RNA–Protein interactions for RNA: ENST00000372459.6

CTSA-203, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,972 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-203ENST00000372459 CEP95Q96GE4 821 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 LZTS2Q9BRK4 669 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 CEP131Q9UPN4 1083 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 MYO3BQ8WXR4 1341 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 CUTAO60888 179 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 SERPINA10Q9UK55 444 aa28.73■■■□□ 2.19
CTSA-203ENST00000372459 PALM3A6NDB9 673 aaPredicted RBP28.72■■■□□ 2.19
CTSA-203ENST00000372459 RBM5P52756 815 aaKnown RBP eCLIP28.72■■■□□ 2.191e-13■■■□□ 18.6
CTSA-203ENST00000372459 PFKFB1P16118 471 aa28.71■■■□□ 2.19
CTSA-203ENST00000372459 NLRP5P59047 1200 aa28.71■■■□□ 2.19
CTSA-203ENST00000372459 NFIAQ12857 509 aa28.71■■■□□ 2.19
CTSA-203ENST00000372459 KRI1Q8N9T8 703 aaKnown RBP28.71■■■□□ 2.19
CTSA-203ENST00000372459 PIBF1Q8WXW3 757 aa28.71■■■□□ 2.19
CTSA-203ENST00000372459 SDF4Q9BRK5 362 aa28.71■■■□□ 2.19
CTSA-203ENST00000372459 SH3GLB2Q9NR46 395 aa28.71■■■□□ 2.19
CTSA-203ENST00000372459 MTMR7Q9Y216 660 aa28.71■■■□□ 2.19
CTSA-203ENST00000372459 MYH8P13535 1937 aa28.7■■■□□ 2.19
CTSA-203ENST00000372459 ANO6Q4KMQ2 910 aa28.7■■■□□ 2.19
CTSA-203ENST00000372459 ZSCAN30Q86W11 494 aa28.7■■■□□ 2.19
CTSA-203ENST00000372459 ZNF202O95125 648 aa28.7■■■□□ 2.18
CTSA-203ENST00000372459 CAVIN2O95810 425 aa28.7■■■□□ 2.18
CTSA-203ENST00000372459 NPY5RQ15761 445 aa28.7■■■□□ 2.18
CTSA-203ENST00000372459 PSMD1Q99460 953 aa28.7■■■□□ 2.18
CTSA-203ENST00000372459 NOL7Q9UMY1 257 aaKnown RBP28.7■■■□□ 2.18
CTSA-203ENST00000372459 PCDHB6Q9Y5E3 794 aa28.7■■■□□ 2.18
CTSA-203ENST00000372459 BAZ2BQ9UIF8 2168 aaKnown RBP28.69■■■□□ 2.18
CTSA-203ENST00000372459 PARP1P09874 1014 aaKnown RBP28.69■■■□□ 2.18
CTSA-203ENST00000372459 DPEP1P16444 411 aa28.69■■■□□ 2.18
CTSA-203ENST00000372459 RESP18Q5W5W9 173 aa28.69■■■□□ 2.18
CTSA-203ENST00000372459 SHC4Q6S5L8 630 aa28.69■■■□□ 2.18
CTSA-203ENST00000372459 TNFRSF25Q93038 417 aa28.69■■■□□ 2.18
CTSA-203ENST00000372459 IDI2Q9BXS1 227 aa28.69■■■□□ 2.18
CTSA-203ENST00000372459 EHD4Q9H223 541 aa28.69■■■□□ 2.18
CTSA-203ENST00000372459 FAM237AA0A1B0GTK4 181 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 AKR1B1P15121 316 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 CALML3P27482 149 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 DHX36Q9H2U1 1008 aaKnown RBP28.68■■■□□ 2.18
CTSA-203ENST00000372459 MTMR4Q9NYA4 1195 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 HPSEQ9Y251 543 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 YDJCA8MPS7 323 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 KCNA3P22001 575 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 CLIC6Q96NY7 704 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 PCDHAC2Q9Y5I4 1007 aa28.68■■■□□ 2.18
CTSA-203ENST00000372459 TRIM75PA6NK02 468 aa28.67■■■□□ 2.18
CTSA-203ENST00000372459 KLRF2D3W0D1 207 aa28.67■■■□□ 2.18
CTSA-203ENST00000372459 SYKP43405 635 aa28.67■■■□□ 2.18
CTSA-203ENST00000372459 TIGD1Q96MW7 591 aa28.67■■■□□ 2.18
CTSA-203ENST00000372459 SPZ1Q9BXG8 430 aa28.67■■■□□ 2.18
CTSA-203ENST00000372459 USP25Q9UHP3 1055 aa28.67■■■□□ 2.18
CTSA-203ENST00000372459 MORC2Q9Y6X9 1032 aaPredicted RBP28.67■■■□□ 2.18
CTSA-203ENST00000372459 IGKV6D-41A0A0C4DH26 115 aa28.66■■■□□ 2.18
CTSA-203ENST00000372459 NPM3O75607 178 aaKnown RBP28.66■■■□□ 2.18
CTSA-203ENST00000372459 ATP2B1P20020 1258 aa28.66■■■□□ 2.18
CTSA-203ENST00000372459 SHMT1P34896 483 aa28.66■■■□□ 2.18
CTSA-203ENST00000372459 STX1AQ16623 288 aa28.66■■■□□ 2.18
CTSA-203ENST00000372459 EARS2Q5JPH6 523 aaKnown RBP28.66■■■□□ 2.18
CTSA-203ENST00000372459 CYTH3O43739 400 aa28.66■■■□□ 2.18
CTSA-203ENST00000372459 VEGFAP15692 232 aaPredicted RBP28.66■■■□□ 2.18
CTSA-203ENST00000372459 PTPREP23469 700 aa28.66■■■□□ 2.18
CTSA-203ENST00000372459 KIF13BQ9NQT8 1826 aa28.65■■■□□ 2.18
CTSA-203ENST00000372459 FAM205CA6NFA0 338 aa28.65■■■□□ 2.18
CTSA-203ENST00000372459 BMP15O95972 392 aa28.65■■■□□ 2.18
CTSA-203ENST00000372459 GOLGA8HP0CJ92 632 aa28.65■■■□□ 2.18
CTSA-203ENST00000372459 SMARCA1P28370 1054 aa28.65■■■□□ 2.18
CTSA-203ENST00000372459 FBXO2Q9UK22 296 aaPredicted RBP28.65■■■□□ 2.18
CTSA-203ENST00000372459 SLC35G1Q2M3R5 365 aa28.64■■■□□ 2.18
CTSA-203ENST00000372459 ZFPM1Q8IX07 1006 aa28.64■■■□□ 2.18
CTSA-203ENST00000372459 FAM177A1Q8N128 213 aaPredicted RBP28.64■■■□□ 2.18
CTSA-203ENST00000372459 CCDC148Q8NFR7 591 aa28.64■■■□□ 2.18
CTSA-203ENST00000372459 CBX8Q9HC52 389 aa28.64■■■□□ 2.18
CTSA-203ENST00000372459 PSME4Q14997 1843 aa28.64■■■□□ 2.18
CTSA-203ENST00000372459 CACNB3P54284 484 aa28.64■■■□□ 2.17
CTSA-203ENST00000372459 USP17L2Q6R6M4 530 aa28.64■■■□□ 2.17
CTSA-203ENST00000372459 CCDC125Q86Z20 511 aa28.64■■■□□ 2.17
CTSA-203ENST00000372459 GPKOWQ92917 476 aaPredicted RBP eCLIP28.64■■■□□ 2.17
CTSA-203ENST00000372459 DNAJC25Q9H1X3 360 aa28.64■■■□□ 2.17
CTSA-203ENST00000372459 FAM198AQ9UFP1 575 aa28.64■■■□□ 2.17
CTSA-203ENST00000372459 SRPRBQ9Y5M8 271 aaKnown RBP28.64■■■□□ 2.17
CTSA-203ENST00000372459 TTLL1O95922 423 aa28.63■■■□□ 2.17
CTSA-203ENST00000372459 ZNF165P49910 485 aa28.63■■■□□ 2.17
CTSA-203ENST00000372459 TCP10Q12799 353 aa28.63■■■□□ 2.17
CTSA-203ENST00000372459 ZNF579Q8NAF0 562 aaKnown RBP28.63■■■□□ 2.17
CTSA-203ENST00000372459 CCDC17Q96LX7 622 aa28.63■■■□□ 2.17
CTSA-203ENST00000372459 NAP1L5Q96NT1 182 aaPredicted RBP28.63■■■□□ 2.17
CTSA-203ENST00000372459 PI4KBQ9UBF8 816 aa28.63■■■□□ 2.17
CTSA-203ENST00000372459 CFAP100Q494V2 611 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 PPP4R3BQ5MIZ7 849 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 SOGA3Q5TF21 947 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 BLIDQ8IZY5 108 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 LARGE2Q8N3Y3 721 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 VPS33BQ9H267 617 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 ANO10Q9NW15 660 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 KIAA1468Q9P260 1216 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 PCDHA4Q9UN74 947 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 TRAPPC10P48553 1259 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 WWC2Q6AWC2 1192 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 GALNT17Q6IS24 598 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 BARHL2Q9NY43 387 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 FAM13BQ9NYF5 915 aa28.62■■■□□ 2.17
CTSA-203ENST00000372459 PDHBP11177 359 aa28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms