RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 JARID2Q92833 1246 aaPredicted RBP2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 WDR89Q96FK6 387 aaPredicted RBP2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 ACSBG1Q96GR2 724 aa2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 WDR18Q9BV38 432 aa2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 MIR1-1HGQ9H1L0 117 aa2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 COPRSQ9NQ92 184 aa2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 KBTBD4Q9NVX7 518 aa2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 PCDHA4Q9UN74 947 aa2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 EPB41L3Q9Y2J2 1087 aaPredicted RBP2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 PCDHB5Q9Y5E4 795 aa2.76□□□□□ -1.97
RNU6-440P-201ENST00000390882 ROBO2Q9HCK4 1378 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 TEX51A0A1B0GUA7 166 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 F6X3S4 739 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 GREM1O60565 184 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 ERCC5P28715 1186 aaPredicted RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 RACK1P63244 317 aaKnown RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 ID3Q02535 119 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 PTPN11Q06124 597 aaPredicted RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZC3H12AQ5D1E8 599 aaKnown RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 FBXL19Q6PCT2 694 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 GOLM1Q8NBJ4 401 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZNF296Q8WUU4 475 aaPredicted RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 GATAD2BQ8WXI9 593 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 RHOVQ96L33 236 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 HEXIM2Q96MH2 286 aaKnown RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 TGIF2Q9GZN2 237 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 KCNQ5Q9NR82 932 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 IGSF5Q9NSI5 407 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 DDX41Q9UJV9 622 aaKnown RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 PPP1R9AQ9ULJ8 1098 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 SUPT16HQ9Y5B9 1047 aaKnown RBP2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 SNCAIPQ9Y6H5 919 aa2.75□□□□□ -1.97
RNU6-440P-201ENST00000390882 MYOCOSA0A1B0GUC4 107 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 FAM221AA4D161 298 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 SLC22A31A6NKX4 558 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 IGF2BP3O00425 579 aaKnown RBP eCLIP2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 GFRA2O00451 464 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 TMPRSS2O15393 492 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 CILPO75339 1184 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 F13A1P00488 732 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 GARTP22102 1010 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 CLCN7P51798 805 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 AFF3P51826 1226 aaKnown RBP2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 ERVK-24P63145 666 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 ADAM17P78536 824 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 FAM160A1Q05DH4 1040 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 RING1Q06587 406 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 RAD51AP2Q09MP3 1159 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 SEPT6Q14141 434 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 INPP5AQ14642 412 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 RTP5Q14D33 572 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZNF394Q53GI3 561 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 SNAP47Q5SQN1 464 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 BNC2Q6ZN30 1099 aaPredicted RBP2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 HDXQ7Z353 690 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 C12orf40Q86WS4 652 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 KIAA0825Q8IV33 1275 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 MYLIPQ8WY64 445 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 DACT3Q96B18 629 aaPredicted RBP2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 ELMO3Q96BJ8 720 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 FANCD2OSQ96PS1 177 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 SPON2Q9BUD6 331 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 NT5C1AQ9BXI3 368 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 ATXN3LQ9H3M9 355 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 PIDD1Q9HB75 910 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 GCM1Q9NP62 436 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 DISC1Q9NRI5 854 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 ADAMTS1Q9UHI8 967 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 GTF2IRD1Q9UHL9 959 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 PCDHGC5Q9Y5F6 944 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 TACC3Q9Y6A5 838 aa2.74□□□□□ -1.97
RNU6-440P-201ENST00000390882 DCDC2CA8MYV0 355 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 C1QTNF3-AMACRE9PGA6 284 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 FANCGO15287 622 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 RNGTTO60942 597 aaKnown RBP2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 BPNT1O95861 308 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 C6P13671 934 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 ACVRL1P37023 503 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 RPL6Q02878 288 aaKnown RBP2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 MPP2Q14168 576 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 SSPNQ14714 243 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 NKPD1Q17RQ9 610 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 LRFN4Q6PJG9 635 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 FAM196AQ6ZSG2 479 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 IRF2BP1Q8IU81 584 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZFPM1Q8IX07 1006 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 SMYD4Q8IYR2 804 aaPredicted RBP2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 SYT8Q8NBV8 401 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 RNF214Q8ND24 703 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 ZNF507Q8TCN5 953 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 NKD1Q969G9 470 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 GAL3ST3Q96A11 431 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 PLPPR2Q96GM1 343 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 EAF1Q96JC9 268 aaPredicted RBP2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 SPATA32Q96LK8 384 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 WNT10AQ9GZT5 417 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 CCSER2Q9H7U1 834 aa2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 SSU72Q9NP77 194 aaKnown RBP2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 LUC7LQ9NQ29 371 aaKnown RBP2.73□□□□□ -1.97
RNU6-440P-201ENST00000390882 PICK1Q9NRD5 415 aa2.73□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms