RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 GNPATO15228 680 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 BMP15O95972 392 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 KIF5BP33176 963 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 UBE4AQ14139 1066 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 SMARCC1Q92922 1105 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 CTAGE1Q96RT6 745 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 FOXP1Q9H334 677 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 SLFN14P0C7P3 912 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 COPB1P53618 953 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 SPAG1Q07617 926 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 IKQ13123 557 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 MORC3Q14149 939 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 MMRN2Q9H8L6 949 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 C6orf50Q9HD87 102 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 FAM217BQ9NTX9 383 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 SALL1Q9NSC2 1324 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 SCG2P13521 617 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 CD44P16070 742 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 IBSPP21815 317 aaPredicted RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 TNNI2P48788 182 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 RPS8P62241 208 aaKnown RBP5.56□□□□□ -1.52
SMAD4-202ENST00000398417 HSP90B2PQ58FF3 399 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 BLIDQ8IZY5 108 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 GPCPD1Q9NPB8 672 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 NTSR2O95665 410 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 INF2Q27J81 1249 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 FKBP15Q5T1M5 1219 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 NEK11Q8NG66 645 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 ACBD3Q9H3P7 528 aa5.56□□□□□ -1.52
SMAD4-202ENST00000398417 TCRBV5S4A2TA0A5A2 114 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 KRT9P35527 623 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 TOB1P50616 345 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 NONOQ15233 471 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC181Q5TID7 509 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 RAD9BQ6WBX8 426 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 NELFCDQ8IXH7 590 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 JAKMIP2Q96AA8 810 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 BPIFA3Q9BQP9 254 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 PARD6BQ9BYG5 372 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 ANKRD2Q9GZV1 360 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 VPS18Q9P253 973 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 GTPBP6O43824 516 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 CAMTA2O94983 1202 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 LDHBP07195 334 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 PRDX5P30044 214 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 PTGDRQ13258 359 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 MCM6Q14566 821 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 CCDC40Q4G0X9 1142 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 EXOC1Q9NV70 894 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 HPSEQ9Y251 543 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 GABPB1Q06547 395 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 SPA17Q15506 151 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 PLEKHA4Q9H4M7 779 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 DDX41Q9UJV9 622 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 MST1RQ04912 1400 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 KCNJ18B7U540 433 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 DDAH1O94760 285 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 MECOMQ03112 1051 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 EVX2Q03828 476 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 KCNJ12Q14500 433 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 TDRD12Q587J7 1177 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 UTP14CQ5TAP6 766 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 TMTC3Q6ZXV5 915 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 SGMS1Q86VZ5 419 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 FCHSD1Q86WN1 690 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 NGLY1Q96IV0 654 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 NAPGQ99747 312 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 PHF20Q9BVI0 1012 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 MACROD2A1Z1Q3 448 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 ENC1O14682 589 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 STX10O60499 249 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 RPN1P04843 607 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 RBM5P52756 815 aaKnown RBP eCLIP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 ITPK1Q13572 414 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 NTRK3Q16288 839 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 SPTY2D1Q68D10 685 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 CEP112Q8N8E3 955 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 FAM84BQ96KN1 310 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 PIGSQ96S52 555 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 CEP89Q96ST8 783 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 TCP11L1Q9NUJ3 509 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 WDR19Q8NEZ3 1342 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 UFL1O94874 794 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 RFC4P35249 363 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 TPTE2Q6XPS3 522 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 DTHD1Q6ZMT9 781 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 ZSCAN29Q8IWY8 852 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 SRBD1Q8N5C6 995 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 POLR1AO95602 1720 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 PARP1P09874 1014 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 BTDP43251 543 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 CACNB1Q02641 598 aaPredicted RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 LRRC41Q15345 812 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 EEF2KMTQ96G04 330 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 C8orf37Q96NL8 207 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 NOC4LQ9BVI4 516 aaKnown RBP5.55□□□□□ -1.52
SMAD4-202ENST00000398417 RABEP2Q9H5N1 569 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 TMEM260Q9NX78 707 aa5.55□□□□□ -1.52
SMAD4-202ENST00000398417 A0A087X0B3 334 aa5.54□□□□□ -1.52
SMAD4-202ENST00000398417 USP17L3A6NCW0 530 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms