RNA–Protein interactions for RNA: ENST00000354193.4

SVIP-201, Transcript of small VCP interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SVIP, Length 4,541 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-201ENST00000354193 RNF26Q9BY78 433 aaPredicted RBP12.69□□□□□ -0.38
SVIP-201ENST00000354193 TOP1P11387 765 aaKnown RBP12.69□□□□□ -0.38
SVIP-201ENST00000354193 CCDC173Q0VFZ6 552 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 RTKN2Q8IZC4 609 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 AOPEPQ8N6M6 819 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 PODXL2Q9NZ53 605 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 MAPK8IP1Q9UQF2 711 aa12.69□□□□□ -0.38
SVIP-201ENST00000354193 DDTLA6NHG4 134 aaPredicted RBP12.68□□□□□ -0.38
SVIP-201ENST00000354193 ABCB5Q2M3G0 1257 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 STRIP1Q5VSL9 837 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 GOLPH3LQ9H4A5 285 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 HOMER2Q9NSB8 354 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 TCHHQ07283 1943 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 NWD2Q9ULI1 1742 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 LMOD1P29536 600 aaPredicted RBP12.68□□□□□ -0.38
SVIP-201ENST00000354193 STX17P56962 302 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 SAMD7Q7Z3H4 446 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 IL17RBQ9NRM6 502 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.68□□□□□ -0.38
SVIP-201ENST00000354193 RCOR1Q9UKL0 485 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 KCNH3Q9ULD8 1083 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 SEC23AQ15436 765 aa12.68□□□□□ -0.38
SVIP-201ENST00000354193 NAT10Q9H0A0 1025 aaKnown RBP12.68□□□□□ -0.38
SVIP-201ENST00000354193 OSBPL5Q9H0X9 879 aaPredicted RBP12.68□□□□□ -0.38
SVIP-201ENST00000354193 CCNT1O60563 726 aaKnown RBP12.67□□□□□ -0.38
SVIP-201ENST00000354193 DDAH1O94760 285 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 PTGDRQ13258 359 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 PNOCQ13519 176 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 CIAPIN1Q6FI81 312 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 CCDC174Q6PII3 467 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 CLEC17AQ6ZS10 378 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 KIFC2Q96AC6 838 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 PI4KBQ9UBF8 816 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 TJP1Q07157 1748 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 ORC4O43929 436 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 SERPINC1P01008 464 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 RHBDL3P58872 404 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 RASSF7Q02833 373 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 NTRK3Q16288 839 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 CCDC178Q5BJE1 867 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 SLFN13Q68D06 897 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 STYK1Q6J9G0 422 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 TMEM39BQ9GZU3 492 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 C6orf50Q9HD87 102 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 NRAPQ86VF7 1730 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 TMEM232C9JQI7 657 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 WDHD1O75717 1129 aaPredicted RBP12.67□□□□□ -0.38
SVIP-201ENST00000354193 CALML3P27482 149 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 CASP1P29466 404 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 BLIDQ8IZY5 108 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 CLSTN2Q9H4D0 955 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 ANO10Q9NW15 660 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 PKD2L1Q9P0L9 805 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 COBLO75128 1261 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 TXKP42681 527 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 PPP4CP60510 307 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 ADALQ6DHV7 355 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 TTC12Q9H892 705 aaPredicted RBP12.67□□□□□ -0.38
SVIP-201ENST00000354193 RTEL1Q9NZ71 1219 aa12.67□□□□□ -0.38
SVIP-201ENST00000354193 RGL2O15211 777 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 TTLL1O95922 423 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 PTPN21Q16825 1174 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 EEF2KMTQ96G04 330 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 IDEP14735 1019 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 GRIN1Q05586 938 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 UBE2SQ16763 222 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 YEATS4O95619 227 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 PCP11498 1178 aaKnown RBP12.66□□□□□ -0.38
SVIP-201ENST00000354193 EEF2P13639 858 aaKnown RBP12.66□□□□□ -0.38
SVIP-201ENST00000354193 SBK1Q52WX2 424 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 WDR78Q5VTH9 848 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 APOBEC3HQ6NTF7 200 aaKnown RBP12.66□□□□□ -0.38
SVIP-201ENST00000354193 USP49Q70CQ1 688 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 CERS3Q8IU89 383 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 FAM200AQ8TCP9 573 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 EPSTI1Q96J88 318 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 FZD1Q9UP38 647 aa12.66□□□□□ -0.38
SVIP-201ENST00000354193 GOLGA6L6A8MZA4 724 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 TAL1P17542 331 aaPredicted RBP12.65□□□□□ -0.38
SVIP-201ENST00000354193 SLC39A14Q15043 492 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 CCDC12Q8WUD4 166 aaPredicted RBP12.65□□□□□ -0.38
SVIP-201ENST00000354193 SHTN1A0MZ66 631 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 FSD2A1L4K1 749 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 ESPNB1AK53 854 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 UBXN2AP68543 259 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 NBPF9Q3BBW0 867 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 BLZF1Q9H2G9 400 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 ZNF408Q9H9D4 720 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 SERTAD1Q9UHV2 236 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 ANAPC4Q9UJX5 808 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 NEDD1Q8NHV4 660 aa12.65□□□□□ -0.38
SVIP-201ENST00000354193 PRPF3O43395 683 aaKnown RBP12.65□□□□□ -0.39
SVIP-201ENST00000354193 CFBP00751 764 aa12.65□□□□□ -0.39
SVIP-201ENST00000354193 CXCL9Q07325 125 aa12.65□□□□□ -0.39
SVIP-201ENST00000354193 STX1AQ16623 288 aa12.65□□□□□ -0.39
SVIP-201ENST00000354193 NUP188Q5SRE5 1749 aa12.65□□□□□ -0.39
SVIP-201ENST00000354193 DACT2Q5SW24 774 aa12.65□□□□□ -0.39
SVIP-201ENST00000354193 IL17RAQ96F46 866 aa12.65□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms