RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 ATP2C1P98194 919 aaPredicted RBP16.51■□□□□ 0.23
MSH5-201ENST00000375703 DDB1Q16531 1140 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 ERFEQ4G0M1 354 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 SRBD1Q8N5C6 995 aaKnown RBP16.51■□□□□ 0.23
MSH5-201ENST00000375703 CTCFLQ8NI51 663 aaPredicted RBP16.51■□□□□ 0.23
MSH5-201ENST00000375703 BCL9LQ86UU0 1499 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 PBX1P40424 430 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 PLA2G4AP47712 749 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 NLRP5P59047 1200 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 RAD9BQ6WBX8 426 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 IQUBQ8NA54 791 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 ZNF384Q8TF68 577 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 IRX2Q9BZI1 471 aaPredicted RBP16.51■□□□□ 0.23
MSH5-201ENST00000375703 LZTFL1Q9NQ48 299 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 MINPP1Q9UNW1 487 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 ADGRG1Q9Y653 693 aa16.51■□□□□ 0.23
MSH5-201ENST00000375703 TEX35Q5T0J7 233 aa16.5■□□□□ 0.23
MSH5-201ENST00000375703 NHSL1Q5SYE7 1610 aa16.5■□□□□ 0.23
MSH5-201ENST00000375703 SEC31AO94979 1220 aaKnown RBP16.5■□□□□ 0.23
MSH5-201ENST00000375703 PIK3AP1Q6ZUJ8 805 aa16.5■□□□□ 0.23
MSH5-201ENST00000375703 C3orf67Q6ZVT6 689 aa16.5■□□□□ 0.23
MSH5-201ENST00000375703 BLZF1Q9H2G9 400 aa16.5■□□□□ 0.23
MSH5-201ENST00000375703 CTNND2Q9UQB3 1225 aa16.5■□□□□ 0.23
MSH5-201ENST00000375703 PLCH1Q4KWH8 1693 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 NMT2O60551 498 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 CASP14P31944 242 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 SF3B3Q15393 1217 aaKnown RBP16.49■□□□□ 0.23
MSH5-201ENST00000375703 FAM47AQ5JRC9 791 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 RRAGBQ5VZM2 374 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 RSRC2Q7L4I2 434 aaKnown RBP16.49■□□□□ 0.23
MSH5-201ENST00000375703 CNTNAP5Q8WYK1 1306 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 COL1A1P02452 1464 aaPredicted RBP16.49■□□□□ 0.23
MSH5-201ENST00000375703 ATP8B1O43520 1251 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 COBLO75128 1261 aa16.49■□□□□ 0.23
MSH5-201ENST00000375703 CDCA7Q9BWT1 371 aaPredicted RBP16.49■□□□□ 0.23
MSH5-201ENST00000375703 MFAP3LO75121 409 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 SCG2P13521 617 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 MCM7P33993 719 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 FAM193AP78312 1265 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 EVX2Q03828 476 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 NSUN4Q96CB9 384 aaKnown RBP16.48■□□□□ 0.23
MSH5-201ENST00000375703 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.48■□□□□ 0.23
MSH5-201ENST00000375703 MYH6P13533 1939 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 XDHP47989 1333 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 ORC4O43929 436 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 TRAPPC10P48553 1259 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 E2F4Q16254 413 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 CNGA4Q8IV77 575 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 RABGGTAQ92696 567 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 PYM1Q9BRP8 204 aaKnown RBP16.48■□□□□ 0.23
MSH5-201ENST00000375703 PARD6BQ9BYG5 372 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 MYH2Q9UKX2 1941 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 DUOX1Q9NRD9 1551 aa16.48■□□□□ 0.23
MSH5-201ENST00000375703 COL14A1Q05707 1796 aaKnown RBP16.48■□□□□ 0.23
MSH5-201ENST00000375703 N4BP3O15049 544 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 KIF5CO60282 957 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 CCT6AP40227 531 aaKnown RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 MECOMQ03112 1051 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 CLEC4GQ6UXB4 293 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 FBXO33Q7Z6M2 555 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 GOLGA1Q92805 767 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 CRNKL1Q9BZJ0 848 aaKnown RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 DCP1AQ9NPI6 582 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 VEGFAP15692 232 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 GTF2E1P29083 439 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 IL17AQ16552 155 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 CC2D1AQ6P1N0 951 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 RASGRP2Q7LDG7 609 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 CCDC51Q96ER9 411 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 COL4A1P02462 1669 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 A0A0U1RQJ8 604 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 LRRC10BA6NIK2 292 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 GTPBP6O43824 516 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 GYPCP04921 128 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 FXR1P51114 621 aaKnown RBP eCLIP16.47■□□□□ 0.23
MSH5-201ENST00000375703 KRT31Q15323 416 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 PFKFB3Q16875 520 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 PDXDC2PQ6P474 469 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 CREBRFQ8IUR6 639 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 MARCH10Q8NA82 808 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 ATRIPQ8WXE1 791 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 CELF1Q92879 486 aaKnown RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 CICQ96RK0 1608 aaPredicted RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 VPS16Q9H269 839 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 LIMA1Q9UHB6 759 aaKnown RBP16.47■□□□□ 0.23
MSH5-201ENST00000375703 RWDD2AQ9UIY3 292 aa16.47■□□□□ 0.23
MSH5-201ENST00000375703 ITIH6Q6UXX5 1313 aa16.46■□□□□ 0.23
MSH5-201ENST00000375703 MTRQ99707 1265 aa16.46■□□□□ 0.23
MSH5-201ENST00000375703 ATP8A2Q9NTI2 1148 aa16.46■□□□□ 0.23
MSH5-201ENST00000375703 TSPY2A6NKD2 308 aa16.46■□□□□ 0.22
MSH5-201ENST00000375703 ZNF569Q5MCW4 686 aa16.46■□□□□ 0.22
MSH5-201ENST00000375703 ARFGAP3Q9NP61 516 aa16.46■□□□□ 0.22
MSH5-201ENST00000375703 DOT1LQ8TEK3 1739 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 CACNA1SQ13698 1873 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 PHLPP1O60346 1717 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 ADAMTS3O15072 1205 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 TBC1D8O95759 1140 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 TXLNAP40222 546 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 PAK1Q13153 545 aa16.45■□□□□ 0.22
MSH5-201ENST00000375703 BICDL1Q6ZP65 573 aa16.45■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 187.8 ms