RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 FAM47AQ5JRC9 791 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 TTC38Q5R3I4 469 aa20.23■□□□□ 0.83
IFFO1-201ENST00000336604 MRPL44Q9H9J2 332 aaKnown RBP20.23■□□□□ 0.83
IFFO1-201ENST00000336604 GOLGA6L9A6NEM1 432 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 BICDL1Q6ZP65 573 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 IGSF22Q8N9C0 903 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 CELF1Q92879 486 aaKnown RBP20.22■□□□□ 0.83
IFFO1-201ENST00000336604 BRMS1Q9HCU9 246 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 BSDC1Q9NW68 430 aaPredicted RBP20.22■□□□□ 0.83
IFFO1-201ENST00000336604 CALCOCO1Q9P1Z2 691 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 TAF1P21675 1872 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 EFCAB8A8MWE9 144 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 AKR1B15C9JRZ8 316 aaPredicted RBP20.22■□□□□ 0.83
IFFO1-201ENST00000336604 ADAMTS3O15072 1205 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 RBL2Q08999 1139 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 BMS1Q14692 1282 aaKnown RBP20.22■□□□□ 0.83
IFFO1-201ENST00000336604 BLZF1Q9H2G9 400 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 CNTNAP5Q8WYK1 1306 aa20.22■□□□□ 0.83
IFFO1-201ENST00000336604 PPP1R3GB7ZBB8 358 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 ADAMTS2O95450 1211 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 FGRP09769 529 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 SMIM5Q71RC9 77 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 KIFC2Q96AC6 838 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 GSDMAQ96QA5 445 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 ADD3Q9UEY8 706 aaKnown RBP20.21■□□□□ 0.83
IFFO1-201ENST00000336604 ZNF652Q9Y2D9 606 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 A0A0U1RQJ8 604 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 CALM1P0DP23 149 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 CALM2P0DP24 149 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 CALM3P0DP25 149 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 MAP3K9P80192 1104 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 SLC4A8Q2Y0W8 1093 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 CDKAL1Q5VV42 579 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 PIK3AP1Q6ZUJ8 805 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 ATRIPQ8WXE1 791 aa20.21■□□□□ 0.83
IFFO1-201ENST00000336604 PNMA6AP0CW24 399 aaPredicted RBP20.2■□□□□ 0.82
IFFO1-201ENST00000336604 KCNQ4P56696 695 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 MECOMQ03112 1051 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 PLCD3Q8N3E9 789 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 NSUN4Q96CB9 384 aaKnown RBP20.2■□□□□ 0.82
IFFO1-201ENST00000336604 LZTFL1Q9NQ48 299 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 KCNQ2O43526 872 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 DDAH1O94760 285 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 ATP2C1P98194 919 aaPredicted RBP20.2■□□□□ 0.82
IFFO1-201ENST00000336604 RAD9BQ6WBX8 426 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 CTCFLQ8NI51 663 aaPredicted RBP20.2■□□□□ 0.82
IFFO1-201ENST00000336604 MRFAP1Q9Y605 127 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 XDHP47989 1333 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 POLR3GO15318 223 aaPredicted RBP20.2■□□□□ 0.82
IFFO1-201ENST00000336604 BMP15O95972 392 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 CYP2D6P10635 497 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 MCM7P33993 719 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 PANX2Q96RD6 677 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 DCP1AQ9NPI6 582 aaPredicted RBP20.2■□□□□ 0.82
IFFO1-201ENST00000336604 CTNND2Q9UQB3 1225 aa20.2■□□□□ 0.82
IFFO1-201ENST00000336604 SEC31AO94979 1220 aaKnown RBP20.19■□□□□ 0.82
IFFO1-201ENST00000336604 CAPN2P17655 700 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 PBX1P40424 430 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 SF3B3Q15393 1217 aaKnown RBP20.19■□□□□ 0.82
IFFO1-201ENST00000336604 TMCO3Q6UWJ1 677 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 PPFIBP1Q86W92 1011 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 ARGLU1Q9NWB6 273 aaPredicted RBP20.19■□□□□ 0.82
IFFO1-201ENST00000336604 JAG2Q9Y219 1238 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.19■□□□□ 0.82
IFFO1-201ENST00000336604 SPATA31A1Q5TZJ5 1347 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 ZRANB2O95218 330 aaKnown RBP eCLIP20.19■□□□□ 0.82
IFFO1-201ENST00000336604 CCDC175P0C221 793 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 CCT6AP40227 531 aaKnown RBP20.19■□□□□ 0.82
IFFO1-201ENST00000336604 HNRNPH2P55795 449 aaKnown RBP20.19■□□□□ 0.82
IFFO1-201ENST00000336604 NLRP5P59047 1200 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 IL17AQ16552 155 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 MTRQ99707 1265 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 TFCP2L1Q9NZI6 479 aa20.19■□□□□ 0.82
IFFO1-201ENST00000336604 COL16A1Q07092 1604 aaPredicted RBP20.18■□□□□ 0.82
IFFO1-201ENST00000336604 PRDX5P30044 214 aa20.18■□□□□ 0.82
IFFO1-201ENST00000336604 PPP2R3AQ06190 1150 aa20.18■□□□□ 0.82
IFFO1-201ENST00000336604 E2F4Q16254 413 aa20.18■□□□□ 0.82
IFFO1-201ENST00000336604 CCDC12Q8WUD4 166 aaPredicted RBP20.18■□□□□ 0.82
IFFO1-201ENST00000336604 PCP11498 1178 aaKnown RBP20.18■□□□□ 0.82
IFFO1-201ENST00000336604 SCG2P13521 617 aa20.18■□□□□ 0.82
IFFO1-201ENST00000336604 CASP14P31944 242 aa20.18■□□□□ 0.82
IFFO1-201ENST00000336604 CT47A1Q5JQC4 288 aaPredicted RBP20.18■□□□□ 0.82
IFFO1-201ENST00000336604 CDC25AP30304 524 aa20.17■□□□□ 0.82
IFFO1-201ENST00000336604 CYP2C19P33261 490 aa20.17■□□□□ 0.82
IFFO1-201ENST00000336604 TEX35Q5T0J7 233 aa20.17■□□□□ 0.82
IFFO1-201ENST00000336604 ADGRG1Q9Y653 693 aa20.17■□□□□ 0.82
IFFO1-201ENST00000336604 MFAP3LO75121 409 aa20.17■□□□□ 0.82
IFFO1-201ENST00000336604 IQUBQ8NA54 791 aa20.17■□□□□ 0.82
IFFO1-201ENST00000336604 CDCA7Q9BWT1 371 aaPredicted RBP20.17■□□□□ 0.82
IFFO1-201ENST00000336604 LAMB2P55268 1798 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 GYPCP04921 128 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 FXR1P51114 621 aaKnown RBP eCLIP20.16■□□□□ 0.82
IFFO1-201ENST00000336604 CLEC4GQ6UXB4 293 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 FBXO33Q7Z6M2 555 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 CTAGE1Q96RT6 745 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 ORC4O43929 436 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 PLA2G4AP47712 749 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 PDXDC2PQ6P474 469 aa20.16■□□□□ 0.82
IFFO1-201ENST00000336604 TSPY2A6NKD2 308 aa20.15■□□□□ 0.82
IFFO1-201ENST00000336604 FILIP1LQ4L180 1135 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms