 KRT12Q99456 494 aa19.52■□□□□ 0.71
SMPD4-202ENST00000409031 BUB1O43683 1085 aa19.51■□□□□ 0.71
SMPD4-202ENST00000409031 CTNND1O60716 968 aaKnown RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms