RNA–Protein interactions for RNA: ENST00000393577.7

HMGA2-202, Transcript of high mobility group AT-hook 2, humanhuman

TSL 3 BASIC

Gene HMGA2, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-202ENST00000393577 ERVK-9P63128 1117 aa27.6■■■□□ 2.01
HMGA2-202ENST00000393577 ERVK-24P63145 666 aa27.6■■■□□ 2.01
HMGA2-202ENST00000393577 PPARAQ07869 468 aa27.6■■■□□ 2.01
HMGA2-202ENST00000393577 MCMDC2Q4G0Z9 681 aa27.6■■■□□ 2.01
HMGA2-202ENST00000393577 VCPKMTQ9H867 229 aa27.6■■■□□ 2.01
HMGA2-202ENST00000393577 ZNF287Q9HBT7 754 aa27.6■■■□□ 2.01
HMGA2-202ENST00000393577 Q3C1V9 767 aa27.59■■■□□ 2.01
HMGA2-202ENST00000393577 SPICE1Q8N0Z3 855 aa27.59■■■□□ 2.01
HMGA2-202ENST00000393577 LPAR1Q92633 364 aa27.59■■■□□ 2.01
HMGA2-202ENST00000393577 TMEM106CQ9BVX2 250 aa27.59■■■□□ 2.01
HMGA2-202ENST00000393577 TANGO6Q9C0B7 1094 aa27.59■■■□□ 2.01
HMGA2-202ENST00000393577 SPDYE16A6NNV3 312 aaPredicted RBP27.58■■■□□ 2.01
HMGA2-202ENST00000393577 PDE4AP27815 886 aa27.58■■■□□ 2.01
HMGA2-202ENST00000393577 ZNF444Q8N0Y2 327 aaPredicted RBP27.58■■■□□ 2.01
HMGA2-202ENST00000393577 SLAIN1Q8ND83 568 aa27.58■■■□□ 2.01
HMGA2-202ENST00000393577 RABGAP1Q9Y3P9 1069 aa27.58■■■□□ 2.01
HMGA2-202ENST00000393577 ADCY3O60266 1144 aa27.57■■■□□ 2
HMGA2-202ENST00000393577 CNMDO75829 334 aa27.57■■■□□ 2
HMGA2-202ENST00000393577 SLC3A2P08195 630 aaKnown RBP27.57■■■□□ 2
HMGA2-202ENST00000393577 SDSP20132 328 aa27.57■■■□□ 2
HMGA2-202ENST00000393577 PDE4BQ07343 736 aa27.57■■■□□ 2
HMGA2-202ENST00000393577 IRF5Q13568 498 aa27.57■■■□□ 2
HMGA2-202ENST00000393577 ZNF589Q86UQ0 364 aaPredicted RBP27.57■■■□□ 2
HMGA2-202ENST00000393577 BIN2Q9UBW5 565 aaPredicted RBP27.57■■■□□ 2
HMGA2-202ENST00000393577 PLXNB2O15031 1838 aa27.57■■■□□ 2
HMGA2-202ENST00000393577 RLFQ13129 1914 aa27.57■■■□□ 2
HMGA2-202ENST00000393577 BRCA2P51587 3418 aa27.56■■■□□ 2
HMGA2-202ENST00000393577 LBX2Q6XYB7 198 aa27.56■■■□□ 2
HMGA2-202ENST00000393577 PORCNQ9H237 461 aa27.56■■■□□ 2
HMGA2-202ENST00000393577 MYH4Q9Y623 1939 aa27.56■■■□□ 2
HMGA2-202ENST00000393577 ELNP15502 786 aa27.55■■■□□ 2
HMGA2-202ENST00000393577 MTFR1Q15390 333 aa27.55■■■□□ 2
HMGA2-202ENST00000393577 CCAR1Q8IX12 1150 aaKnown RBP27.55■■■□□ 2
HMGA2-202ENST00000393577 GOPCQ9HD26 462 aa27.55■■■□□ 2
HMGA2-202ENST00000393577 CCDC171Q6TFL3 1326 aa27.55■■■□□ 2
HMGA2-202ENST00000393577 PARP14Q460N5 1801 aa27.55■■■□□ 2
HMGA2-202ENST00000393577 WDR46O15213 610 aaKnown RBP27.54■■■□□ 2
HMGA2-202ENST00000393577 RAD21O60216 631 aa27.54■■■□□ 2
HMGA2-202ENST00000393577 MAPK4P31152 587 aa27.54■■■□□ 2
HMGA2-202ENST00000393577 CTDSPL2Q05D32 466 aa27.54■■■□□ 2
HMGA2-202ENST00000393577 COG2Q14746 738 aa27.54■■■□□ 2
HMGA2-202ENST00000393577 BTBD7Q9P203 1132 aa27.54■■■□□ 2
HMGA2-202ENST00000393577 GJD2Q9UKL4 321 aa27.54■■■□□ 2
HMGA2-202ENST00000393577 A0A0G2JMZ2 1700 aa27.53■■■□□ 2
HMGA2-202ENST00000393577 IGKV6D-41A0A0C4DH26 115 aa27.53■■■□□ 2
HMGA2-202ENST00000393577 EN2P19622 333 aaPredicted RBP27.53■■■□□ 2
HMGA2-202ENST00000393577 UBXN2AP68543 259 aa27.53■■■□□ 2
HMGA2-202ENST00000393577 ALX1Q15699 326 aa27.53■■■□□ 2
HMGA2-202ENST00000393577 PXYLP1Q8TE99 480 aa27.53■■■□□ 2
HMGA2-202ENST00000393577 HOXC10Q9NYD6 342 aa27.53■■■□□ 2
HMGA2-202ENST00000393577 NYAP2Q9P242 653 aa27.53■■■□□ 2
HMGA2-202ENST00000393577 PLIN4Q96Q06 1357 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 FLOT1O75955 427 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 TSPY3P0CV98 308 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 TSPY8P0CW00 308 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 HSPD1P10809 573 aaKnown RBP27.52■■■□□ 2
HMGA2-202ENST00000393577 CCNA1P78396 465 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 FAM47AQ5JRC9 791 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 GPR142Q7Z601 462 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 CEP95Q96GE4 821 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 DIAPH3Q9NSV4 1193 aa27.52■■■□□ 2
HMGA2-202ENST00000393577 INHAP05111 366 aa27.51■■□□□ 1.99
HMGA2-202ENST00000393577 DSG3P32926 999 aa27.51■■□□□ 1.99
HMGA2-202ENST00000393577 SAMD1Q6SPF0 538 aaPredicted RBP27.51■■□□□ 1.99
HMGA2-202ENST00000393577 CWC27Q6UX04 472 aaKnown RBP27.51■■□□□ 1.99
HMGA2-202ENST00000393577 CWC22Q9HCG8 908 aaKnown RBP27.51■■□□□ 1.99
HMGA2-202ENST00000393577 CLIP2Q9UDT6 1046 aa27.51■■□□□ 1.99
HMGA2-202ENST00000393577 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.51■■□□□ 1.99
HMGA2-202ENST00000393577 TNRC18O15417 2968 aaPredicted RBP27.51■■□□□ 1.99
HMGA2-202ENST00000393577 FGAP02671 866 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 CCL5P13501 91 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 TFAP4Q01664 338 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 TTC22Q5TAA0 569 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 PLEKHH3Q7Z736 793 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 NEDD1Q8NHV4 660 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 SOCS4Q8WXH5 440 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 NUDT12Q9BQG2 462 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 INCENPQ9NQS7 918 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 MTMR4Q9NYA4 1195 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 ANAPC4Q9UJX5 808 aa27.5■■□□□ 1.99
HMGA2-202ENST00000393577 HIP1O00291 1037 aa27.49■■□□□ 1.99
HMGA2-202ENST00000393577 GSPT1P15170 499 aaKnown RBP27.49■■□□□ 1.99
HMGA2-202ENST00000393577 CYP2B6P20813 491 aa27.49■■□□□ 1.99
HMGA2-202ENST00000393577 MFAP1P55081 439 aaKnown RBP27.49■■□□□ 1.99
HMGA2-202ENST00000393577 FAM83BQ5T0W9 1011 aa27.49■■□□□ 1.99
HMGA2-202ENST00000393577 WDR78Q5VTH9 848 aa27.49■■□□□ 1.99
HMGA2-202ENST00000393577 ATG4CQ96DT6 458 aa27.49■■□□□ 1.99
HMGA2-202ENST00000393577 TACC3Q9Y6A5 838 aa27.49■■□□□ 1.99
HMGA2-202ENST00000393577 ZMYM6O95789 1325 aa27.48■■□□□ 1.99
HMGA2-202ENST00000393577 RNF208Q9H0X6 261 aa27.48■■□□□ 1.99
HMGA2-202ENST00000393577 COL11A1P12107 1806 aaPredicted RBP27.48■■□□□ 1.99
HMGA2-202ENST00000393577 TTLL1O95922 423 aa27.47■■□□□ 1.99
HMGA2-202ENST00000393577 NDUFB10O96000 172 aa27.47■■□□□ 1.99
HMGA2-202ENST00000393577 LRRC47Q8N1G4 583 aaKnown RBP27.47■■□□□ 1.99
HMGA2-202ENST00000393577 MB21D1Q8N884 522 aa27.47■■□□□ 1.99
HMGA2-202ENST00000393577 NUP88Q99567 741 aaPredicted RBP27.47■■□□□ 1.99
HMGA2-202ENST00000393577 UNC93B1Q9H1C4 597 aa27.47■■□□□ 1.99
HMGA2-202ENST00000393577 FBXO28Q9NVF7 368 aa27.47■■□□□ 1.99
HMGA2-202ENST00000393577 TSPY2A6NKD2 308 aa27.46■■□□□ 1.99
HMGA2-202ENST00000393577 F5H6K3 240 aa27.46■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms