RNA–Protein interactions for RNA: ENST00000373779.7

PTPRU-202, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-202ENST00000373779 CTNNA2P26232 953 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 DNM2P50570 870 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 MRPL12P52815 198 aaKnown RBP19.42■□□□□ 0.7
PTPRU-202ENST00000373779 RNASE9P60153 205 aaKnown RBP19.42■□□□□ 0.7
PTPRU-202ENST00000373779 HPDP32754 393 aaPredicted RBP19.42■□□□□ 0.7
PTPRU-202ENST00000373779 DYMQ7RTS9 669 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 BLIDQ8IZY5 108 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 NRXN1Q9ULB1 1477 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 ATP1A3P13637 1013 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 PPP4R3AQ6IN85 833 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 SNX29Q8TEQ0 813 aa19.42■□□□□ 0.7
PTPRU-202ENST00000373779 USP17L12C9JPN9 530 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 USP17L21D6R901 530 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 RPN1P04843 607 aaKnown RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 COPB1P53618 953 aaKnown RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 CFAP221Q4G0U5 840 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 FAM207AQ9NSI2 230 aaPredicted RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 TFAP4Q01664 338 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 RBL2Q08999 1139 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 PAK2Q13177 524 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 PTGDRQ13258 359 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 TRIM58Q8NG06 486 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 PDE11AQ9HCR9 933 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 RFX7Q2KHR2 1363 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 BCAMP50895 628 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 ARPP21Q9UBL0 812 aaPredicted RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 USP42Q9H9J4 1324 aaKnown RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 NEXMIFQ5QGS0 1516 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 MMP1P03956 469 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 POTEDQ86YR6 584 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 C2CD5Q86YS7 1000 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 GPIHBP1Q8IV16 184 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 ENOX1Q8TC92 643 aaKnown RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 GPCPD1Q9NPB8 672 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 ANKARQ7Z5J8 1434 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 MAP3K15Q6ZN16 1313 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 SCG2P13521 617 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 SLC35F6Q8N357 371 aa19.41■□□□□ 0.7
PTPRU-202ENST00000373779 GPHNQ9NQX3 736 aaPredicted RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 EPN1Q9Y6I3 576 aaPredicted RBP19.41■□□□□ 0.7
PTPRU-202ENST00000373779 TLDC2A0PJX2 215 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 SMIM23A6NLE4 172 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 TFCP2L1Q9NZI6 479 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 MTRF1LQ9UGC7 380 aaKnown RBP19.4■□□□□ 0.7
PTPRU-202ENST00000373779 DDAH1O94760 285 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 EPB41P11171 864 aaKnown RBP19.4■□□□□ 0.7
PTPRU-202ENST00000373779 INPP5BP32019 993 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 RRAGAQ7L523 313 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 DDX12PQ92771 950 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 RABEP2Q9H5N1 569 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 ADGRL3Q9HAR2 1447 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 UTP18Q9Y5J1 556 aaKnown RBP eCLIP19.4■□□□□ 0.7
PTPRU-202ENST00000373779 A0A1W2PRG0 241 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 LONRF2Q1L5Z9 754 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 PI16Q6UXB8 463 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 GRAMD1CQ8IYS0 662 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 FAM71BQ8TC56 605 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 MED4Q9NPJ6 270 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 ERBB3P21860 1342 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 CETN3O15182 167 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 CALCRLQ16602 461 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 GOLGA5Q8TBA6 731 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 AIFM3Q96NN9 605 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 RNF26Q9BY78 433 aaPredicted RBP19.4■□□□□ 0.7
PTPRU-202ENST00000373779 KCNF1Q9H3M0 494 aa19.4■□□□□ 0.7
PTPRU-202ENST00000373779 FMR1NBQ8N0W7 255 aaPredicted RBP19.39■□□□□ 0.7
PTPRU-202ENST00000373779 DDX41Q9UJV9 622 aaKnown RBP19.39■□□□□ 0.69
PTPRU-202ENST00000373779 ERCC3P19447 782 aa19.39■□□□□ 0.69
PTPRU-202ENST00000373779 FMNL3Q8IVF7 1028 aa19.39■□□□□ 0.69
PTPRU-202ENST00000373779 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.39■□□□□ 0.69
PTPRU-202ENST00000373779 BPIFA3Q9BQP9 254 aa19.39■□□□□ 0.69
PTPRU-202ENST00000373779 ADCY7P51828 1080 aa19.39■□□□□ 0.69
PTPRU-202ENST00000373779 USP37Q86T82 979 aa19.39■□□□□ 0.69
PTPRU-202ENST00000373779 DLC1Q96QB1 1528 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 SFMBT2Q5VUG0 894 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 WDR66Q8TBY9 1149 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 CCDC77Q9BR77 488 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 MYO1AQ9UBC5 1043 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 LONP1P36776 959 aaKnown RBP19.38■□□□□ 0.69
PTPRU-202ENST00000373779 CEP57Q86XR8 500 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 LRRC45Q96CN5 670 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 SAMSN1Q9NSI8 373 aaKnown RBP19.38■□□□□ 0.69
PTPRU-202ENST00000373779 RTCBQ9Y3I0 505 aaKnown RBP19.38■□□□□ 0.69
PTPRU-202ENST00000373779 IFNAR1P17181 557 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 OSBPL5Q9H0X9 879 aaPredicted RBP19.38■□□□□ 0.69
PTPRU-202ENST00000373779 NUCKS1Q9H1E3 243 aaKnown RBP19.38■□□□□ 0.69
PTPRU-202ENST00000373779 TSGA10IPQ3SY00 556 aa19.38■□□□□ 0.69
PTPRU-202ENST00000373779 ZNF219Q9P2Y4 722 aaPredicted RBP19.38■□□□□ 0.69
PTPRU-202ENST00000373779 SLFNL1Q499Z3 407 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 H7C1W4 665 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 HAUS3Q68CZ6 603 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 NAP1L3Q99457 506 aaPredicted RBP19.37■□□□□ 0.69
PTPRU-202ENST00000373779 SOWAHDA6NJG2 315 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 KLHL30Q0D2K2 578 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 DHX40Q8IX18 779 aaKnown RBP19.37■□□□□ 0.69
PTPRU-202ENST00000373779 KLHL7Q8IXQ5 586 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 SAMD15Q9P1V8 674 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 PXDNLA1KZ92 1463 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 USP27XA6NNY8 438 aa19.37■□□□□ 0.69
PTPRU-202ENST00000373779 SLFN14P0C7P3 912 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms