RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 ZKSCAN3Q9BRR0 538 aa22.58■■□□□ 1.21
HLA-DRB1-201ENST00000360004 TANGO6Q9C0B7 1094 aa22.58■■□□□ 1.21
HLA-DRB1-201ENST00000360004 VCPKMTQ9H867 229 aa22.58■■□□□ 1.21
HLA-DRB1-201ENST00000360004 SLC45A1Q9Y2W3 748 aa22.58■■□□□ 1.21
HLA-DRB1-201ENST00000360004 USP17L15C9J2P7 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L13C9JLJ4 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L11C9JVI0 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L18D6R9N7 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L22D6RA61 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L17D6RBQ6 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L19D6RCP7 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L20D6RJB6 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 NMT2O60551 498 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 VCAM1P19320 739 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 USP17L24Q0WX57 530 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 SAMD1Q6SPF0 538 aaPredicted RBP22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 C12orf42Q96LP6 360 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 RPAP3Q9H6T3 665 aaPredicted RBP22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 MTMR7Q9Y216 660 aa22.57■■□□□ 1.2
HLA-DRB1-201ENST00000360004 ERICH2A1L162 156 aa22.56■■□□□ 1.2
HLA-DRB1-201ENST00000360004 CYP2C8P10632 490 aa22.56■■□□□ 1.2
HLA-DRB1-201ENST00000360004 LBX1P52954 281 aa22.56■■□□□ 1.2
HLA-DRB1-201ENST00000360004 SART3Q15020 963 aaKnown RBP22.56■■□□□ 1.2
HLA-DRB1-201ENST00000360004 SIAH1Q8IUQ4 282 aa22.56■■□□□ 1.2
HLA-DRB1-201ENST00000360004 HSPA8P11142 646 aaKnown RBP22.55■■□□□ 1.2
HLA-DRB1-201ENST00000360004 NECTIN1Q15223 517 aa22.55■■□□□ 1.2
HLA-DRB1-201ENST00000360004 ASCC2Q9H1I8 757 aaPredicted RBP22.55■■□□□ 1.2
HLA-DRB1-201ENST00000360004 IL17RBQ9NRM6 502 aa22.55■■□□□ 1.2
HLA-DRB1-201ENST00000360004 TCP11L1Q9NUJ3 509 aa22.55■■□□□ 1.2
HLA-DRB1-201ENST00000360004 WDR46O15213 610 aaKnown RBP22.54■■□□□ 1.2
HLA-DRB1-201ENST00000360004 KRT32Q14532 448 aa22.54■■□□□ 1.2
HLA-DRB1-201ENST00000360004 CHMP4CQ96CF2 233 aa22.54■■□□□ 1.2
HLA-DRB1-201ENST00000360004 ZSCAN10Q96SZ4 725 aaPredicted RBP22.54■■□□□ 1.2
HLA-DRB1-201ENST00000360004 ZSWIM5Q9P217 1185 aa22.54■■□□□ 1.2
HLA-DRB1-201ENST00000360004 SYNPO2Q9UMS6 1093 aa22.54■■□□□ 1.2
HLA-DRB1-201ENST00000360004 PTPRFP10586 1907 aa22.54■■□□□ 1.2
HLA-DRB1-201ENST00000360004 LOC285556D6RIA3 1793 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 F5H6K3 240 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 GPR25O00155 361 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 TLR2O60603 784 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 TOP1P11387 765 aaKnown RBP22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 KLRC3Q07444 240 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 SLFN13Q68D06 897 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 MKL1Q969V6 931 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 TTC14Q96N46 770 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 CFHR5Q9BXR6 569 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 KAT14Q9H8E8 782 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 CPA4Q9UI42 421 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 TNKSO95271 1327 aa22.53■■□□□ 1.2
HLA-DRB1-201ENST00000360004 IFIT3O14879 490 aaKnown RBP22.52■■□□□ 1.2
HLA-DRB1-201ENST00000360004 NDUFB10O96000 172 aa22.52■■□□□ 1.2
HLA-DRB1-201ENST00000360004 HOXA7P31268 230 aaPredicted RBP22.52■■□□□ 1.2
HLA-DRB1-201ENST00000360004 IKQ13123 557 aaPredicted RBP22.52■■□□□ 1.2
HLA-DRB1-201ENST00000360004 STOX1Q6ZVD7 989 aa22.52■■□□□ 1.2
HLA-DRB1-201ENST00000360004 TAF6LQ9Y6J9 622 aa22.52■■□□□ 1.2
HLA-DRB1-201ENST00000360004 GREB1LQ9C091 1923 aaPredicted RBP22.52■■□□□ 1.2
HLA-DRB1-201ENST00000360004 FKTNO75072 461 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 FLOT1O75955 427 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 KIF22Q14807 665 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 CCDC96Q2M329 555 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 FAM83BQ5T0W9 1011 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 IFIT1BQ5T764 474 aaKnown RBP22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 CATSPERGQ6ZRH7 1159 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 DGKHQ86XP1 1220 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 GMCL1P1Q8NEA9 526 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 TMEM47Q9BQJ4 181 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 R3HDMLQ9H3Y0 253 aa22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 CTDP1Q9Y5B0 961 aaPredicted RBP22.51■■□□□ 1.19
HLA-DRB1-201ENST00000360004 EPB41L2O43491 1005 aaKnown RBP22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 MCM5P33992 734 aa22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 SLC1A4P43007 532 aa22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 GCLCP48506 637 aaPredicted RBP22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 HERVK_113P62684 666 aa22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 KIAA1755Q5JYT7 1200 aa22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 CYB5R4Q7L1T6 521 aa22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 GTF3C2Q8WUA4 911 aaPredicted RBP22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 NUP88Q99567 741 aaPredicted RBP22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 P2RX7Q99572 595 aaKnown RBP22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 PAGR1Q9BTK6 254 aa22.5■■□□□ 1.19
HLA-DRB1-201ENST00000360004 HSPA4P34932 840 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 SP3Q02447 781 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 WTAPQ15007 396 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 TMEM67Q5HYA8 995 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 CHST3Q7LGC8 479 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 CCAR1Q8IX12 1150 aaKnown RBP22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 ANKRD13CQ8N6S4 541 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 ZNF296Q8WUU4 475 aaPredicted RBP22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 NEK1Q96PY6 1258 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 CWC22Q9HCG8 908 aaKnown RBP22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 HOXC10Q9NYD6 342 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 MYH4Q9Y623 1939 aa22.49■■□□□ 1.19
HLA-DRB1-201ENST00000360004 PRC1O43663 620 aa22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 ECM2O94769 699 aaPredicted RBP22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 BMP3P12645 472 aa22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 FGD1P98174 961 aa22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 COG2Q14746 738 aa22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 ARHGEF6Q15052 776 aa22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 ENAHQ8N8S7 591 aaPredicted RBP22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 NKX2-3Q8TAU0 364 aa22.48■■□□□ 1.19
HLA-DRB1-201ENST00000360004 ERO1AQ96HE7 468 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms