RNA–Protein interactions for RNA: ENST00000402259.5

HDAC11-202, Transcript of histone deacetylase 11, humanhuman

TSL 3 BASIC

Gene HDAC11, Length 1,000 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC11-202ENST00000402259 DGKHQ86XP1 1220 aa20.5■□□□□ 0.87
HDAC11-202ENST00000402259 MB21D2Q8IYB1 491 aaPredicted RBP20.5■□□□□ 0.87
HDAC11-202ENST00000402259 NKX2-3Q8TAU0 364 aa20.5■□□□□ 0.87
HDAC11-202ENST00000402259 ANKS1AQ92625 1134 aa20.5■□□□□ 0.87
HDAC11-202ENST00000402259 MTA3Q9BTC8 594 aa20.5■□□□□ 0.87
HDAC11-202ENST00000402259 GOPCQ9HD26 462 aa20.5■□□□□ 0.87
HDAC11-202ENST00000402259 NMT2O60551 498 aa20.49■□□□□ 0.87
HDAC11-202ENST00000402259 GMCL1P1Q8NEA9 526 aa20.49■□□□□ 0.87
HDAC11-202ENST00000402259 RNF186Q9NXI6 227 aa20.49■□□□□ 0.87
HDAC11-202ENST00000402259 STX8Q9UNK0 236 aa20.49■□□□□ 0.87
HDAC11-202ENST00000402259 PDHXO00330 501 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 TOP1P11387 765 aaKnown RBP20.48■□□□□ 0.87
HDAC11-202ENST00000402259 VCAM1P19320 739 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 ZYXQ15942 572 aaKnown RBP20.48■□□□□ 0.87
HDAC11-202ENST00000402259 TREML2Q5T2D2 321 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 RCSD1Q6JBY9 416 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 CYB5R4Q7L1T6 521 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 RASEFQ8IZ41 740 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 ZSCAN10Q96SZ4 725 aaPredicted RBP20.48■□□□□ 0.87
HDAC11-202ENST00000402259 UBAC1Q9BSL1 405 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 PNMA3Q9UL41 463 aa20.48■□□□□ 0.87
HDAC11-202ENST00000402259 WDR46O15213 610 aaKnown RBP20.47■□□□□ 0.87
HDAC11-202ENST00000402259 DGKZQ13574 1117 aa20.47■□□□□ 0.87
HDAC11-202ENST00000402259 SNX14Q9Y5W7 946 aa20.47■□□□□ 0.87
HDAC11-202ENST00000402259 WDR19Q8NEZ3 1342 aa20.47■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L15C9J2P7 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L13C9JLJ4 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L11C9JVI0 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L18D6R9N7 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L22D6RA61 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L17D6RBQ6 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L19D6RCP7 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L20D6RJB6 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 F5H6K3 240 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 HMGB1P09429 215 aaKnown RBP20.46■□□□□ 0.87
HDAC11-202ENST00000402259 MCM5P33992 734 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 KLRC3Q07444 240 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 USP17L24Q0WX57 530 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 SART3Q15020 963 aaKnown RBP20.46■□□□□ 0.87
HDAC11-202ENST00000402259 TAF1CQ15572 869 aaPredicted RBP20.46■□□□□ 0.87
HDAC11-202ENST00000402259 NOM1Q5C9Z4 860 aaKnown RBP20.46■□□□□ 0.87
HDAC11-202ENST00000402259 ENAHQ8N8S7 591 aaPredicted RBP20.46■□□□□ 0.87
HDAC11-202ENST00000402259 NEK1Q96PY6 1258 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 PARK7Q99497 189 aaKnown RBP20.46■□□□□ 0.87
HDAC11-202ENST00000402259 TMEM47Q9BQJ4 181 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 ZFYVE28Q9HCC9 887 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 TNKSO95271 1327 aa20.46■□□□□ 0.87
HDAC11-202ENST00000402259 TRPA1O75762 1119 aa20.45■□□□□ 0.86
HDAC11-202ENST00000402259 NDUFB10O96000 172 aa20.45■□□□□ 0.86
HDAC11-202ENST00000402259 OSBPP22059 807 aa20.45■□□□□ 0.86
HDAC11-202ENST00000402259 SEC23AQ15436 765 aa20.45■□□□□ 0.86
HDAC11-202ENST00000402259 KIAA1755Q5JYT7 1200 aa20.45■□□□□ 0.86
HDAC11-202ENST00000402259 LRRC47Q8N1G4 583 aaKnown RBP20.45■□□□□ 0.86
HDAC11-202ENST00000402259 ZKSCAN3Q9BRR0 538 aa20.45■□□□□ 0.86
HDAC11-202ENST00000402259 ERICH2A1L162 156 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 SEC24BO95487 1268 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 HSPA1AP0DMV8 641 aaKnown RBP20.44■□□□□ 0.86
HDAC11-202ENST00000402259 HSPA1BP0DMV9 641 aaKnown RBP20.44■□□□□ 0.86
HDAC11-202ENST00000402259 ANTXR2P58335 489 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 ANAPC15P60006 121 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 CATSPERGQ6ZRH7 1159 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 IL17RAQ96F46 866 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 GMCL1Q96IK5 515 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 TMEM87BQ96K49 555 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 RPAP3Q9H6T3 665 aaPredicted RBP20.44■□□□□ 0.86
HDAC11-202ENST00000402259 ADGRA2Q96PE1 1338 aa20.44■□□□□ 0.86
HDAC11-202ENST00000402259 PARP14Q460N5 1801 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 IFIT3O14879 490 aaKnown RBP20.43■□□□□ 0.86
HDAC11-202ENST00000402259 PRC1O43663 620 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 PSMA5P28066 241 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 IRX3P78415 501 aaPredicted RBP20.43■□□□□ 0.86
HDAC11-202ENST00000402259 CRHR2Q13324 411 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 ADCK5Q3MIX3 580 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 SLFN13Q68D06 897 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 GTF3C2Q8WUA4 911 aaPredicted RBP20.43■□□□□ 0.86
HDAC11-202ENST00000402259 ASCC2Q9H1I8 757 aaPredicted RBP20.43■□□□□ 0.86
HDAC11-202ENST00000402259 MYPNQ86TC9 1320 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 RLFQ13129 1914 aa20.43■□□□□ 0.86
HDAC11-202ENST00000402259 TLR2O60603 784 aa20.42■□□□□ 0.86
HDAC11-202ENST00000402259 IFIT1BQ5T764 474 aaKnown RBP20.42■□□□□ 0.86
HDAC11-202ENST00000402259 LBX2Q6XYB7 198 aa20.42■□□□□ 0.86
HDAC11-202ENST00000402259 DHX32Q7L7V1 743 aaKnown RBP20.42■□□□□ 0.86
HDAC11-202ENST00000402259 SPICE1Q8N0Z3 855 aa20.42■□□□□ 0.86
HDAC11-202ENST00000402259 IGDCC4Q8TDY8 1250 aa20.42■□□□□ 0.86
HDAC11-202ENST00000402259 TM6SF1Q9BZW5 370 aa20.42■□□□□ 0.86
HDAC11-202ENST00000402259 KAT14Q9H8E8 782 aa20.42■□□□□ 0.86
HDAC11-202ENST00000402259 GCLCP48506 637 aaPredicted RBP20.41■□□□□ 0.86
HDAC11-202ENST00000402259 EXOSC10Q01780 885 aaKnown RBP20.41■□□□□ 0.86
HDAC11-202ENST00000402259 WTAPQ15007 396 aa20.41■□□□□ 0.86
HDAC11-202ENST00000402259 TMEM67Q5HYA8 995 aa20.41■□□□□ 0.86
HDAC11-202ENST00000402259 TMTC2Q8N394 836 aa20.41■□□□□ 0.86
HDAC11-202ENST00000402259 PNMA1Q8ND90 353 aa20.41■□□□□ 0.86
HDAC11-202ENST00000402259 DCAF4Q8WV16 495 aa20.41■□□□□ 0.86
HDAC11-202ENST00000402259 JAKMIP1Q96N16 626 aaKnown RBP20.41■□□□□ 0.86
HDAC11-202ENST00000402259 FOXN1O15353 648 aa20.4■□□□□ 0.86
HDAC11-202ENST00000402259 RAD21O60216 631 aa20.4■□□□□ 0.86
HDAC11-202ENST00000402259 PLA2G6O60733 806 aa20.4■□□□□ 0.86
HDAC11-202ENST00000402259 TBC1D8O95759 1140 aa20.4■□□□□ 0.86
HDAC11-202ENST00000402259 SNHG28P0DPA3 235 aa20.4■□□□□ 0.86
HDAC11-202ENST00000402259 CYP2C8P10632 490 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms