RNA–Protein interactions for RNA: ENST00000393952.3

LRFN4-202, Transcript of leucine rich repeat and fibronectin type III domain containing 4, humanhuman

TSL 5 BASIC

Gene LRFN4, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN4-202ENST00000393952 CPLX1O14810 134 aa28.31■■■□□ 2.12
LRFN4-202ENST00000393952 SCYL3Q8IZE3 742 aa28.31■■■□□ 2.12
LRFN4-202ENST00000393952 CTCFLQ8NI51 663 aaPredicted RBP28.31■■■□□ 2.12
LRFN4-202ENST00000393952 LLPHQ9BRT6 129 aaKnown RBP28.31■■■□□ 2.12
LRFN4-202ENST00000393952 PAPPA2Q9BXP8 1791 aa28.3■■■□□ 2.12
LRFN4-202ENST00000393952 A0A1W2PRG0 241 aa28.3■■■□□ 2.12
LRFN4-202ENST00000393952 TRAF5O00463 557 aa28.3■■■□□ 2.12
LRFN4-202ENST00000393952 PPFIA3O75145 1194 aa28.3■■■□□ 2.12
LRFN4-202ENST00000393952 GRM4Q14833 912 aa28.3■■■□□ 2.12
LRFN4-202ENST00000393952 DDX55Q8NHQ9 600 aaKnown RBP eCLIP28.3■■■□□ 2.12
LRFN4-202ENST00000393952 SMARCC2Q8TAQ2 1214 aa28.3■■■□□ 2.12
LRFN4-202ENST00000393952 ACER1Q8TDN7 264 aa28.3■■■□□ 2.12
LRFN4-202ENST00000393952 OTOFQ9HC10 1997 aa28.29■■■□□ 2.12
LRFN4-202ENST00000393952 PTPDC1A2A3K4 754 aa28.29■■■□□ 2.12
LRFN4-202ENST00000393952 PPP1R12BO60237 982 aaPredicted RBP28.29■■■□□ 2.12
LRFN4-202ENST00000393952 PPP2R5BQ15173 497 aa28.29■■■□□ 2.12
LRFN4-202ENST00000393952 MAP3K14Q99558 947 aa28.29■■■□□ 2.12
LRFN4-202ENST00000393952 ARHGEF10LQ9HCE6 1279 aa28.29■■■□□ 2.12
LRFN4-202ENST00000393952 CCDC196A0A1B0GTZ2 297 aa28.28■■■□□ 2.12
LRFN4-202ENST00000393952 GJB2P29033 226 aa28.28■■■□□ 2.12
LRFN4-202ENST00000393952 DDIT3P35638 169 aa28.28■■■□□ 2.12
LRFN4-202ENST00000393952 FMR1Q06787 632 aaKnown RBP eCLIP28.28■■■□□ 2.12
LRFN4-202ENST00000393952 NTRK3Q16288 839 aa28.28■■■□□ 2.12
LRFN4-202ENST00000393952 DDX11Q96FC9 970 aa28.28■■■□□ 2.12
LRFN4-202ENST00000393952 CWC22Q9HCG8 908 aaKnown RBP28.28■■■□□ 2.12
LRFN4-202ENST00000393952 RBM28Q9NW13 759 aaKnown RBP28.28■■■□□ 2.12
LRFN4-202ENST00000393952 USP17L5A8MUK1 530 aa28.28■■■□□ 2.12
LRFN4-202ENST00000393952 ECE1P42892 770 aa28.28■■■□□ 2.12
LRFN4-202ENST00000393952 CMTR1Q8N1G2 835 aaKnown RBP28.28■■■□□ 2.12
LRFN4-202ENST00000393952 PLEKHA8P1O95397 391 aa28.27■■■□□ 2.12
LRFN4-202ENST00000393952 PDHBP11177 359 aa28.27■■■□□ 2.12
LRFN4-202ENST00000393952 KIF5BP33176 963 aa28.27■■■□□ 2.12
LRFN4-202ENST00000393952 CPLX2Q6PUV4 134 aaKnown RBP28.27■■■□□ 2.12
LRFN4-202ENST00000393952 TMTC3Q6ZXV5 915 aa28.27■■■□□ 2.12
LRFN4-202ENST00000393952 STAG2Q8N3U4 1231 aa28.27■■■□□ 2.12
LRFN4-202ENST00000393952 MAD2L2Q9UI95 211 aa28.27■■■□□ 2.12
LRFN4-202ENST00000393952 MAP3K9P80192 1104 aa28.26■■■□□ 2.11
LRFN4-202ENST00000393952 NOL9Q5SY16 702 aaKnown RBP28.26■■■□□ 2.11
LRFN4-202ENST00000393952 USP17L2Q6R6M4 530 aa28.26■■■□□ 2.11
LRFN4-202ENST00000393952 MOB2Q70IA6 237 aa28.26■■■□□ 2.11
LRFN4-202ENST00000393952 PICK1Q9NRD5 415 aa28.26■■■□□ 2.11
LRFN4-202ENST00000393952 CDKL5O76039 1030 aa28.25■■■□□ 2.11
LRFN4-202ENST00000393952 PARP1P09874 1014 aaKnown RBP28.25■■■□□ 2.11
LRFN4-202ENST00000393952 GOLGA8HP0CJ92 632 aa28.25■■■□□ 2.11
LRFN4-202ENST00000393952 IFNAR1P17181 557 aa28.25■■■□□ 2.11
LRFN4-202ENST00000393952 IREB2P48200 963 aaKnown RBP28.25■■■□□ 2.11
LRFN4-202ENST00000393952 TTLL12Q14166 644 aaPredicted RBP28.25■■■□□ 2.11
LRFN4-202ENST00000393952 PPP1R3FQ6ZSY5 799 aaPredicted RBP28.25■■■□□ 2.11
LRFN4-202ENST00000393952 PHKBQ93100 1093 aa28.25■■■□□ 2.11
LRFN4-202ENST00000393952 TMX2Q9Y320 296 aa28.25■■■□□ 2.11
LRFN4-202ENST00000393952 PALM3A6NDB9 673 aaPredicted RBP28.24■■■□□ 2.11
LRFN4-202ENST00000393952 RAD21O60216 631 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 SNHG28P0DPA3 235 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 SLFN13Q68D06 897 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 CCDC82Q8N4S0 544 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 GMCL1P1Q8NEA9 526 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 ZNF408Q9H9D4 720 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 SYNPO2Q9UMS6 1093 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 FRMPD2Q68DX3 1309 aaPredicted RBP28.24■■■□□ 2.11
LRFN4-202ENST00000393952 F5H6K3 240 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 PTPRAP18433 802 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 HMGN5P82970 282 aaKnown RBP28.24■■■□□ 2.11
LRFN4-202ENST00000393952 KLRC3Q07444 240 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 VGLL4Q14135 290 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 CHADLQ6NUI6 762 aa28.24■■■□□ 2.11
LRFN4-202ENST00000393952 SRBD1Q8N5C6 995 aaKnown RBP28.24■■■□□ 2.11
LRFN4-202ENST00000393952 GPBP1L1Q9HC44 474 aaPredicted RBP28.24■■■□□ 2.11
LRFN4-202ENST00000393952 PHIPQ8WWQ0 1821 aa28.23■■■□□ 2.11
LRFN4-202ENST00000393952 NDUFB10O96000 172 aa28.23■■■□□ 2.11
LRFN4-202ENST00000393952 FDPSP14324 419 aaKnown RBP28.23■■■□□ 2.11
LRFN4-202ENST00000393952 FUT2Q10981 343 aa28.23■■■□□ 2.11
LRFN4-202ENST00000393952 NBPF11Q86T75 865 aa28.23■■■□□ 2.11
LRFN4-202ENST00000393952 SH2D4AQ9H788 454 aa28.23■■■□□ 2.11
LRFN4-202ENST00000393952 ORC3Q9UBD5 711 aaPredicted RBP28.23■■■□□ 2.11
LRFN4-202ENST00000393952 SNCAIPQ9Y6H5 919 aa28.23■■■□□ 2.11
LRFN4-202ENST00000393952 BAZ2BQ9UIF8 2168 aaKnown RBP28.22■■■□□ 2.11
LRFN4-202ENST00000393952 MAP3K11Q16584 847 aa28.22■■■□□ 2.11
LRFN4-202ENST00000393952 DCAF4Q8WV16 495 aa28.22■■■□□ 2.11
LRFN4-202ENST00000393952 SLC26A6Q9BXS9 759 aa28.22■■■□□ 2.11
LRFN4-202ENST00000393952 CSADQ9Y600 493 aa28.22■■■□□ 2.11
LRFN4-202ENST00000393952 MYH6P13533 1939 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 GNAQP50148 359 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 SSRP1Q08945 709 aaKnown RBP28.21■■■□□ 2.11
LRFN4-202ENST00000393952 ZNF543Q08ER8 600 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 ZYXQ15942 572 aaKnown RBP28.21■■■□□ 2.11
LRFN4-202ENST00000393952 CCDC96Q2M329 555 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 ASPRV1Q53RT3 343 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 KIAA1755Q5JYT7 1200 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 ARMC9Q7Z3E5 817 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 FEZ1Q99689 392 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.21■■■□□ 2.11
LRFN4-202ENST00000393952 CNTNAP5Q8WYK1 1306 aa28.21■■■□□ 2.11
LRFN4-202ENST00000393952 KLRF2D3W0D1 207 aa28.2■■■□□ 2.11
LRFN4-202ENST00000393952 FMNL1O95466 1100 aaPredicted RBP28.2■■■□□ 2.11
LRFN4-202ENST00000393952 SLC35G1Q2M3R5 365 aa28.2■■■□□ 2.11
LRFN4-202ENST00000393952 FAM184AQ8NB25 1140 aa28.2■■■□□ 2.11
LRFN4-202ENST00000393952 WDR18Q9BV38 432 aa28.2■■■□□ 2.11
LRFN4-202ENST00000393952 GOPCQ9HD26 462 aa28.2■■■□□ 2.11
LRFN4-202ENST00000393952 GPCPD1Q9NPB8 672 aa28.2■■■□□ 2.11
LRFN4-202ENST00000393952 SPICE1Q8N0Z3 855 aa28.2■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 244.8 ms