RNA–Protein interactions for RNA: ENST00000380996.9

TSSC4-203, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TSSC4, Length 1,544 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-203ENST00000380996 SH2D4AQ9H788 454 aa23.8■■□□□ 1.4
TSSC4-203ENST00000380996 CIZ1Q9ULV3 898 aaPredicted RBP23.8■■□□□ 1.4
TSSC4-203ENST00000380996 GREB1LQ9C091 1923 aaPredicted RBP23.8■■□□□ 1.4
TSSC4-203ENST00000380996 PTPDC1A2A3K4 754 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 INPP5BP32019 993 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 GRM4Q14833 912 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 MAP1SQ66K74 1059 aaPredicted RBP23.79■■□□□ 1.4
TSSC4-203ENST00000380996 SIAH1Q8IUQ4 282 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 SCYL3Q8IZE3 742 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 PICK1Q9NRD5 415 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 SSC5DA1L4H1 1573 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 USP2O75604 605 aaPredicted RBP23.79■■□□□ 1.4
TSSC4-203ENST00000380996 CTDNEP1O95476 244 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 IFNAR1P17181 557 aa23.79■■□□□ 1.4
TSSC4-203ENST00000380996 IREB2P48200 963 aaKnown RBP23.79■■□□□ 1.4
TSSC4-203ENST00000380996 JAK2O60674 1132 aa23.78■■□□□ 1.4
TSSC4-203ENST00000380996 PARP1P09874 1014 aaKnown RBP23.78■■□□□ 1.4
TSSC4-203ENST00000380996 DLK2Q6UY11 383 aa23.78■■□□□ 1.4
TSSC4-203ENST00000380996 FAM184AQ8NB25 1140 aa23.78■■□□□ 1.4
TSSC4-203ENST00000380996 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.78■■□□□ 1.4
TSSC4-203ENST00000380996 LZTS2Q9BRK4 669 aa23.78■■□□□ 1.4
TSSC4-203ENST00000380996 MTMR7Q9Y216 660 aa23.78■■□□□ 1.4
TSSC4-203ENST00000380996 POLR2AP24928 1970 aaKnown RBP23.78■■□□□ 1.4
TSSC4-203ENST00000380996 USP17L5A8MUK1 530 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 PDIA4P13667 645 aaKnown RBP23.77■■□□□ 1.4
TSSC4-203ENST00000380996 PDCP20941 246 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 DDIT3P35638 169 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 MAP3K9P80192 1104 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 PRKG1Q13976 671 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 NTRK3Q16288 839 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 NOL9Q5SY16 702 aaKnown RBP23.77■■□□□ 1.4
TSSC4-203ENST00000380996 TMTC3Q6ZXV5 915 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 TRIM22Q8IYM9 498 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 GMCL1P1Q8NEA9 526 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 CHMP5Q9NZZ3 219 aa23.77■■□□□ 1.4
TSSC4-203ENST00000380996 PDHBP11177 359 aa23.76■■□□□ 1.39
TSSC4-203ENST00000380996 SSRP1Q08945 709 aaKnown RBP23.76■■□□□ 1.39
TSSC4-203ENST00000380996 ASPRV1Q53RT3 343 aa23.76■■□□□ 1.39
TSSC4-203ENST00000380996 ZKSCAN4Q969J2 545 aaPredicted RBP23.76■■□□□ 1.39
TSSC4-203ENST00000380996 DDX11Q96FC9 970 aa23.76■■□□□ 1.39
TSSC4-203ENST00000380996 GOPCQ9HD26 462 aa23.76■■□□□ 1.39
TSSC4-203ENST00000380996 MAD2L2Q9UI95 211 aa23.76■■□□□ 1.39
TSSC4-203ENST00000380996 TMX2Q9Y320 296 aa23.76■■□□□ 1.39
TSSC4-203ENST00000380996 PALM3A6NDB9 673 aaPredicted RBP23.75■■□□□ 1.39
TSSC4-203ENST00000380996 SNHG28P0DPA3 235 aa23.75■■□□□ 1.39
TSSC4-203ENST00000380996 ARMC9Q7Z3E5 817 aa23.75■■□□□ 1.39
TSSC4-203ENST00000380996 DCAF4Q8WV16 495 aa23.75■■□□□ 1.39
TSSC4-203ENST00000380996 AS3MTQ9HBK9 375 aa23.75■■□□□ 1.39
TSSC4-203ENST00000380996 ORC3Q9UBD5 711 aaPredicted RBP23.75■■□□□ 1.39
TSSC4-203ENST00000380996 FZD1Q9UP38 647 aa23.75■■□□□ 1.39
TSSC4-203ENST00000380996 F5H6K3 240 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 AKAP17AQ02040 695 aaKnown RBP23.74■■□□□ 1.39
TSSC4-203ENST00000380996 KLRC3Q07444 240 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 TTLL12Q14166 644 aaPredicted RBP23.74■■□□□ 1.39
TSSC4-203ENST00000380996 GPATCH4Q5T3I0 446 aaKnown RBP23.74■■□□□ 1.39
TSSC4-203ENST00000380996 SLFN13Q68D06 897 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 CSADQ9Y600 493 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 STK36Q9NRP7 1315 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 A0A1W2PRG0 241 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 RAD21O60216 631 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 FMNL1O95466 1100 aaPredicted RBP23.74■■□□□ 1.39
TSSC4-203ENST00000380996 PTPRAP18433 802 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 NUCB2P80303 420 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 USP17L2Q6R6M4 530 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 ACER1Q8TDN7 264 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 SLC26A6Q9BXS9 759 aa23.74■■□□□ 1.39
TSSC4-203ENST00000380996 KLRF2D3W0D1 207 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 PLEKHA8P1O95397 391 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 SMARCA1P28370 1054 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 ECE1P42892 770 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 SLC1A4P43007 532 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 ZNF543Q08ER8 600 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 MAP3K11Q16584 847 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 LARP1BQ659C4 914 aaKnown RBP23.73■■□□□ 1.39
TSSC4-203ENST00000380996 STAG2Q8N3U4 1231 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 CCDC82Q8N4S0 544 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 WASF1Q92558 559 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 PHKBQ93100 1093 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 GMCL1Q96IK5 515 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 FEZ1Q99689 392 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 WDR18Q9BV38 432 aa23.73■■□□□ 1.39
TSSC4-203ENST00000380996 RNF26Q9BY78 433 aaPredicted RBP23.73■■□□□ 1.39
TSSC4-203ENST00000380996 GPBP1L1Q9HC44 474 aaPredicted RBP23.73■■□□□ 1.39
TSSC4-203ENST00000380996 RBM27Q9P2N5 1060 aaKnown RBP23.73■■□□□ 1.39
TSSC4-203ENST00000380996 FRMD4AQ9P2Q2 1039 aaPredicted RBP23.73■■□□□ 1.39
TSSC4-203ENST00000380996 CCDC96Q2M329 555 aa23.72■■□□□ 1.39
TSSC4-203ENST00000380996 CHADLQ6NUI6 762 aa23.72■■□□□ 1.39
TSSC4-203ENST00000380996 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.72■■□□□ 1.39
TSSC4-203ENST00000380996 NBPF11Q86T75 865 aa23.72■■□□□ 1.39
TSSC4-203ENST00000380996 ANKRD13AQ8IZ07 590 aa23.72■■□□□ 1.39
TSSC4-203ENST00000380996 CMTR1Q8N1G2 835 aaKnown RBP23.72■■□□□ 1.39
TSSC4-203ENST00000380996 SRBD1Q8N5C6 995 aaKnown RBP23.72■■□□□ 1.39
TSSC4-203ENST00000380996 VCPKMTQ9H867 229 aa23.72■■□□□ 1.39
TSSC4-203ENST00000380996 PRPF3O43395 683 aaKnown RBP23.71■■□□□ 1.39
TSSC4-203ENST00000380996 DTNBO60941 627 aa23.71■■□□□ 1.39
TSSC4-203ENST00000380996 PPFIA3O75145 1194 aa23.71■■□□□ 1.39
TSSC4-203ENST00000380996 NDUFB10O96000 172 aa23.71■■□□□ 1.39
TSSC4-203ENST00000380996 GOLGA8HP0CJ92 632 aa23.71■■□□□ 1.39
TSSC4-203ENST00000380996 FDPSP14324 419 aaKnown RBP23.71■■□□□ 1.39
TSSC4-203ENST00000380996 FUT2Q10981 343 aa23.71■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms