RNA–Protein interactions for RNA: ENST00000368020.5

USF1-202, Transcript of upstream transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USF1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-202ENST00000368020 KAT14Q9H8E8 782 aa16.07■□□□□ 0.16
USF1-202ENST00000368020 KCNJ14Q9UNX9 436 aa16.07■□□□□ 0.16
USF1-202ENST00000368020 SRPRBQ9Y5M8 271 aaKnown RBP16.07■□□□□ 0.16
USF1-202ENST00000368020 DDX60LQ5H9U9 1706 aaKnown RBP16.07■□□□□ 0.16
USF1-202ENST00000368020 LTBP3Q9NS15 1303 aa16.07■□□□□ 0.16
USF1-202ENST00000368020 FOCADQ5VW36 1801 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 TRIM75PA6NK02 468 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 CALML3P27482 149 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 TOB1P50616 345 aaPredicted RBP16.06■□□□□ 0.16
USF1-202ENST00000368020 PKN1Q16512 942 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 KRBA2Q6ZNG9 492 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 CCDC82Q8N4S0 544 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 FERMT2Q96AC1 680 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 FAM163AQ96GL9 167 aaPredicted RBP16.06■□□□□ 0.16
USF1-202ENST00000368020 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 SUGT1Q9Y2Z0 365 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 CNTNAP5Q8WYK1 1306 aa16.06■□□□□ 0.16
USF1-202ENST00000368020 AOPEPQ8N6M6 819 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 CNNM3Q8NE01 707 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 KIAA1524Q8TCG1 905 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 GPR101Q96P66 508 aaPredicted RBP16.05■□□□□ 0.16
USF1-202ENST00000368020 PYM1Q9BRP8 204 aaKnown RBP16.05■□□□□ 0.16
USF1-202ENST00000368020 FBXO2Q9UK22 296 aaPredicted RBP16.05■□□□□ 0.16
USF1-202ENST00000368020 V9GY48 417 aaPredicted RBP16.05■□□□□ 0.16
USF1-202ENST00000368020 GSDMDP57764 484 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 LZTS2Q9BRK4 669 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 TAOK3Q9H2K8 898 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 MKNK2Q9HBH9 465 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 IMPACTQ9P2X3 320 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 DACH1Q9UI36 760 aa16.05■□□□□ 0.16
USF1-202ENST00000368020 MYH1P12882 1939 aa16.04■□□□□ 0.16
USF1-202ENST00000368020 GPR75-ASB3A0A0A6YYF3 556 aa16.04■□□□□ 0.16
USF1-202ENST00000368020 PLEKHA8P1O95397 391 aa16.04■□□□□ 0.16
USF1-202ENST00000368020 SCG2P13521 617 aa16.04■□□□□ 0.16
USF1-202ENST00000368020 DPCR1Q3MIW9 517 aa16.04■□□□□ 0.16
USF1-202ENST00000368020 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
USF1-202ENST00000368020 CMTR1Q8N1G2 835 aaKnown RBP16.04■□□□□ 0.16
USF1-202ENST00000368020 TRIML1Q8N9V2 468 aa16.04■□□□□ 0.16
USF1-202ENST00000368020 CABP5Q9NP86 173 aa16.04■□□□□ 0.16
USF1-202ENST00000368020 UBE2Q2LH0YL09 131 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 RIMBP2O15034 1052 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 TSPY3P0CV98 308 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 TSPY8P0CW00 308 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 NR5A1Q13285 461 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 PFKFB3Q16875 520 aaPredicted RBP16.03■□□□□ 0.16
USF1-202ENST00000368020 DNTTIP2Q5QJE6 756 aaKnown RBP16.03■□□□□ 0.16
USF1-202ENST00000368020 GALNT17Q6IS24 598 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 CCDC186Q7Z3E2 898 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 SH3RF3Q8TEJ3 882 aaPredicted RBP16.03■□□□□ 0.16
USF1-202ENST00000368020 PRIMPOLQ96LW4 560 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 VPS54Q9P1Q0 977 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 FAM205AQ6ZU69 1335 aa16.03■□□□□ 0.16
USF1-202ENST00000368020 G3V3G9 751 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 PPIP5K2O43314 1243 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 USP17L8P0C7I0 530 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 PTGS1P23219 599 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 TFAP4Q01664 338 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 CT47A1Q5JQC4 288 aaPredicted RBP16.02■□□□□ 0.16
USF1-202ENST00000368020 FAM47AQ5JRC9 791 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 DCAF8Q5TAQ9 597 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 ZNF830Q96NB3 372 aaPredicted RBP16.02■□□□□ 0.16
USF1-202ENST00000368020 KCNF1Q9H3M0 494 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 TAOK2Q9UL54 1235 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 PCDHB6Q9Y5E3 794 aa16.02■□□□□ 0.16
USF1-202ENST00000368020 GAKO14976 1311 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 NFKBIEO00221 500 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 CYP2D6P10635 497 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 GRM4Q14833 912 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 AOC3Q16853 763 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 RCSD1Q6JBY9 416 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 SRBD1Q8N5C6 995 aaKnown RBP16.02■□□□□ 0.15
USF1-202ENST00000368020 PNMA1Q8ND90 353 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 CCDC148Q8NFR7 591 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 CLIC6Q96NY7 704 aa16.02■□□□□ 0.15
USF1-202ENST00000368020 SMIM22K7EJ46 135 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 CBFA2T2O43439 604 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 NRDCO43847 1150 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 BTDP43251 543 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 MYL5Q02045 173 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 POSTNQ15063 836 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 MFSD14BQ5SR56 506 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 NT5DC1Q5TFE4 455 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 OXER1Q8TDS5 423 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 TGFBRAP1Q8WUH2 860 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
USF1-202ENST00000368020 R3HCC1Q9Y3T6 440 aaKnown RBP16.01■□□□□ 0.15
USF1-202ENST00000368020 NLRP5P59047 1200 aa16■□□□□ 0.15
USF1-202ENST00000368020 DIXDC1Q155Q3 683 aa16■□□□□ 0.15
USF1-202ENST00000368020 C16orf86Q6ZW13 317 aa16■□□□□ 0.15
USF1-202ENST00000368020 METTL16Q86W50 562 aaKnown RBP16■□□□□ 0.15
USF1-202ENST00000368020 TEX11Q8IYF3 940 aa16■□□□□ 0.15
USF1-202ENST00000368020 LARGE2Q8N3Y3 721 aa16■□□□□ 0.15
USF1-202ENST00000368020 TNFRSF25Q93038 417 aa16■□□□□ 0.15
USF1-202ENST00000368020 ZNF277Q9NRM2 450 aaPredicted RBP16■□□□□ 0.15
USF1-202ENST00000368020 SRCAPQ6ZRS2 3230 aa16■□□□□ 0.15
USF1-202ENST00000368020 ECE2O60344 883 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 NMT2O60551 498 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 SMC2O95347 1197 aa15.99■□□□□ 0.15
USF1-202ENST00000368020 SMARCA1P28370 1054 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms