RNA–Protein interactions for RNA: ENST00000372146.4

GTF3C4-201, Transcript of general transcription factor IIIC subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GTF3C4, Length 9,043 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C4-201ENST00000372146 BZW2Q9Y6E2 419 aaKnown RBP16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 HLA-DPA1P20036 260 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 MCMDC2Q4G0Z9 681 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 MMS22LQ6ZRQ5 1243 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 TADA3O75528 432 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 ZNF449Q6P9G9 518 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 MAP3K2Q9Y2U5 619 aa16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 CARSP49589 748 aaKnown RBP16.8■□□□□ 0.28
GTF3C4-201ENST00000372146 MAGEA9P43362 315 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 C2CD5Q86YS7 1000 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 NUTM2BA6NNL0 878 aaPredicted RBP16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 NUTM2EB1AL46 878 aaPredicted RBP16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 MSH2P43246 934 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 RNASELQ05823 741 aaKnown RBP16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 PACSIN2Q9UNF0 486 aaPredicted RBP16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 PSMD2Q13200 908 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 SPZ1Q9BXG8 430 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 TRPC5Q9UL62 973 aaPredicted RBP16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 ECE1P42892 770 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 ATL3Q6DD88 541 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 OGFOD1Q8N543 542 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 ZNF215Q9UL58 517 aaPredicted RBP16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 BCRP11274 1271 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 NSMCE1Q8WV22 266 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 HINFPQ9BQA5 517 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 IFNB1P01574 187 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 UIMC1Q96RL1 719 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 CABP5Q9NP86 173 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 CCDC141Q6ZP82 1450 aa16.79■□□□□ 0.28
GTF3C4-201ENST00000372146 HARSP12081 509 aaKnown RBP16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 PDE4DQ08499 809 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 ART3Q13508 389 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 MCF2LO15068 1137 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 TMCO5AQ8N6Q1 288 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 DESI2Q9BSY9 194 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 PSMD7P51665 324 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 PTPROQ16827 1216 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 ENOX1Q8TC92 643 aaKnown RBP16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 SEC31AO94979 1220 aaKnown RBP16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 PPP1R42Q7Z4L9 355 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 ADAT2Q7Z6V5 191 aaKnown RBP16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 SH3GL2Q99962 352 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 GDAP1Q8TB36 358 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 TRAIPQ9BWF2 469 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 ACTR5Q9H9F9 607 aaPredicted RBP16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 CABP1Q9NZU7 370 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 POLKQ9UBT6 870 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 WARS2Q9UGM6 360 aaKnown RBP16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 PTPDC1A2A3K4 754 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 H0YC42 278 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 PDE6AP16499 860 aa16.78■□□□□ 0.28
GTF3C4-201ENST00000372146 CCDC169A6NNP5 214 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 TRPC1P48995 793 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 C8orf34Q49A92 452 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 MAIP1Q8WWC4 291 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 KRT81Q14533 505 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 DIABLOQ9NR28 239 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 WWC3Q9ULE0 1092 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 SLC4A4Q9Y6R1 1079 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 PYGLP06737 847 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 SMTNP53814 917 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 TSPY1Q01534 308 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 KLHL30Q0D2K2 578 aa16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 INTS4Q96HW7 963 aaKnown RBP16.77■□□□□ 0.28
GTF3C4-201ENST00000372146 TNNI2P48788 182 aa16.77■□□□□ 0.27
GTF3C4-201ENST00000372146 SLC12A1Q13621 1099 aa16.77■□□□□ 0.27
GTF3C4-201ENST00000372146 CHMP6Q96FZ7 201 aa16.77■□□□□ 0.27
GTF3C4-201ENST00000372146 PPP1R2P41236 205 aa16.77■□□□□ 0.27
GTF3C4-201ENST00000372146 NELFBQ8WX92 580 aa16.77■□□□□ 0.27
GTF3C4-201ENST00000372146 KCNH3Q9ULD8 1083 aa16.77■□□□□ 0.27
GTF3C4-201ENST00000372146 DACH2Q96NX9 599 aa16.77■□□□□ 0.27
GTF3C4-201ENST00000372146 NLRP12P59046 1061 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 MAML1Q92585 1016 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 GUCY2DQ02846 1103 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 CD2APQ9Y5K6 639 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 RXRAP19793 462 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 TMED10P49755 219 aaKnown RBP16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 GNAQP50148 359 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 TRAF7Q6Q0C0 670 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 RAPH1Q70E73 1250 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 SKA2Q8WVK7 121 aaPredicted RBP16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 IQCDQ96DY2 449 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 CAMSAP2Q08AD1 1489 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 ATF7P17544 494 aaPredicted RBP16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 PPP2R5EQ16537 467 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 CAPRIN2Q6IMN6 1127 aaKnown RBP16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 ZNF202O95125 648 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 CTNND1O60716 968 aaKnown RBP16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 KRT4P19013 534 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 ING2Q9H160 280 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 DPH5Q9H2P9 285 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 BUB1O43683 1085 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 CACTINQ8WUQ7 758 aaKnown RBP16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 VTI1AQ96AJ9 217 aa16.76■□□□□ 0.27
GTF3C4-201ENST00000372146 GRIN2BQ13224 1484 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 POC1B-GALNT4F8VUJ3 575 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 ZNF445P59923 1031 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 ZNF174Q15697 407 aa16.75■□□□□ 0.27
GTF3C4-201ENST00000372146 TRMT112Q9UI30 125 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 182.6 ms