RNA–Protein interactions for RNA: ENST00000396345.1

HOXA9-202, Transcript of homeobox A9, humanhuman

TSL 2 BASIC

Gene HOXA9, Length 797 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-202ENST00000396345 TBC1D8O95759 1140 aa22.63■■□□□ 1.21
HOXA9-202ENST00000396345 IQCA1Q86XH1 822 aa22.63■■□□□ 1.21
HOXA9-202ENST00000396345 ZKSCAN3Q9BRR0 538 aa22.63■■□□□ 1.21
HOXA9-202ENST00000396345 ZFYVE28Q9HCC9 887 aa22.63■■□□□ 1.21
HOXA9-202ENST00000396345 FOXN1O15353 648 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 RAD21O60216 631 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 EIF5BO60841 1220 aaKnown RBP22.62■■□□□ 1.21
HOXA9-202ENST00000396345 ZKSCAN1P17029 563 aaPredicted RBP22.62■■□□□ 1.21
HOXA9-202ENST00000396345 VCAM1P19320 739 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 CRHR2Q13324 411 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 CCDC178Q5BJE1 867 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 KIAA1755Q5JYT7 1200 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 LPAR1Q92633 364 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 CFHR5Q9BXR6 569 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 USP26Q9BXU7 913 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 TSKSQ9UJT2 592 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 SYNPO2Q9UMS6 1093 aa22.62■■□□□ 1.21
HOXA9-202ENST00000396345 OSBPP22059 807 aa22.61■■□□□ 1.21
HOXA9-202ENST00000396345 HOXA7P31268 230 aaPredicted RBP22.61■■□□□ 1.21
HOXA9-202ENST00000396345 HSPA4P34932 840 aa22.61■■□□□ 1.21
HOXA9-202ENST00000396345 NOVP48745 357 aa22.61■■□□□ 1.21
HOXA9-202ENST00000396345 CYB5R4Q7L1T6 521 aa22.61■■□□□ 1.21
HOXA9-202ENST00000396345 SPICE1Q8N0Z3 855 aa22.61■■□□□ 1.21
HOXA9-202ENST00000396345 LRRC47Q8N1G4 583 aaKnown RBP22.61■■□□□ 1.21
HOXA9-202ENST00000396345 ZSCAN10Q96SZ4 725 aaPredicted RBP22.61■■□□□ 1.21
HOXA9-202ENST00000396345 PARK7Q99497 189 aaKnown RBP22.61■■□□□ 1.21
HOXA9-202ENST00000396345 PNMA3Q9UL41 463 aa22.61■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L15C9J2P7 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L13C9JLJ4 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L11C9JVI0 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L18D6R9N7 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L22D6RA61 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L17D6RBQ6 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L19D6RCP7 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L20D6RJB6 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 F5H6K3 240 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 CYP2C8P10632 490 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 KLRC3Q07444 240 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 USP17L24Q0WX57 530 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 TSGA10IPQ3SY00 556 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 RASEFQ8IZ41 740 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 TTC14Q96N46 770 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 UBAC1Q9BSL1 405 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 ASCC2Q9H1I8 757 aaPredicted RBP22.6■■□□□ 1.21
HOXA9-202ENST00000396345 R3HDMLQ9H3Y0 253 aa22.6■■□□□ 1.21
HOXA9-202ENST00000396345 RPAP3Q9H6T3 665 aaPredicted RBP22.6■■□□□ 1.21
HOXA9-202ENST00000396345 TOP1P11387 765 aaKnown RBP22.59■■□□□ 1.21
HOXA9-202ENST00000396345 CTCFP49711 727 aaPredicted RBP22.59■■□□□ 1.21
HOXA9-202ENST00000396345 IRX3P78415 501 aaPredicted RBP22.59■■□□□ 1.21
HOXA9-202ENST00000396345 RCSD1Q6JBY9 416 aa22.59■■□□□ 1.21
HOXA9-202ENST00000396345 DGKHQ86XP1 1220 aa22.59■■□□□ 1.21
HOXA9-202ENST00000396345 MB21D2Q8IYB1 491 aaPredicted RBP22.59■■□□□ 1.21
HOXA9-202ENST00000396345 GMCL1P1Q8NEA9 526 aa22.59■■□□□ 1.21
HOXA9-202ENST00000396345 KCNB2Q92953 911 aa22.59■■□□□ 1.21
HOXA9-202ENST00000396345 WDR46O15213 610 aaKnown RBP22.58■■□□□ 1.21
HOXA9-202ENST00000396345 NDUFB10O96000 172 aa22.58■■□□□ 1.21
HOXA9-202ENST00000396345 MCCP23508 829 aa22.58■■□□□ 1.21
HOXA9-202ENST00000396345 KRT32Q14532 448 aa22.58■■□□□ 1.21
HOXA9-202ENST00000396345 C8orf34Q49A92 452 aa22.58■■□□□ 1.21
HOXA9-202ENST00000396345 CATSPERGQ6ZRH7 1159 aa22.58■■□□□ 1.21
HOXA9-202ENST00000396345 TMEM47Q9BQJ4 181 aa22.58■■□□□ 1.21
HOXA9-202ENST00000396345 TNKSO95271 1327 aa22.57■■□□□ 1.2
HOXA9-202ENST00000396345 TLR2O60603 784 aa22.57■■□□□ 1.2
HOXA9-202ENST00000396345 HSPA8P11142 646 aaKnown RBP22.57■■□□□ 1.2
HOXA9-202ENST00000396345 SLFN13Q68D06 897 aa22.57■■□□□ 1.2
HOXA9-202ENST00000396345 ENAHQ8N8S7 591 aaPredicted RBP22.57■■□□□ 1.2
HOXA9-202ENST00000396345 SMCR8Q8TEV9 937 aaPredicted RBP22.57■■□□□ 1.2
HOXA9-202ENST00000396345 ANKS1AQ92625 1134 aa22.57■■□□□ 1.2
HOXA9-202ENST00000396345 TANGO6Q9C0B7 1094 aa22.57■■□□□ 1.2
HOXA9-202ENST00000396345 MCM5P33992 734 aa22.56■■□□□ 1.2
HOXA9-202ENST00000396345 SART3Q15020 963 aaKnown RBP22.56■■□□□ 1.2
HOXA9-202ENST00000396345 CHST3Q7LGC8 479 aa22.56■■□□□ 1.2
HOXA9-202ENST00000396345 NEK1Q96PY6 1258 aa22.56■■□□□ 1.2
HOXA9-202ENST00000396345 P2RX7Q99572 595 aaKnown RBP22.56■■□□□ 1.2
HOXA9-202ENST00000396345 SNX14Q9Y5W7 946 aa22.56■■□□□ 1.2
HOXA9-202ENST00000396345 ADGRA2Q96PE1 1338 aa22.56■■□□□ 1.2
HOXA9-202ENST00000396345 GPR25O00155 361 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 IFIT3O14879 490 aaKnown RBP22.55■■□□□ 1.2
HOXA9-202ENST00000396345 SEC24BO95487 1268 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 ANTXR2P58335 489 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 ADCK5Q3MIX3 580 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 FAM83BQ5T0W9 1011 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 NUP88Q99567 741 aaPredicted RBP22.55■■□□□ 1.2
HOXA9-202ENST00000396345 KAT14Q9H8E8 782 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 PRDM10Q9NQV6 1147 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 CPA4Q9UI42 421 aa22.55■■□□□ 1.2
HOXA9-202ENST00000396345 ERICH2A1L162 156 aa22.54■■□□□ 1.2
HOXA9-202ENST00000396345 PRC1O43663 620 aa22.54■■□□□ 1.2
HOXA9-202ENST00000396345 CAPN15O75808 1086 aa22.54■■□□□ 1.2
HOXA9-202ENST00000396345 LBX1P52954 281 aa22.54■■□□□ 1.2
HOXA9-202ENST00000396345 SEC23AQ15436 765 aa22.54■■□□□ 1.2
HOXA9-202ENST00000396345 NOM1Q5C9Z4 860 aaKnown RBP22.54■■□□□ 1.2
HOXA9-202ENST00000396345 IFIT1BQ5T764 474 aaKnown RBP22.54■■□□□ 1.2
HOXA9-202ENST00000396345 C17orf99Q6UX52 265 aa22.54■■□□□ 1.2
HOXA9-202ENST00000396345 MTMR7Q9Y216 660 aa22.54■■□□□ 1.2
HOXA9-202ENST00000396345 FLOT1O75955 427 aa22.53■■□□□ 1.2
HOXA9-202ENST00000396345 BMP3P12645 472 aa22.53■■□□□ 1.2
HOXA9-202ENST00000396345 SLC1A4P43007 532 aa22.53■■□□□ 1.2
HOXA9-202ENST00000396345 GCLCP48506 637 aaPredicted RBP22.53■■□□□ 1.2
HOXA9-202ENST00000396345 HERVK_113P62684 666 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms