RNA–Protein interactions for RNA: ENST00000374038.7

RBM39-204, Transcript of RNA binding motif protein 39, humanhuman

TSL 5

Gene RBM39, Length 1,026 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-204ENST00000374038 SYNPO2Q9UMS6 1093 aa18.46■□□□□ 0.55
RBM39-204ENST00000374038 SNX14Q9Y5W7 946 aa18.46■□□□□ 0.55
RBM39-204ENST00000374038 CCDC178Q5BJE1 867 aa18.45■□□□□ 0.54
RBM39-204ENST00000374038 LPAR1Q92633 364 aa18.45■□□□□ 0.54
RBM39-204ENST00000374038 ZSCAN10Q96SZ4 725 aaPredicted RBP18.45■□□□□ 0.54
RBM39-204ENST00000374038 GOPCQ9HD26 462 aa18.45■□□□□ 0.54
RBM39-204ENST00000374038 ZCCHC17Q9NP64 241 aaKnown RBP18.45■□□□□ 0.54
RBM39-204ENST00000374038 TNKSO95271 1327 aa18.45■□□□□ 0.54
RBM39-204ENST00000374038 PDHXO00330 501 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 ALDH1A1P00352 501 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 VCAM1P19320 739 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 ADCK5Q3MIX3 580 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 KIAA1755Q5JYT7 1200 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 RCSD1Q6JBY9 416 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 CHST3Q7LGC8 479 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 ENAHQ8N8S7 591 aaPredicted RBP18.44■□□□□ 0.54
RBM39-204ENST00000374038 TTC14Q96N46 770 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 NEK1Q96PY6 1258 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 BEGAINQ9BUH8 593 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 WBP1LQ9NX94 342 aa18.44■□□□□ 0.54
RBM39-204ENST00000374038 F5H6K3 240 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 RAD21O60216 631 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 NDUFB10O96000 172 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 TOP1P11387 765 aaKnown RBP18.43■□□□□ 0.54
RBM39-204ENST00000374038 MCM5P33992 734 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 ANTXR2P58335 489 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 KLRC3Q07444 240 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 PABPC4Q13310 644 aaKnown RBP eCLIP18.43■□□□□ 0.54
RBM39-204ENST00000374038 COL9A3Q14050 684 aaPredicted RBP18.43■□□□□ 0.54
RBM39-204ENST00000374038 DGKHQ86XP1 1220 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 SPICE1Q8N0Z3 855 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 GMCL1P1Q8NEA9 526 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 TMEM47Q9BQJ4 181 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 RNF186Q9NXI6 227 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 SLC45A1Q9Y2W3 748 aa18.43■□□□□ 0.54
RBM39-204ENST00000374038 IFIT3O14879 490 aaKnown RBP18.42■□□□□ 0.54
RBM39-204ENST00000374038 PRC1O43663 620 aa18.42■□□□□ 0.54
RBM39-204ENST00000374038 SART3Q15020 963 aaKnown RBP18.42■□□□□ 0.54
RBM39-204ENST00000374038 TAF1CQ15572 869 aaPredicted RBP18.42■□□□□ 0.54
RBM39-204ENST00000374038 ANKS1AQ92625 1134 aa18.42■□□□□ 0.54
RBM39-204ENST00000374038 JAKMIP1Q96N16 626 aaKnown RBP18.42■□□□□ 0.54
RBM39-204ENST00000374038 RPAP3Q9H6T3 665 aaPredicted RBP18.42■□□□□ 0.54
RBM39-204ENST00000374038 SAGE1Q9NXZ1 904 aa18.42■□□□□ 0.54
RBM39-204ENST00000374038 ERICH2A1L162 156 aa18.41■□□□□ 0.54
RBM39-204ENST00000374038 WDR46O15213 610 aaKnown RBP18.41■□□□□ 0.54
RBM39-204ENST00000374038 CA12O43570 354 aa18.41■□□□□ 0.54
RBM39-204ENST00000374038 TRPA1O75762 1119 aa18.41■□□□□ 0.54
RBM39-204ENST00000374038 HOXA7P31268 230 aaPredicted RBP18.41■□□□□ 0.54
RBM39-204ENST00000374038 SEC23AQ15436 765 aa18.41■□□□□ 0.54
RBM39-204ENST00000374038 IFIT1BQ5T764 474 aaKnown RBP18.41■□□□□ 0.54
RBM39-204ENST00000374038 PARK7Q99497 189 aaKnown RBP18.41■□□□□ 0.54
RBM39-204ENST00000374038 PNMA3Q9UL41 463 aa18.41■□□□□ 0.54
RBM39-204ENST00000374038 USP17L15C9J2P7 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L13C9JLJ4 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L11C9JVI0 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L18D6R9N7 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L22D6RA61 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L17D6RBQ6 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L19D6RCP7 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L20D6RJB6 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 HMGB1P09429 215 aaKnown RBP18.4■□□□□ 0.54
RBM39-204ENST00000374038 OSBPP22059 807 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 IRX3P78415 501 aaPredicted RBP18.4■□□□□ 0.54
RBM39-204ENST00000374038 USP17L24Q0WX57 530 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 CRHR2Q13324 411 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 WTAPQ15007 396 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 TMEM67Q5HYA8 995 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 SLFN13Q68D06 897 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 DHX32Q7L7V1 743 aaKnown RBP18.4■□□□□ 0.54
RBM39-204ENST00000374038 TMEM87BQ96K49 555 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 MTA3Q9BTC8 594 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 ASCC2Q9H1I8 757 aaPredicted RBP18.4■□□□□ 0.54
RBM39-204ENST00000374038 KAT14Q9H8E8 782 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 ZFYVE28Q9HCC9 887 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 WDR19Q8NEZ3 1342 aa18.4■□□□□ 0.54
RBM39-204ENST00000374038 HSPA1AP0DMV8 641 aaKnown RBP18.39■□□□□ 0.53
RBM39-204ENST00000374038 HSPA1BP0DMV9 641 aaKnown RBP18.39■□□□□ 0.53
RBM39-204ENST00000374038 CYP2C8P10632 490 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 PSMA5P28066 241 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 ANAPC15P60006 121 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 FAM83BQ5T0W9 1011 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 BLOC1S2Q6QNY1 142 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 CATSPERGQ6ZRH7 1159 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 PNMA1Q8ND90 353 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 IGDCC4Q8TDY8 1250 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 NUP88Q99567 741 aaPredicted RBP18.39■□□□□ 0.53
RBM39-204ENST00000374038 CFHR5Q9BXR6 569 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 TANGO6Q9C0B7 1094 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 MTMR7Q9Y216 660 aa18.39■□□□□ 0.53
RBM39-204ENST00000374038 SH2B2O14492 632 aaPredicted RBP18.38■□□□□ 0.53
RBM39-204ENST00000374038 TBC1D8O95759 1140 aa18.38■□□□□ 0.53
RBM39-204ENST00000374038 CPA1P15085 419 aa18.38■□□□□ 0.53
RBM39-204ENST00000374038 CASTP20810 708 aaKnown RBP18.38■□□□□ 0.53
RBM39-204ENST00000374038 EXOSC10Q01780 885 aaKnown RBP18.38■□□□□ 0.53
RBM39-204ENST00000374038 RASGRP2Q7LDG7 609 aa18.38■□□□□ 0.53
RBM39-204ENST00000374038 CHMP4CQ96CF2 233 aa18.38■□□□□ 0.53
RBM39-204ENST00000374038 GMCL1Q96IK5 515 aa18.38■□□□□ 0.53
RBM39-204ENST00000374038 TCEANC2Q96MN5 208 aa18.38■□□□□ 0.53
RBM39-204ENST00000374038 LRRC2Q9BYS8 371 aa18.38■□□□□ 0.53
RBM39-204ENST00000374038 LY9Q9HBG7 655 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms