RNA–Protein interactions for RNA: ENST00000399355.6

ITSN1-211, Transcript of intersectin 1, humanhuman

TSL 1 (best) BASIC

Gene ITSN1, Length 4,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-211ENST00000399355 CCNL1Q9UK58 526 aaPredicted RBP13.39□□□□□ -0.27
ITSN1-211ENST00000399355 TRIM75PA6NK02 468 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 CUTAO60888 179 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 USP5P45974 858 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 FXR1P51114 621 aaKnown RBP eCLIP13.39□□□□□ -0.27
ITSN1-211ENST00000399355 GNG11P61952 73 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 GLIPR1L2Q4G1C9 344 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 CATIPQ7Z7H3 387 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 TC2NQ8N9U0 490 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 PAGE5Q96GU1 130 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 CCDC34Q96HJ3 373 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 KCNQ5Q9NR82 932 aa13.39□□□□□ -0.27
ITSN1-211ENST00000399355 COL16A1Q07092 1604 aaPredicted RBP13.38□□□□□ -0.27
ITSN1-211ENST00000399355 PPP6R2O75170 966 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 PLEKHG2Q9H7P9 1386 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 ATRNO75882 1429 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 SNAP25P60880 206 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 RBL2Q08999 1139 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 ARHGAP29Q52LW3 1261 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 TRIM65Q6PJ69 517 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 RAD9BQ6WBX8 426 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 TMEM260Q9NX78 707 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 ZNF512BQ96KM6 892 aaPredicted RBP13.38□□□□□ -0.27
ITSN1-211ENST00000399355 NLRP3Q96P20 1036 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 BCL9LQ86UU0 1499 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 ZNF804BA4D1E1 1349 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 CNTNAP5Q8WYK1 1306 aa13.38□□□□□ -0.27
ITSN1-211ENST00000399355 ZPR1O75312 459 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 RAD51AP2Q09MP3 1159 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 TTC38Q5R3I4 469 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 IQCA1Q86XH1 822 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 REXO1L1PQ8IX06 675 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 KIF18AQ8NI77 898 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 PKNOX2Q96KN3 472 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 GDAP1L1Q96MZ0 367 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 OSBPL5Q9H0X9 879 aaPredicted RBP13.37□□□□□ -0.27
ITSN1-211ENST00000399355 CACNA1SQ13698 1873 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 CASP14P31944 242 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 KRT2P35908 639 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 SCNN1DP51172 638 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 SAMD1Q6SPF0 538 aaPredicted RBP13.37□□□□□ -0.27
ITSN1-211ENST00000399355 VSTM4Q8IW00 320 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 GLIS3Q8NEA6 775 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 PLEKHA4Q9H4M7 779 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 CNNM2Q9H8M5 875 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 TULP1O00294 542 aaPredicted RBP13.37□□□□□ -0.27
ITSN1-211ENST00000399355 CDC25BP30305 580 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 PHF20Q9BVI0 1012 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 BSDC1Q9NW68 430 aaPredicted RBP13.37□□□□□ -0.27
ITSN1-211ENST00000399355 SPATA31A5Q5VU36 1347 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 SPATA31A7Q8IWB4 1347 aa13.37□□□□□ -0.27
ITSN1-211ENST00000399355 POLR3GO15318 223 aaPredicted RBP13.36□□□□□ -0.27
ITSN1-211ENST00000399355 TM4SF1P30408 202 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 ALX1Q15699 326 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 LRRC47Q8N1G4 583 aaKnown RBP13.36□□□□□ -0.27
ITSN1-211ENST00000399355 JMYQ8N9B5 988 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.36□□□□□ -0.27
ITSN1-211ENST00000399355 PRDM4Q9UKN5 801 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 TEX35Q5T0J7 233 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 MKNK2Q9HBH9 465 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 ANKRD36CQ5JPF3 1778 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 TMTC3Q6ZXV5 915 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 PNMA1Q8ND90 353 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 PPP2R2CQ9Y2T4 447 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 PNPLA7Q6ZV29 1317 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 ENC1O14682 589 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 RRAGBQ5VZM2 374 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 CHP1Q99653 195 aa13.36□□□□□ -0.27
ITSN1-211ENST00000399355 BAG1Q99933 345 aaPredicted RBP13.36□□□□□ -0.27
ITSN1-211ENST00000399355 SRPRBQ9Y5M8 271 aaKnown RBP13.36□□□□□ -0.27
ITSN1-211ENST00000399355 NHSL1Q5SYE7 1610 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 RILPL1Q5EBL4 403 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 JAKMIP3Q5VZ66 844 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 TPM3P06753 285 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 SLC16A2P36021 539 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 MORC3Q14149 939 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 ATL3Q6DD88 541 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 DNAAF5Q86Y56 855 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 CTCFLQ8NI51 663 aaPredicted RBP13.35□□□□□ -0.27
ITSN1-211ENST00000399355 ZBTB22O15209 634 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
ITSN1-211ENST00000399355 PARP10Q53GL7 1025 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 APTXQ7Z2E3 356 aaKnown RBP13.35□□□□□ -0.27
ITSN1-211ENST00000399355 COA7Q96BR5 231 aa13.35□□□□□ -0.27
ITSN1-211ENST00000399355 PDIA4P13667 645 aaKnown RBP13.34□□□□□ -0.27
ITSN1-211ENST00000399355 APBA1Q02410 837 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 MAPK8IP2Q13387 824 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-211ENST00000399355 DOK7Q18PE1 504 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 LETM2Q2VYF4 491 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 MSL1Q68DK7 614 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 FOXP1Q9H334 677 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-211ENST00000399355 IGSF22Q8N9C0 903 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 BCAS3Q9H6U6 928 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 BIN2Q9UBW5 565 aaPredicted RBP13.34□□□□□ -0.27
ITSN1-211ENST00000399355 FCER1AP12319 257 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 CLCN6P51797 869 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 FBXO33Q7Z6M2 555 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 CCDC155Q8N6L0 562 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 SYNRGQ9UMZ2 1314 aa13.34□□□□□ -0.27
ITSN1-211ENST00000399355 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 80.9 ms